LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-150-5p


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Gene
miRNA
Score
DIANA Links
RP1-193H18.2
hsa-miR-150-5p
0.948
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000588041
Biotype: lincRNA
Gene id: ENSG00000267194
Gene Name: RP1-193H18.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2097-2103
0.058
4
RP11-678G14.2
hsa-miR-150-5p
0.947
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000594564
Biotype: antisense
Gene id: ENSG00000268081
Gene Name: RP11-678G14.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
357-379
0.058
0
LINC00303
hsa-miR-150-5p
0.947
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000427799
Biotype: lincRNA
Gene id: ENSG00000176754
Gene Name: LINC00303
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
873-895
0.050
5
6mer
184-203
0.005
4
6mer
392-396
0.003
0
RP11-108E14.1
hsa-miR-150-5p
0.946
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000517706
Biotype: lincRNA
Gene id: ENSG00000253300
Gene Name: RP11-108E14.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
644-667
0.024
6
7mer
188-208
0.019
1
7mer
675-694
0.011
1
6mer
117-121
0.004
1
LINC00303
hsa-miR-150-5p
0.946
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000418245
Biotype: lincRNA
Gene id: ENSG00000176754
Gene Name: LINC00303
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
962-984
0.050
5
6mer
184-203
0.005
4
6mer
392-396
0.003
0
XLOC_006931
hsa-miR-150-5p
0.946
mTTBlnEmP

Gene Details
Chromosome: chr8
Transcript: TCONS_00014863
Biotype: transcript isomorph
Gene id: XLOC_006931
Gene Name: XLOC_006931
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Kidney Normal/Primary
Fibroblasts Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
617-641
0.058
1
XLOC_001164
hsa-miR-150-5p
0.946
mTTBlnEmP

Gene Details
Chromosome: chr1
Transcript: TCONS_00000114
Biotype: transcript isomorph
Gene id: XLOC_001164
Gene Name: XLOC_001164
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1930-1952
0.050
5
6mer
671-690
0.003
4
6mer
1893-1912
0.003
0
6mer
879-883
0.002
0
RP11-404F10.2
hsa-miR-150-5p
0.945
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000443928
Biotype: antisense
Gene id: ENSG00000228863
Gene Name: RP11-404F10.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
31-46
0.040
2
7mer
439-464
0.017
2
FAM201A
hsa-miR-150-5p
0.944
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000484285
Biotype: antisense
Gene id: ENSG00000204860
Gene Name: FAM201A
UCSC graphic:
Expression:
  Cell Line Tissue Category
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
240-264
0.022
1
6mer
225-246
0.013
1
6mer
1188-1192
0.010
1
8mer
1115-1139
0.008
0
6mer
1083-1109
0.005
1
RP11-18F14.4
hsa-miR-150-5p
0.943
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000563684
Biotype: sense_intronic
Gene id: ENSG00000260064
Gene Name: RP11-18F14.4
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
573-591
0.054
2
6mer
566-591
0.003
1
RP11-88I18.2
hsa-miR-150-5p
0.943
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000590767
Biotype: antisense
Gene id: ENSG00000233178
Gene Name: RP11-88I18.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
A549 Lung Cancer/Malignant
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
238-261
0.026
1
7mer
2384-2396
0.014
1
7mer
2456-2469
0.012
0
6mer
136-162
0.005
2
RP11-81H3.2
hsa-miR-150-5p
0.942
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000551210
Biotype: lincRNA
Gene id: ENSG00000251138
Gene Name: RP11-81H3.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
327-348
0.047
1
7mer
377-403
0.009
0
XLOC_002639
hsa-miR-150-5p
0.942
mTTBlnEmP

Gene Details
Chromosome: chr3
Transcript: TCONS_00006013
Biotype: transcript isomorph
Gene id: XLOC_002639
Gene Name: XLOC_002639
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
553-572
0.035
0
9mer
327-345
0.015
1
7mer
1793-1815
0.006
0
6mer
838-857
0.002
1
FAM138F
hsa-miR-150-5p
0.942
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: NR_026820.1
Biotype: lincRNA
Gene id: NR_026820.1 (gene)
Gene Name: FAM138F
UCSC graphic: -
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
847-869
0.051
3
6mer
84-104
0.003
Not Conserved
6mer
212-237
0.001
Not Conserved
XLOC_013189
hsa-miR-150-5p
0.942
mTTBlnEmP

Gene Details
Chromosome: chr19
Transcript: TCONS_00026758
Biotype: transcript isomorph
Gene id: XLOC_013189
Gene Name: XLOC_013189
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Colon Normal/Primary
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
- Kidney Normal/Primary
Fibroblasts Lung Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
846-868
0.051
3
6mer
83-103
0.003
Not Conserved
6mer
211-236
0.001
Not Conserved
RP11-1C8.5
hsa-miR-150-5p
0.941
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000562917
Biotype: lincRNA
Gene id: ENSG00000261670
Gene Name: RP11-1C8.5
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
200-222
0.046
1
8mer
1591-1597
0.010
0
FAM226B
hsa-miR-150-5p
0.941
mTTBlnEmP

Gene Details
Chromosome: X
Transcript: NR_026594.1
Biotype: sense
Gene id: NR_026594.1 (gene)
Gene Name: FAM226B
UCSC graphic: -
Expression:
  Cell Line Tissue Category
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1777-1801
0.049
1
6mer
804-831
0.005
3
6mer
291-317
0.002
0
RP1-118J21.5
hsa-miR-150-5p
0.941
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000418255
Biotype: antisense
Gene id: ENSG00000236546
Gene Name: RP1-118J21.5
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
559-577
0.044
2
7mer
33-53
0.012
3
GABPB1-AS1
hsa-miR-150-5p
0.940
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000499624
Biotype: antisense
Gene id: ENSG00000244879
Gene Name: GABPB1-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD1 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
987-1001
0.027
1
7mer
13406-13423
0.004
1
7mer
5624-5649
0.003
1
7mer
12028-12038
0.003
1
7mer
14319-14344
0.002
1
7mer
1425-1436
0.002
1
7mer
12611-12621
0.002
1
7mer
13818-13828
0.002
0
7mer
2028-2038
0.002
0
6mer
14833-14858
0.001
1
6mer
1011-1030
0.001
0
7mer
13513-13523
0.001
1
7mer
14455-14480
0.001
0
6mer
3298-3314
0.001
0
6mer
9937-9954
0.001
3
6mer
14873-14890
0.001
1
FAM138F
hsa-miR-150-5p
0.940
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000448235
Biotype: lincRNA
Gene id: ENSG00000233630
Gene Name: FAM138F
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
904-926
0.052
3
6mer
141-161
0.003
Not Conserved
6mer
269-294
0.001
Not Conserved
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