LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-150-5p


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Gene
miRNA
Score
DIANA Links
XLOC_013278
hsa-miR-150-5p
0.959
mTTBlnEmP

Gene Details
Chromosome: chr19
Transcript: TCONS_00027248
Biotype: transcript isomorph
Gene id: XLOC_013278
Gene Name: XLOC_013278
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary
- Colon Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
258-274
0.038
0
6mer
267-294
0.012
0
6mer
522-544
0.010
0
6mer
175-197
0.002
Not Conserved
XLOC_003474
hsa-miR-150-5p
0.959
mTTBlnEmP

Gene Details
Chromosome: chr4
Transcript: TCONS_00008010
Biotype: transcript isomorph
Gene id: XLOC_003474
Gene Name: XLOC_003474
UCSC graphic: -
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
- Colon Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Lung Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
169-192
0.053
4
7mer
222-243
0.006
1
6mer
447-472
0.004
2
AC009133.17
hsa-miR-150-5p
0.959
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000565600
Biotype: antisense
Gene id: ENSG00000260719
Gene Name: AC009133.17
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1129-1156
0.037
1
7mer
1502-1512
0.010
0
8mer
700-710
0.009
0
7mer
727-749
0.003
0
6mer
998-1023
0.002
1
FAM27L
hsa-miR-150-5p
0.959
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000426869
Biotype: lincRNA
Gene id: ENSG00000178130
Gene Name: FAM27L
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
432-449
0.050
1
6mer
649-670
0.012
1
LOC102467216
hsa-miR-150-5p
0.958
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: NR_104673.1
Biotype: lincRNA
Gene id: NR_104673.1 (gene)
Gene Name: LOC102467216
UCSC graphic: -
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
369-395
0.062
1
LL22NC03-86G7.1
hsa-miR-150-5p
0.958
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000458178
Biotype: antisense
Gene id: ENSG00000224086
Gene Name: LL22NC03-86G7.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
37485-37511
0.005
1
7mer
8819-8843
0.005
1
7mer
37619-37646
0.005
0
7mer
33760-33779
0.004
3
7mer
15709-15734
0.004
1
8mer
29695-29718
0.003
0
8mer
23119-23143
0.003
1
7mer
25824-25849
0.002
1
7mer
2677-2694
0.002
1
6mer
19687-19712
0.002
3
6mer
7711-7731
0.002
1
6mer
13557-13583
0.002
0
6mer
24241-24257
0.002
3
6mer
31269-31291
0.001
2
6mer
23293-23316
0.001
1
6mer
20481-20492
0.001
2
6mer
4553-4566
0.001
1
6mer
27700-27720
0.001
0
6mer
28020-28037
0.001
2
6mer
25996-26013
0.001
0
6mer
17801-17825
0.001
2
7mer
9795-9819
0.001
1
6mer
17127-17150
0.001
2
6mer
33232-33252
0.001
1
6mer
30369-30389
0.001
2
6mer
16774-16797
0.001
1
6mer
7136-7152
0.001
Not Conserved
6mer
23460-23486
0.001
1
6mer
23821-23848
0.001
1
6mer
30044-30070
0.001
1
6mer
8643-8668
0.001
2
7mer
12508-12523
0.001
0
6mer
9679-9702
0.001
1
6mer
31940-31966
0.001
1
6mer
27537-27558
0.001
Not Conserved
6mer
9933-9947
0.001
2
6mer
17154-17174
0.000
Not Conserved
HS6ST2-AS1
hsa-miR-150-5p
0.958
mTTBlnEmP

Gene Details
Chromosome: X
Transcript: ENST00000455269
Biotype: antisense
Gene id: ENSG00000235849
Gene Name: HS6ST2-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
298-318
0.062
5
RP11-755B10.3
hsa-miR-150-5p
0.957
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000465933
Biotype: lincRNA
Gene id: ENSG00000241933
Gene Name: RP11-755B10.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
2820-2842
0.030
1
7mer
2813-2829
0.008
1
7mer
2683-2693
0.006
1
7mer
2370-2392
0.005
1
7mer
2502-2527
0.005
1
8mer
1362-1387
0.003
1
6mer
2188-2202
0.003
0
6mer
2594-2619
0.003
1
RP3-340N1.2
hsa-miR-150-5p
0.957
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000431027
Biotype: lincRNA
Gene id: ENSG00000227066
Gene Name: RP3-340N1.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
71-96
0.041
0
6mer
498-518
0.011
1
6mer
1704-1720
0.009
1
CTD-2332E11.2
hsa-miR-150-5p
0.957
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000598116
Biotype: lincRNA
Gene id: ENSG00000268560
Gene Name: CTD-2332E11.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
152-176
0.054
0
6mer
169-196
0.008
0
XLOC_005737
hsa-miR-150-5p
0.957
mTTBlnEmP

