LncBase Predicted v.2
Help
Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
Bulk download:
We have updated the bulk download module, which simplifies the download process! Please find the new online form by following this link
Deprecated!
This version is deprecated. Users are strongly advised to only use the latest, up-to-date versions of DIANA-Tools and Databases.
Please follow this link to navigate to the latest database version.

hsa-miR-155-5p


or   Search by location
Loading... Please wait, this might take a few seconds...



Go to Experimental module
Filters

Gene
miRNA
Score
DIANA Links
AC097467.2
hsa-miR-155-5p
0.940
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000417474
Biotype: antisense
Gene id: ENSG00000250910
Gene Name: AC097467.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-155-5p
Sequence: uuaaugcuaaucgugauaggggu
MirBase ID: MIMAT0000646
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
403-430
0.052
1
6mer
210-229
0.004
1
RP11-317J19.1
hsa-miR-155-5p
0.938
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000524610
Biotype: antisense
Gene id: ENSG00000254733
Gene Name: RP11-317J19.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-155-5p
Sequence: uuaaugcuaaucgugauaggggu
MirBase ID: MIMAT0000646
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
56-82
0.055
3
LOC102659288
hsa-miR-155-5p
0.938
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: NR_110015.1
Biotype: lincRNA
Gene id: NR_110015.1 (gene)
Gene Name: LOC102659288
UCSC graphic: -
Expression: -


miRNA Details
Name: hsa-miR-155-5p
Sequence: uuaaugcuaaucgugauaggggu
MirBase ID: MIMAT0000646
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
412-438
0.027
9
7mer
998-1019
0.018
1
6mer
1270-1296
0.007
1
6mer
323-344
0.003
2
LINC00342
hsa-miR-155-5p
0.937
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: NR_103734.1
Biotype: lincRNA
Gene id: NR_103734.1 (gene)
Gene Name: LINC00342
UCSC graphic: -
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant
LCLBACD2 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-155-5p
Sequence: uuaaugcuaaucgugauaggggu
MirBase ID: MIMAT0000646
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
31-53
0.053
0
6mer
2085-2104
0.002
0
XLOC_002925
hsa-miR-155-5p
0.937
mTTBlnEmP

Gene Details
Chromosome: chr3
Transcript: TCONS_00006314
Biotype: transcript isomorph
Gene id: XLOC_002925
Gene Name: XLOC_002925
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary
- Breast Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
Fibroblasts Lung Normal/Primary
- Lung Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-155-5p
Sequence: uuaaugcuaaucgugauaggggu
MirBase ID: MIMAT0000646
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1795-1817
0.040
2
7mer
1724-1734
0.012
2
6mer
1025-1044
0.003
0
RP11-108P20.1
hsa-miR-155-5p
0.936
mTTBlnEmP

Gene Details
Chromosome: 18
Transcript: ENST00000592021
Biotype: lincRNA
Gene id: ENSG00000267010
Gene Name: RP11-108P20.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-155-5p
Sequence: uuaaugcuaaucgugauaggggu
MirBase ID: MIMAT0000646
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
715-742
0.055
2
RP11-299H22.6
hsa-miR-155-5p
0.936
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000568092
Biotype: lincRNA
Gene id: ENSG00000261296
Gene Name: RP11-299H22.6
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-155-5p
Sequence: uuaaugcuaaucgugauaggggu
MirBase ID: MIMAT0000646
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
710-724
0.053
1
6mer
833-858
0.002
Not Conserved
AP001372.2
hsa-miR-155-5p
0.936
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000612462
Biotype: lincRNA
Gene id: ENSG00000254837
Gene Name: AP001372.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-155-5p
Sequence: uuaaugcuaaucgugauaggggu
MirBase ID: MIMAT0000646
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
283-292
0.037
0
6mer
744-768
0.017
0
C11orf97
hsa-miR-155-5p
0.936
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000542198
Biotype: lincRNA
Gene id: ENSG00000257057
Gene Name: C11orf97
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-155-5p
Sequence: uuaaugcuaaucgugauaggggu
MirBase ID: MIMAT0000646
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
202-225
0.042
5
6mer
158-183
0.007
3
6mer
335-350
0.005
1
LINC00664
hsa-miR-155-5p
0.935
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000596718
Biotype: lincRNA
Gene id: ENSG00000268658
Gene Name: LINC00664
UCSC graphic:
Expression:
  Cell Line Tissue Category
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor


miRNA Details
Name: hsa-miR-155-5p
Sequence: uuaaugcuaaucgugauaggggu
MirBase ID: MIMAT0000646
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2803-2822
0.048
1
6mer
2702-2727
0.006
1
XLOC_000964
hsa-miR-155-5p
0.935
mTTBlnEmP

