LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-150-5p


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Gene
miRNA
Score
DIANA Links
THTPA
hsa-miR-150-5p
0.954
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000554403
Biotype: retained_intron
Gene id: ENSG00000157306
Gene Name: THTPA
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD3 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
841-867
0.025
4
6mer
181-199
0.006
7
6mer
283-306
0.006
7
7mer
2252-2262
0.006
0
6mer
326-351
0.004
2
6mer
618-633
0.004
3
6mer
2058-2080
0.003
1
6mer
195-217
0.003
2
6mer
204-222
0.003
4
6mer
345-370
0.002
1
XLOC_006439
hsa-miR-150-5p
0.954
mTTBlnEmP

Gene Details
Chromosome: chr7
Transcript: TCONS_00013799
Biotype: transcript isomorph
Gene id: XLOC_006439
Gene Name: XLOC_006439
UCSC graphic: -
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
172-195
0.060
0
RP11-70F11.8
hsa-miR-150-5p
0.954
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000549734
Biotype: lincRNA
Gene id: ENSG00000257771
Gene Name: RP11-70F11.8
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
- Lung Normal/Primary
- Testes Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
45-51
0.060
3
SEPT7-AS1
hsa-miR-150-5p
0.953
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000424194
Biotype: lincRNA
Gene id: ENSG00000228878
Gene Name: SEPT7-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
143-165
0.060
1
XLOC_004956
hsa-miR-150-5p
0.953
mTTBlnEmP

Gene Details
Chromosome: chr5
Transcript: TCONS_00009753
Biotype: transcript isomorph
Gene id: XLOC_004956
Gene Name: XLOC_004956
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
482-508
0.060
1
XLOC_008207
hsa-miR-150-5p
0.953
mTTBlnEmP

Gene Details
Chromosome: chrX
Transcript: TCONS_00017361
Biotype: transcript isomorph
Gene id: XLOC_008207
Gene Name: XLOC_008207
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary
- Colon Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
Fibroblasts Lung Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
80-97
0.056
7
6mer
4250-4269
0.004
1
LINC00680
hsa-miR-150-5p
0.952
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000422882
Biotype: lincRNA
Gene id: ENSG00000215190
Gene Name: LINC00680
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1933-1955
0.031
0
7mer
1414-1427
0.012
0
6mer
676-701
0.010
0
6mer
1458-1480
0.007
0
RP6-24A23.7
hsa-miR-150-5p
0.951
mTTBlnEmP

Gene Details
Chromosome: X
Transcript: ENST00000564206
Biotype: sense_overlapping
Gene id: ENSG00000261409
Gene Name: RP6-24A23.7
UCSC graphic:
Expression:
  Cell Line Tissue Category
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
103-120
0.055
7
6mer
4751-4770
0.004
1
XLOC_000648
hsa-miR-150-5p
0.951
mTTBlnEmP

Gene Details
Chromosome: chr1
Transcript: TCONS_00001360
Biotype: transcript isomorph
Gene id: XLOC_000648
Gene Name: XLOC_000648
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Brain Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1660-1674
0.051
1
6mer
903-929
0.008
1
CYP4F35P
hsa-miR-150-5p
0.951
mTTBlnEmP