Gene Details
Chromosome: chr6
Transcript: TCONS_00011496
Biotype: transcript isomorph
Gene id: XLOC_005737
Gene Name: XLOC_005737
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Ovary Normal/Primary
- Testes Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
524-549
0.044
6
8mer
1775-1800
0.006
1
6mer
320-325
0.006
5
7mer
2491-2505
0.002
1
7mer
2344-2350
0.002
1
6mer
2460-2474
0.001
0
LINC00664
hsa-miR-150-5p
0.957
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000596203
Biotype: lincRNA
Gene id: ENSG00000268658
Gene Name: LINC00664
UCSC graphic:
Expression:
  Cell Line Tissue Category
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1365-1375
0.027
1
7mer
1062-1072
0.025
1
6mer
1574-1599
0.009
1
SDCBP2-AS1
hsa-miR-150-5p
0.956
mTTBlnEmP

Gene Details
Chromosome: 20
Transcript: ENST00000607947
Biotype: antisense
Gene id: ENSG00000234684
Gene Name: SDCBP2-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
335-358
0.057
1
6mer
475-495
0.004
1
RP1-309I22.2
hsa-miR-150-5p
0.956
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000624184
Biotype: sense_overlapping
Gene id: ENSG00000279338
Gene Name: RP1-309I22.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
5972-5988
0.007
1
7mer
6825-6849
0.005
1
7mer
12342-12367
0.005
3
7mer
2577-2602
0.005
3
7mer
5562-5579
0.004
0
7mer
25632-25657
0.004
2
7mer
25517-25529
0.003
0
9mer
13890-13908
0.002
1
6mer
11809-11833
0.002
3
6mer
1115-1124
0.002
0
7mer
15788-15803
0.002
0
6mer
27663-27687
0.002
2
6mer
9661-9665
0.002
2
6mer
6197-6221
0.001
1
6mer
18078-18096
0.001
1
6mer
18262-18286
0.001
3
6mer
14579-14601
0.001
5
6mer
9156-9179
0.001
2
6mer
24621-24648
0.001
1
6mer
13842-13868
0.001
2
6mer
15447-15473
0.001
1
6mer
18706-18726
0.001
1
6mer
797-817
0.001
1
6mer
26006-26027
0.001
1
6mer
3850-3864
0.001
0
6mer
16284-16297
0.001
1
6mer
813-834
0.001
1
6mer
24003-24020
0.001
2
6mer
2596-2623
0.001
2
6mer
4976-5000
0.001
0
6mer
24636-24656
0.000
2
FAM66C
hsa-miR-150-5p
0.956
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000454799
Biotype: antisense
Gene id: ENSG00000226711
Gene Name: FAM66C
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1904-1929
0.033
1
7mer
2040-2062
0.010
0
6mer
856-879
0.009
1
7mer
1249-1262
0.009
0
LL22NC03-22D1.1
hsa-miR-150-5p
0.955
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000624601
Biotype: lincRNA
Gene id: ENSG00000279003
Gene Name: LL22NC03-22D1.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
295-307
0.011
1
8mer
23250-23264
0.010
Not Conserved
8mer
24346-24363
0.006
0
7mer
19390-19414
0.004
0
7mer
12477-12501
0.004
1
7mer
3893-3903
0.003
1
6mer
6541-6563
0.003
1
7mer
15663-15682
0.003
Not Conserved
6mer
5043-5068
0.002
3
6mer
5705-5731
0.002
2
6mer
15550-15555
0.002
2
6mer
4780-4789
0.002
1
6mer
8954-8964
0.002
1
6mer
21722-21745
0.001
1
6mer
9325-9347
0.001
1
6mer
16546-16558
0.001
0
6mer
11764-11778
0.001
0
6mer
26705-26732
0.001
1
6mer
4020-4042
0.001
1
6mer
10833-10852
0.001
1
6mer
16611-16625
0.000
1
RP11-420K14.8
hsa-miR-150-5p
0.955
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000593824
Biotype: lincRNA
Gene id: ENSG00000268184
Gene Name: RP11-420K14.8
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
14-38
0.061
0
JRKL-AS1
hsa-miR-150-5p
0.955
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000511243
Biotype: lincRNA
Gene id: ENSG00000255679
Gene Name: JRKL-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
347-374
0.056
1
6mer
213-230
0.005
3
RP11-66B24.7
hsa-miR-150-5p
0.954
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000593314
Biotype: processed_transcript
Gene id: ENSG00000272808
Gene Name: RP11-66B24.7
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
HeLa Cervix Cancer/Malignant
- Colon Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
101-123
0.052
9
6mer
304-331
0.004
5
6mer
533-560
0.004
1
XLOC_001621
hsa-miR-150-5p
0.954
mTTBlnEmP

Gene Details
Chromosome: chr2
Transcript: TCONS_00003817
Biotype: transcript isomorph
Gene id: XLOC_001621
Gene Name: XLOC_001621
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
179-204
0.023
0
7mer
1174-1184
0.020
1
6mer
2033-2050
0.014
1
6mer
1325-1351
0.004
0
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