LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-150-5p


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Gene
miRNA
Score
DIANA Links
CTC-459F4.3
hsa-miR-150-5p
0.986
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000588784
Biotype: lincRNA
Gene id: ENSG00000267575
Gene Name: CTC-459F4.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
791-815
0.075
0
6mer
1166-1192
0.004
0
6mer
930-945
0.002
Not Conserved
CTD-2162K18.4
hsa-miR-150-5p
0.986
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000590750
Biotype: lincRNA
Gene id: ENSG00000267260
Gene Name: CTD-2162K18.4
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
148-160
0.027
0
8mer
1697-1721
0.025
0
7mer
1508-1520
0.018
0
6mer
1715-1740
0.004
0
8mer
627-647
0.004
0
8mer
604-625
0.003
Not Conserved
AP000962.2
hsa-miR-150-5p
0.985
mTTBlnEmP

Gene Details
Chromosome: 21
Transcript: ENST00000602654
Biotype: lincRNA
Gene id: ENSG00000269950
Gene Name: AP000962.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
291-309
0.073
1
7mer
566-588
0.007
1
AP000997.2
hsa-miR-150-5p
0.984
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000564619
Biotype: lincRNA
Gene id: ENSG00000260254
Gene Name: AP000997.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2085-2112
0.018
1
7mer
793-820
0.017
4
7mer
592-609
0.007
2
7mer
4766-4782
0.007
5
7mer
5455-5476
0.007
4
7mer
4138-4162
0.004
3
6mer
3625-3629
0.004
6
6mer
7335-7360
0.004
5
6mer
6516-6539
0.003
7
6mer
7958-7976
0.002
2
6mer
6154-6178
0.001
4
6mer
5829-5847
0.001
2
6mer
4815-4835
0.001
4
6mer
997-1020
0.001
0
6mer
7753-7776
0.001
Not Conserved
MIR6818
hsa-miR-150-5p
0.984
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000624945
Biotype: antisense
Gene id: ENSG00000279159
Gene Name: MIR6818
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
49124-49151
0.010
1
6mer
124-141
0.005
3
7mer
18385-18410
0.004
5
7mer
9104-9115
0.003
0
7mer
32393-32406
0.003
1
7mer
35667-35689
0.003
0
7mer
4943-4953
0.003
1
7mer
16017-16039
0.003
1
6mer
8198-8218
0.003
4
7mer
11890-11900
0.003
1
7mer
18043-18053
0.003
1
7mer
26702-26707
0.002
2
7mer
4487-4497
0.002
0
7mer
8047-8072
0.002
1
6mer
44493-44515
0.002
8
6mer
8500-8510
0.002
3
6mer
9269-9288
0.002
1
6mer
25472-25476
0.002
2
7mer
4474-4497
0.001
0
6mer
31503-31525
0.001
0
6mer
45343-45360
0.001
0
6mer
10172-10197
0.001
0
7mer
42890-42916
0.001
2
6mer
8924-8941
0.001
1
6mer
36858-36883
0.001
0
6mer
22805-22815
0.001
0
6mer
24968-24992
0.001
2
6mer
23882-23908
0.001
1
6mer
35806-35825
0.001
0
6mer
8730-8756
0.001
Not Conserved
6mer
7822-7839
0.001
Not Conserved
6mer
38127-38148
0.001
1
6mer
38478-38490
0.001
0
6mer
43001-43017
0.001
Not Conserved
6mer
36187-36201
0.001
0
6mer
43289-43313
0.001
0
8mer+mismatch
44434-44449
0.001
4
6mer
28934-28949
0.001
0
6mer
47379-47405
0.001
2
6mer
23868-23888
0.000
0
XLOC_013685
hsa-miR-150-5p
0.984
mTTBlnEmP

Gene Details
Chromosome: chr20
Transcript: TCONS_00028336
Biotype: transcript isomorph
Gene id: XLOC_013685
Gene Name: XLOC_013685
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
164-187
0.041
0
8mer
1438-1457
0.032
3
6mer
1141-1150
0.002
1
6mer
372-398
0.002
1
LINC01280
hsa-miR-150-5p
0.983
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000449783
Biotype: antisense
Gene id: ENSG00000224391
Gene Name: LINC01280
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
313-329
0.064
2
7mer
703-728
0.009
2
7mer
973-998
0.004
1
RP11-337C18.9
hsa-miR-150-5p
0.983
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000606152
Biotype: antisense
Gene id: ENSG00000271721
Gene Name: RP11-337C18.9
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1771-1794
0.077
1
SNHG14
hsa-miR-150-5p
0.983
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000549804
Biotype: antisense
Gene id: ENSG00000224078
Gene Name: SNHG14
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1010-1035
0.028
1
8mer
1793-1818
0.012
1
8mer
2157-2183
0.010
0
8mer
1275-1301
0.009
0
8mer
2287-2311
0.007
0
6mer
6066-6090
0.002
3
6mer
195-212
0.002
Not Conserved
6mer
670-696
0.002
1
6mer
2822-2849
0.001
1
6mer
4329-4346
0.001
0
6mer
6185-6198
0.001
1
RP3-412A9.17
hsa-miR-150-5p
0.980
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000623789
Biotype: sense_overlapping
Gene id: ENSG00000278920
Gene Name: RP3-412A9.17
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
14583-14601
0.012
4
8mer
430-454
0.007
0
7mer
898-908
0.005
0
7mer
413-423
0.005
0
7mer
16413-16438
0.005
1
7mer
64-89
0.004
Not Conserved
7mer
16292-16302
0.004
Not Conserved
7mer
536-558
0.003
0
7mer
10831-10836
0.003
1
7mer
5924-5949
0.003
1
6mer
16589-16604
0.003
0
6mer
95-121
0.002
0
7mer
11852-11874
0.002
1
7mer
9803-9813
0.002
0
7mer
1017-1041
0.002
0
7mer
2554-2564
0.002
1
6mer
1469-1492
0.001
2
6mer
6377-6400
0.001
1
6mer
6724-6738
0.001
1
6mer
1921-1943
0.001
1
6mer
3584-3603
0.001
1
6mer
6061-6084
0.001
1
6mer
4722-4740
0.001
0
7mer
4767-4777
0.001
0
6mer
2705-2731
0.001
1
6mer
2465-2487
0.001
0
XLOC_008843
hsa-miR-150-5p
0.979
mTTBlnEmP

