LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-150-5p


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Gene
miRNA
Score
DIANA Links
RP11-395B7.7
hsa-miR-150-5p
0.967
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000564977
Biotype: sense_overlapping
Gene id: ENSG00000260336
Gene Name: RP11-395B7.7
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
273-299
0.041
2
7mer
3216-3242
0.015
1
7mer
2031-2053
0.004
0
7mer
3598-3619
0.004
0
6mer
1329-1351
0.002
0
6mer
1453-1467
0.001
0
RP11-397G17.1
hsa-miR-150-5p
0.966
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000415106
Biotype: lincRNA
Gene id: ENSG00000226733
Gene Name: RP11-397G17.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Kidney Normal/Primary
- Liver Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
503-524
0.061
1
6mer
252-270
0.004
1
SLC16A1-AS1
hsa-miR-150-5p
0.966
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000428411
Biotype: antisense
Gene id: ENSG00000226419
Gene Name: SLC16A1-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
3212-3234
0.021
0
7mer
385-410
0.008
1
8mer
3584-3597
0.006
0
7mer
5463-5473
0.003
1
7mer
2449-2474
0.003
1
6mer
123-140
0.003
1
7mer
2892-2917
0.002
1
6mer
936-956
0.002
2
6mer
4394-4405
0.002
1
7mer
6441-6451
0.002
0
7mer
7222-7244
0.002
0
7mer
7393-7418
0.002
1
7mer
2053-2063
0.002
0
6mer
5922-5945
0.002
1
7mer
2585-2608
0.002
1
7mer
6564-6587
0.002
0
6mer
1094-1110
0.001
0
8mer+mismatch
493-512
0.001
0
6mer
2206-2231
0.001
0
LINC01410
hsa-miR-150-5p
0.965
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000424345
Biotype: lincRNA
Gene id: ENSG00000238113
Gene Name: LINC01410
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
HepG2 Liver Cancer/Malignant


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
2477-2497
0.050
0
7mer
1755-1772
0.015
0
RP5-940J5.8
hsa-miR-150-5p
0.965
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000499202
Biotype: antisense
Gene id: ENSG00000245667
Gene Name: RP5-940J5.8
UCSC graphic:
Expression:
  Cell Line Tissue Category
LCLBAC - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
458-484
0.053
2
7mer
216-226
0.006
1
7mer
346-359
0.006
1
CTD-2336O2.1
hsa-miR-150-5p
0.965
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000518822
Biotype: antisense
Gene id: ENSG00000253982
Gene Name: CTD-2336O2.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant
LCLBACD2 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
369-392
0.065
1
FAM224A
hsa-miR-150-5p
0.965
mTTBlnEmP

Gene Details
Chromosome: Y
Transcript: ENST00000419557
Biotype: lincRNA
Gene id: ENSG00000233522
Gene Name: FAM224A
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1738-1748
0.036
0
7mer
1858-1883
0.029
0
XLOC_005410
hsa-miR-150-5p
0.964
mTTBlnEmP

Gene Details
Chromosome: chr6
Transcript: TCONS_00011909
Biotype: transcript isomorph
Gene id: XLOC_005410
Gene Name: XLOC_005410
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
31-54
0.057
5
7mer
188-208
0.008
1
RP11-218L14.4
hsa-miR-150-5p
0.964
mTTBlnEmP

Gene Details
Chromosome: X
Transcript: ENST00000447347
Biotype: antisense
Gene id: ENSG00000225393
Gene Name: RP11-218L14.4
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
290-310
0.026
1
7mer
18-32
0.021
1
6mer
214-232
0.009
1
6mer
505-519
0.008
1
RP11-6I2.4
hsa-miR-150-5p
0.964
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000522498
Biotype: lincRNA
Gene id: ENSG00000253115
Gene Name: RP11-6I2.4
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
Fibroblasts Lung Normal/Primary
- Lymph Node Normal/Primary
- Skeletal Muscle Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
186-202
0.039
1
8mer
291-314
0.025
1
MIR4435-1HG
hsa-miR-150-5p
0.964
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000603827
Biotype: lincRNA
Gene id: ENSG00000172965
Gene Name: MIR4435-1HG
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
288-308
0.033
6
8mer
1046-1059
0.028
2
6mer
826-841
0.003
3
XLOC_008094
hsa-miR-150-5p
0.964
mTTBlnEmP

Gene Details
Chromosome: chrX
Transcript: TCONS_00016944
Biotype: transcript isomorph
Gene id: XLOC_008094
Gene Name: XLOC_008094
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
- Liver Normal/Primary
Fibroblasts Lung Normal/Primary
- Lung Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
290-310
0.026
1
7mer
18-32
0.021
1
6mer
214-232
0.009
1
6mer
505-519
0.008
1
GRM5-AS1
hsa-miR-150-5p
0.963
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000526448
Biotype: antisense
Gene id: ENSG00000255082
Gene Name: GRM5-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
4054-4075
0.027
6
7mer
713-732
0.015
8
7mer
4411-4433
0.011
3
6mer
4589-4614
0.004
1
7mer
2108-2114
0.003
1
6mer
2468-2495
0.002
5
6mer
2043-2048
0.002
4
CECR7
hsa-miR-150-5p
0.962
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000414401
Biotype: lincRNA
Gene id: ENSG00000237438
Gene Name: CECR7
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
391-410
0.064
1
SAMD12-AS1
hsa-miR-150-5p
0.962
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: NR_038210.1
Biotype: antisense
Gene id: NR_038210.1 (gene)
Gene Name: SAMD12-AS1
UCSC graphic: -
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
438-455
0.063
4
FAM226B
hsa-miR-150-5p
0.961
mTTBlnEmP

Gene Details
Chromosome: X
Transcript: ENST00000602508
Biotype: sense_intronic
Gene id: ENSG00000269911
Gene Name: FAM226B
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1242-1266
0.054
1
6mer
269-296
0.009
3
GLG1
hsa-miR-150-5p
0.961
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000566788
Biotype: lincRNA
Gene id: ENSG00000260539
Gene Name: GLG1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
38-57
0.063
10
LINC00457
hsa-miR-150-5p
0.960
mTTBlnEmP

Gene Details
Chromosome: 13
Transcript: ENST00000428706
Biotype: lincRNA
Gene id: ENSG00000225179
Gene Name: LINC00457
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
376-400
0.063
4
FAM27C
hsa-miR-150-5p
0.960
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: NR_027421.1
Biotype: sense
Gene id: NR_027421.1 (gene)
Gene Name: FAM27C
UCSC graphic: -
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
442-464
0.045
0
6mer
671-691
0.017
0
TTTY14
hsa-miR-150-5p
0.960
mTTBlnEmP

Gene Details
Chromosome: Y
Transcript: ENST00000452584
Biotype: lincRNA
Gene id: ENSG00000176728
Gene Name: TTTY14
UCSC graphic:
Expression:
  Cell Line Tissue Category
HUVEC Blood Vessel Normal/Primary
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
760-779
0.037
2
8mer
603-623
0.021
0
6mer
571-594
0.004
0
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