Gene Details
Chromosome: 18
Transcript: ENST00000582957
Biotype: lincRNA
Gene id: ENSG00000265787
Gene Name: CYP4F35P
UCSC graphic:
Expression:
  Cell Line Tissue Category
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
2507-2533
0.028
0
7mer
267-294
0.014
0
7mer
429-455
0.011
0
6mer
184-201
0.006
0
CTA-292E10.9
hsa-miR-150-5p
0.951
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000623127
Biotype: antisense
Gene id: ENSG00000280111
Gene Name: CTA-292E10.9
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
18148-18175
0.014
2
7mer
21672-21689
0.008
1
7mer
9177-9195
0.005
0
7mer
2715-2737
0.005
4
8mer
17946-17953
0.004
2
7mer
13159-13184
0.003
1
7mer
6793-6804
0.003
1
7mer
19768-19788
0.002
0
7mer
20052-20077
0.002
0
6mer
11261-11285
0.002
7
7mer
18925-18935
0.002
0
7mer
20528-20541
0.002
0
6mer
15234-15238
0.001
1
6mer
4008-4027
0.001
0
6mer
11813-11840
0.001
1
6mer
20863-20885
0.001
0
6mer
13315-13334
0.001
1
6mer
19077-19102
0.001
0
6mer
20608-20633
0.001
0
6mer
13327-13353
0.000
1
RP11-491F9.5
hsa-miR-150-5p
0.951
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000564048
Biotype: lincRNA
Gene id: ENSG00000260769
Gene Name: RP11-491F9.5
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1737-1757
0.057
8
6mer
844-848
0.002
0
LOC388692
hsa-miR-150-5p
0.951
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: NR_027002.1
Biotype: lincRNA
Gene id: NR_027002.1 (gene)
Gene Name: LOC388692
UCSC graphic: -
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
295-320
0.015
Not Conserved
7mer
902-923
0.008
1
8mer
1582-1595
0.005
1
7mer
6794-6804
0.005
1
8mer
11603-11616
0.004
1
6mer
116-137
0.004
1
7mer
3916-3926
0.002
0
6mer
11368-11392
0.002
2
9mer
8789-8813
0.002
0
6mer
3091-3105
0.002
2
6mer
11533-11549
0.002
0
6mer
2922-2946
0.001
1
7mer
5819-5829
0.001
1
6mer
5564-5582
0.001
0
6mer
10208-10225
0.001
0
6mer
2059-2086
0.001
1
6mer
1950-1971
0.001
0
6mer
3100-3125
0.000
0
6mer
5574-5596
0.000
0
RP11-81H3.2
hsa-miR-150-5p
0.950
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000515416
Biotype: lincRNA
Gene id: ENSG00000251138
Gene Name: RP11-81H3.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
736-757
0.022
1
7mer
256-282
0.017
0
7mer
359-373
0.008
0
6mer
141-157
0.006
0
7mer
786-812
0.005
0
LINC01121
hsa-miR-150-5p
0.950
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000378479
Biotype: lincRNA
Gene id: ENSG00000205054
Gene Name: LINC01121
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Breast Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
259-276
0.059
6
FAM27B
hsa-miR-150-5p
0.949
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: NR_027422.1
Biotype: lincRNA
Gene id: NR_027422.1 (gene)
Gene Name: FAM27B
UCSC graphic: -
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
150-172
0.047
0
6mer
379-399
0.012
0
RP11-70F11.8
hsa-miR-150-5p
0.949
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000546821
Biotype: lincRNA
Gene id: ENSG00000257771
Gene Name: RP11-70F11.8
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
- Lung Normal/Primary
- Testes Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
72-78
0.054
3
6mer
908-927
0.002
0
6mer
1101-1126
0.001
1
6mer
2115-2137
0.001
0
6mer
1130-1156
0.001
1
RP1-5O6.6
hsa-miR-150-5p
0.949
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000624867
Biotype: sense_intronic
Gene id: ENSG00000279038
Gene Name: RP1-5O6.6
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
204-229
0.013
1
8mer
809-832
0.012
Not Conserved
7mer
352-362
0.007
1
7mer
4774-4799
0.004
1
7mer
3324-3350
0.004
0
6mer
73-99
0.004
1
7mer
771-794
0.003
0
7mer
4101-4111
0.003
1
7mer
4911-4937
0.002
0
7mer
3934-3949
0.002
0
7mer
3199-3224
0.002
1
6mer
1448-1470
0.002
1
7mer
3884-3899
0.001
1
6mer
1395-1414
0.001
1
RP11-115J16.1
hsa-miR-150-5p
0.948
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000520390
Biotype: lincRNA
Gene id: ENSG00000254235
Gene Name: RP11-115J16.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
3389-3416
0.025
1
7mer
3211-3227
0.013
1
7mer
2368-2395
0.010
1
7mer
2779-2801
0.007
0
6mer
415-434
0.002
Not Conserved
XLOC_009529
hsa-miR-150-5p
0.948
mTTBlnEmP

Gene Details
Chromosome: chr11
Transcript: TCONS_00019737
Biotype: transcript isomorph
Gene id: XLOC_009529
Gene Name: XLOC_009529
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
217-244
0.058
1
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