Gene Details
Chromosome: chr10
Transcript: TCONS_00018944
Biotype: transcript isomorph
Gene id: XLOC_008843
Gene Name: XLOC_008843
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary
- Colon Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
37-43
0.074
0
FTX
hsa-miR-150-5p
0.978
mTTBlnEmP

Gene Details
Chromosome: X
Transcript: ENST00000429124
Biotype: lincRNA
Gene id: ENSG00000230590
Gene Name: FTX
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2328-2347
0.031
2
9mer
1689-1709
0.014
1
7mer
2479-2498
0.012
1
7mer
70-95
0.006
0
7mer
370-391
0.004
1
6mer
102-125
0.004
1
6mer
357-380
0.002
1
RP11-607P23.1
hsa-miR-150-5p
0.978
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000604939
Biotype: antisense
Gene id: ENSG00000271065
Gene Name: RP11-607P23.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
270-289
0.037
2
7mer
28-46
0.036
3
RP11-756G20.1
hsa-miR-150-5p
0.978
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000615716
Biotype: lincRNA
Gene id: ENSG00000277851
Gene Name: RP11-756G20.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
756-781
0.062
6
7mer
92-104
0.009
0
6mer
578-600
0.002
0
CTD-2127H9.1
hsa-miR-150-5p
0.978
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: NR_109951.1
Biotype: lincRNA
Gene id: NR_109951.1 (gene)
Gene Name: CTD-2127H9.1
UCSC graphic: -
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
611-635
0.073
4
RP11-73B2.4
hsa-miR-150-5p
0.978
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000450077
Biotype: lincRNA
Gene id: ENSG00000232817
Gene Name: RP11-73B2.4
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
58-68
0.042
0
8mer
27-51
0.031
0
CTA-243E7.1
hsa-miR-150-5p
0.978
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000623980
Biotype: antisense
Gene id: ENSG00000279110
Gene Name: CTA-243E7.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1401-1418
0.036
2
8mer
941-954
0.008
0
8mer
5775-5798
0.005
1
7mer
12195-12205
0.003
1
7mer
8316-8326
0.002
0
7mer
4002-4016
0.002
0
6mer
9760-9785
0.002
1
6mer
12801-12824
0.002
0
6mer
12476-12496
0.002
1
6mer
8619-8639
0.002
1
6mer
2618-2640
0.001
1
6mer
1120-1139
0.001
Not Conserved
6mer
12307-12331
0.001
0
6mer
7654-7668
0.001
1
7mer
5641-5663
0.001
0
6mer
5198-5222
0.001
1
6mer
9642-9656
0.001
1
8mer
10681-10703
0.001
Not Conserved
6mer
9627-9648
0.000
1
RP5-905H7.8
hsa-miR-150-5p
0.978
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000418297
Biotype: lincRNA
Gene id: ENSG00000229301
Gene Name: RP5-905H7.8
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
461-471
0.042
0
8mer
478-502
0.031
0
XLOC_006122
hsa-miR-150-5p
0.977
mTTBlnEmP

Gene Details
Chromosome: chr7
Transcript: TCONS_00013474
Biotype: transcript isomorph
Gene id: XLOC_006122
Gene Name: XLOC_006122
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
761-776
0.038
1
7mer
404-424
0.027
1
6mer
419-437
0.008
1
RP11-48B3.3
hsa-miR-150-5p
0.977
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000523871
Biotype: lincRNA
Gene id: ENSG00000254162
Gene Name: RP11-48B3.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
3310-3334
0.051
1
7mer
3534-3561
0.006
1
7mer
297-307
0.005
0
7mer
1145-1155
0.004
1
7mer
1012-1037
0.003
1
6mer
2025-2035
0.002
1
6mer
1542-1569
0.001
1
6mer
1482-1507
0.001
1
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