LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-155-5p

ENST00000623644

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Gene
miRNA
Score
DIANA Links
chr22-38_28785274-29006793.1
hsa-miR-155-5p
1.000
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000623644
Biotype: lincRNA
Gene id: ENSG00000279978
Gene Name: chr22-38_28785274-29006793.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-155-5p
Sequence: uuaaugcuaaucgugauaggggu
MirBase ID: MIMAT0000646
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
149244-149269
0.032
7
8mer
199857-199874
0.013
1
7mer
123820-123834
0.010
9
8mer
202211-202232
0.010
Not Conserved
8mer
13618-13631
0.009
0
8mer
106423-106438
0.008
0
8mer
238501-238517
0.007
0
7mer
94066-94080
0.007
3
7mer
136985-137005
0.005
1
7mer
10879-10901
0.005
1
7mer
3193-3220
0.005
1
8mer
28222-28239
0.005
1
7mer
36256-36274
0.005
Not Conserved
7mer
23010-23031
0.005
1
7mer
118445-118467
0.005
1
7mer
163015-163029
0.004
0
7mer
57784-57809
0.004
4
7mer
130478-130494
0.004
1
8mer
95772-95795
0.004
1
7mer
251301-251323
0.004
0
7mer
192315-192327
0.003
1
6mer
114164-114187
0.003
8
6mer
254609-254617
0.003
9
7mer
57364-57387
0.003
0
6mer
150011-150036
0.003
9
7mer
48464-48490
0.003
0
7mer
229765-229782
0.003
0
6mer
186531-186550
0.003
5
6mer
23485-23505
0.003
4
6mer
254319-254333
0.003
4
7mer
79625-79643
0.003
0
6mer
70408-70428
0.002
1
6mer
194831-194841
0.002
2
6mer
58850-58873
0.002
6
6mer
70090-70108
0.002
3
6mer
177372-177398
0.002
3
6mer
4277-4304
0.002
0
7mer
245227-245238
0.002
0
6mer
35983-36010
0.002
1
6mer
178955-178972
0.002
0
7mer
89690-89711
0.002
1
6mer
151821-151839
0.002
1
6mer
73465-73485
0.002
1
6mer
31116-31132
0.002
3
6mer
166267-166284
0.002
4
6mer
180263-180288
0.002
3
6mer
88030-88040
0.002
1
6mer
47800-47821
0.002
6
6mer
91707-91719
0.002
0
6mer
33532-33547
0.002
4
6mer
98570-98586
0.002
3
6mer
248857-248873
0.002
0
6mer
123592-123607
0.002
5
6mer
59214-59233
0.002
2
6mer
79610-79620
0.002
1
6mer
89454-89479
0.002
1
6mer
92762-92789
0.002
1
6mer
200195-200209
0.002
1
6mer
9506-9532
0.002
4
6mer
1347-1365
0.002
1
6mer
146159-146186
0.002
2
6mer
131437-131462
0.001
1
6mer
44370-44391
0.001
2
6mer
86902-86926
0.001
0
6mer
57472-57492
0.001
5
6mer
225406-225425
0.001
0
6mer
210339-210359
0.001
2
6mer
11408-11419
0.001
Not Conserved
6mer
105188-105210
0.001
1
6mer
257448-257459
0.001
1
6mer
118669-118691
0.001
1
7mer
242733-242752
0.001
0
6mer
221029-221054
0.001
2
6mer
3269-3291
0.001
7
6mer
245163-245182
0.001
0
6mer
150865-150891
0.001
0
6mer
93331-93350
0.001
0
6mer
244702-244719
0.001
0
6mer
248994-249020
0.001
0
6mer
151847-151858
0.001
0
6mer
57543-57568
0.001
3
6mer
192356-192370
0.001
1
6mer
119068-119083
0.001
2
6mer
33631-33652
0.001
0
6mer
118482-118503
0.000
1
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