Gene Details
Chromosome: chr1
Transcript: TCONS_00001629
Biotype: transcript isomorph
Gene id: XLOC_000964
Gene Name: XLOC_000964
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-155-5p
Sequence: uuaaugcuaaucgugauaggggu
MirBase ID: MIMAT0000646
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2185-2209
0.033
4
6mer
312-331
0.012
9
8mer
1582-1601
0.010
1
MIR99AHG
hsa-miR-155-5p
0.935
mTTBlnEmP

Gene Details
Chromosome: 21
Transcript: ENST00000619222
Biotype: lincRNA
Gene id: ENSG00000215386
Gene Name: MIR99AHG
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
- Brain Normal/Primary
- Breast Normal/Primary
HeLa Cervix Cancer/Malignant
- Colon Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
A549 Lung Cancer/Malignant
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-155-5p
Sequence: uuaaugcuaaucgugauaggggu
MirBase ID: MIMAT0000646
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2920-2946
0.051
5
6mer
844-858
0.003
1
AC008067.2
hsa-miR-155-5p
0.934
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000596783
Biotype: antisense
Gene id: ENSG00000237031
Gene Name: AC008067.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-155-5p
Sequence: uuaaugcuaaucgugauaggggu
MirBase ID: MIMAT0000646
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
398-418
0.054
9
AC159540.1
hsa-miR-155-5p
0.933
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: NR_103733.1
Biotype: lincRNA
Gene id: NR_103733.1 (gene)
Gene Name: AC159540.1
UCSC graphic: -
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-155-5p
Sequence: uuaaugcuaaucgugauaggggu
MirBase ID: MIMAT0000646
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
664-686
0.054
0
XLOC_011949
hsa-miR-155-5p
0.931
mTTBlnEmP

Gene Details
Chromosome: chr16
Transcript: TCONS_00024661
Biotype: transcript isomorph
Gene id: XLOC_011949
Gene Name: XLOC_011949
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Breast Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
A549 Lung Cancer/Malignant
- Lung Normal/Primary
- Ovary Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-155-5p
Sequence: uuaaugcuaaucgugauaggggu
MirBase ID: MIMAT0000646
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1134-1161
0.053
12
XLOC_002498
hsa-miR-155-5p
0.930
mTTBlnEmP

Gene Details
Chromosome: chr2
Transcript: TCONS_00004594
Biotype: transcript isomorph
Gene id: XLOC_002498
Gene Name: XLOC_002498
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary
- Heart Normal/Primary
- Ovary Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-155-5p
Sequence: uuaaugcuaaucgugauaggggu
MirBase ID: MIMAT0000646
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
6177-6200
0.036
2
6mer
6170-6192
0.005
2
7mer
3354-3368
0.004
1
7mer
1185-1205
0.003
1
6mer
2852-2871
0.002
1
6mer
4622-4646
0.002
1
6mer
2693-2720
0.001
2
6mer
2807-2830
0.001
0
AC073043.1
hsa-miR-155-5p
0.929
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000593967
Biotype: lincRNA
Gene id: ENSG00000232732
Gene Name: AC073043.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
HeLa Cervix Cancer/Malignant
LCLBACD2 - Normal/Primary


miRNA Details
Name: hsa-miR-155-5p
Sequence: uuaaugcuaaucgugauaggggu
MirBase ID: MIMAT0000646
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
314-333
0.053
4
AC159540.1
hsa-miR-155-5p
0.929
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: NR_103732.1
Biotype: lincRNA
Gene id: NR_103732.1 (gene)
Gene Name: AC159540.1
UCSC graphic: -
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-155-5p
Sequence: uuaaugcuaaucgugauaggggu
MirBase ID: MIMAT0000646
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
453-475
0.053
0
CTBP1-AS2
hsa-miR-155-5p
0.929
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000581398
Biotype: antisense
Gene id: ENSG00000196810
Gene Name: CTBP1-AS2
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-155-5p
Sequence: uuaaugcuaaucgugauaggggu
MirBase ID: MIMAT0000646
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
4974-4989
0.034
1
6mer
5636-5649
0.009
1
7mer
2323-2344
0.005
0
6mer
4336-4358
0.004
1
6mer
1301-1319
0.001
0
CASC8
hsa-miR-155-5p
0.928
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000502082
Biotype: antisense
Gene id: ENSG00000246228
Gene Name: CASC8
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-155-5p
Sequence: uuaaugcuaaucgugauaggggu
MirBase ID: MIMAT0000646
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
1049-1067
0.049
1
6mer
496-510
0.003
0
Funded by:
We have placed cookies on your device to help make this website and the services we offer better. By using this site, you agree to the use of cookies. Learn more
I accept