LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-150-5p


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Gene
miRNA
Score
DIANA Links
FAM83A-AS1
hsa-miR-150-5p
0.976
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000517519
Biotype: antisense
Gene id: ENSG00000204949
Gene Name: FAM83A-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
331-356
0.067
2
6mer
873-877
0.005
1
RP11-219B17.2
hsa-miR-150-5p
0.976
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000558104
Biotype: antisense
Gene id: ENSG00000259482
Gene Name: RP11-219B17.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
311-333
0.071
2
RP5-1042I8.7
hsa-miR-150-5p
0.976
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000566949
Biotype: sense_overlapping
Gene id: ENSG00000261662
Gene Name: RP5-1042I8.7
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant
HREpiC Kidney Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
179-198
0.066
1
6mer
682-704
0.004
1
6mer
636-659
0.002
0
KIAA0087
hsa-miR-150-5p
0.976
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: NR_022006.1
Biotype: sense
Gene id: NR_022006.1 (gene)
Gene Name: KIAA0087
UCSC graphic: -
Expression:
  Cell Line Tissue Category
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
213-235
0.053
11
7mer
4036-4061
0.005
1
6mer
1856-1874
0.004
9
6mer
4051-4073
0.004
3
6mer
3406-3423
0.003
1
6mer
1733-1749
0.000
4
6mer
1719-1740
0.000
2
6mer
1729-1749
0.000
4
XLOC_000191
hsa-miR-150-5p
0.975
mTTBlnEmP

Gene Details
Chromosome: chr1
Transcript: TCONS_00000939
Biotype: transcript isomorph
Gene id: XLOC_000191
Gene Name: XLOC_000191
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1959-1971
0.030
1
7mer
1827-1837
0.026
1
6mer
1977-2004
0.015
1
LINC01505
hsa-miR-150-5p
0.975
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000411451
Biotype: lincRNA
Gene id: ENSG00000234229
Gene Name: LINC01505
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Breast Normal/Primary
- Colon Normal/Primary
- Heart Normal/Primary
- Lymph Node Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
211-231
0.048
3
7mer
31-54
0.012
0
6mer
222-247
0.011
9
RP11-14J7.6
hsa-miR-150-5p
0.973
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000554993
Biotype: antisense
Gene id: ENSG00000258573
Gene Name: RP11-14J7.6
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
52-78
0.051
3
7mer
874-888
0.008
1
7mer
558-583
0.006
1
6mer
1051-1068
0.002
1
6mer
1182-1197
0.002
1
CTD-2284J15.1
hsa-miR-150-5p
0.973
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000523218
Biotype: retained_intron
Gene id: ENSG00000254231
Gene Name: CTD-2284J15.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
HepG2 Liver Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
146-173
0.069
1
XLOC_002216
hsa-miR-150-5p
0.973
mTTBlnEmP

Gene Details
Chromosome: chr2
Transcript: TCONS_00004342
Biotype: transcript isomorph
Gene id: XLOC_002216
Gene Name: XLOC_002216
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
- Breast Normal/Primary
- Colon Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
- Ovary Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
17-21
0.015
1
7mer
59-78
0.015
0
6mer
317-340
0.013
1
6mer
119-142
0.012
1
8mer
359-379
0.008
Not Conserved
6mer
214-240
0.006
0
RP11-219B17.2
hsa-miR-150-5p
0.973
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000561413
Biotype: antisense
Gene id: ENSG00000259482
Gene Name: RP11-219B17.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
253-275
0.069
2
XLOC_002041
hsa-miR-150-5p
0.972
mTTBlnEmP

Gene Details
Chromosome: chr2
Transcript: TCONS_00004193
Biotype: transcript isomorph
Gene id: XLOC_002041
Gene Name: XLOC_002041
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary
- Heart Normal/Primary
- Lung Normal/Primary
- Ovary Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
1582-1605
0.039
1
8mer
909-928
0.015
1
7mer
1394-1416
0.009
3
6mer
418-440
0.004
0
6mer
1258-1280
0.003
2
RP13-497K6.1
hsa-miR-150-5p
0.972
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000506514
Biotype: antisense
Gene id: ENSG00000249453
Gene Name: RP13-497K6.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
32-55
0.058
4
7mer
85-106
0.007
1
6mer
202-227
0.003
2
SNHG14
hsa-miR-150-5p
0.971
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000546682
Biotype: antisense
Gene id: ENSG00000224078
Gene Name: SNHG14
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
353-378
0.026
1
8mer
1001-1025
0.010
0
7mer
8588-8598
0.010
1
8mer
871-897
0.010
0
7mer
754-774
0.006
0
6mer
3058-3081
0.003
3
6mer
1536-1563
0.001
1
AC025016.1
hsa-miR-150-5p
0.971
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000528915
Biotype: lincRNA
Gene id: ENSG00000255257
Gene Name: AC025016.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
384-411
0.066
0
6mer
202-219
0.002
Not Conserved
XLOC_010695
hsa-miR-150-5p
0.971
mTTBlnEmP

Gene Details
Chromosome: chr13
Transcript: TCONS_00022087
Biotype: transcript isomorph
Gene id: XLOC_010695
Gene Name: XLOC_010695
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary
Fibroblasts Lung Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1252-1266
0.068
13
RP3-418C23.2
hsa-miR-150-5p
0.970
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000574739
Biotype: lincRNA
Gene id: ENSG00000226684
Gene Name: RP3-418C23.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
337-361
0.067
7
LINC01121
hsa-miR-150-5p
0.970
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000413669
Biotype: lincRNA
Gene id: ENSG00000205054
Gene Name: LINC01121
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Breast Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
263-280
0.067
6
FAM83A-AS1
hsa-miR-150-5p
0.969
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000520576
Biotype: antisense
Gene id: ENSG00000204949
Gene Name: FAM83A-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
520-545
0.059
2
6mer
1062-1066
0.005
1
6mer
382-405
0.003
1
XLOC_005501
hsa-miR-150-5p
0.968
mTTBlnEmP

Gene Details
Chromosome: chr6
Transcript: TCONS_00012617
Biotype: transcript isomorph
Gene id: XLOC_005501
Gene Name: XLOC_005501
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Prostate Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1787-1797
0.039
1
6mer
730-756
0.009
1
6mer
1428-1454
0.008
1
6mer
1174-1201
0.007
1
7mer
637-663
0.003
Not Conserved
AC079466.1
hsa-miR-150-5p
0.967
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000587961
Biotype: lincRNA
Gene id: ENSG00000266976
Gene Name: AC079466.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
405-421
0.039
1
7mer
2864-2888
0.018
1
6mer
511-531
0.009
1
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