LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-150-5p


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Gene
miRNA
Score
DIANA Links
FAM226A
hsa-miR-150-5p
0.940
mTTBlnEmP

Gene Details
Chromosome: X
Transcript: NR_026595.2
Biotype: sense
Gene id: NR_026595.2 (gene)
Gene Name: FAM226A
UCSC graphic: -
Expression:
  Cell Line Tissue Category
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
223-247
0.049
1
6mer
1192-1219
0.005
3
6mer
1706-1732
0.002
0
LINC00303
hsa-miR-150-5p
0.940
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: NR_027902.1
Biotype: lincRNA
Gene id: NR_027902.1 (gene)
Gene Name: LINC00303
UCSC graphic: -
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1360-1382
0.050
5
6mer
671-690
0.003
4
6mer
879-883
0.002
0
RP11-424M21.1
hsa-miR-150-5p
0.939
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000513617
Biotype: lincRNA
Gene id: ENSG00000249184
Gene Name: RP11-424M21.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Heart Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
189-204
0.040
0
8mer
195-222
0.015
0
XLOC_001751
hsa-miR-150-5p
0.939
mTTBlnEmP

Gene Details
Chromosome: chr2
Transcript: TCONS_00003048
Biotype: transcript isomorph
Gene id: XLOC_001751
Gene Name: XLOC_001751
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
- Brain Normal/Primary
- Breast Normal/Primary
HeLa Cervix Cancer/Malignant
- Colon Normal/Primary
- Heart Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
- Kidney Normal/Primary
- Liver Normal/Primary
Fibroblasts Lung Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1581-1606
0.025
1
7mer
1474-1495
0.013
0
7mer
1897-1907
0.011
0
6mer
104-119
0.007
0
XLOC_012077
hsa-miR-150-5p
0.939
mTTBlnEmP

Gene Details
Chromosome: chr17
Transcript: TCONS_00025270
Biotype: transcript isomorph
Gene id: XLOC_012077
Gene Name: XLOC_012077
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
- Ovary Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
159-182
0.031
1
8mer
297-307
0.024
0
RP11-791G15.2
hsa-miR-150-5p
0.938
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000606907
Biotype: lincRNA
Gene id: ENSG00000272275
Gene Name: RP11-791G15.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
24-43
0.053
0
6mer
154-171
0.003
0
ZNF561-AS1
hsa-miR-150-5p
0.938
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000586943
Biotype: retained_intron
Gene id: ENSG00000267106
Gene Name: ZNF561-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1564-1584
0.029
0
7mer
908-918
0.020
0
6mer
1379-1397
0.007
0
LINC00303
hsa-miR-150-5p
0.938
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000367207
Biotype: lincRNA
Gene id: ENSG00000176754
Gene Name: LINC00303
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1736-1758
0.050
5
6mer
671-690
0.003
4
6mer
879-883
0.002
0
RP11-81H3.2
hsa-miR-150-5p
0.938
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000548427
Biotype: lincRNA
Gene id: ENSG00000251138
Gene Name: RP11-81H3.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
286-307
0.043
1
7mer
336-362
0.007
0
6mer
670-691
0.005
0
AC004951.6
hsa-miR-150-5p
0.936
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000447643
Biotype: lincRNA
Gene id: ENSG00000228434
Gene Name: AC004951.6
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
245-255
0.025
0
6mer
293-317
0.012
0
6mer
648-664
0.010
0
6mer
1066-1092
0.007
0
XLOC_011038
hsa-miR-150-5p
0.936
mTTBlnEmP

Gene Details
Chromosome: chr14
Transcript: TCONS_00022755
Biotype: transcript isomorph
Gene id: XLOC_011038
Gene Name: XLOC_011038
UCSC graphic: -
Expression:
  Cell Line Tissue Category
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
17-35
0.052
9
6mer
974-995
0.002
1
LINC01440
hsa-miR-150-5p
0.936
mTTBlnEmP

Gene Details
Chromosome: 20
Transcript: ENST00000596828
Biotype: lincRNA
Gene id: ENSG00000235166
Gene Name: LINC01440
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
336-358
0.023
1
7mer
407-429
0.021
3
7mer
681-695
0.011
1
LINC01097
hsa-miR-150-5p
0.936
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: NR_034054.1
Biotype: lincRNA
Gene id: NR_034054.1 (gene)
Gene Name: LINC01097
UCSC graphic: -
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
689-708
0.054
2
FAM27L
hsa-miR-150-5p
0.935
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000613377
Biotype: lincRNA
Gene id: ENSG00000178130
Gene Name: FAM27L
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
165-182
0.054
1
CTC-260E6.6
hsa-miR-150-5p
0.935
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000586657
Biotype: antisense
Gene id: ENSG00000267383
Gene Name: CTC-260E6.6
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
- Brain Normal/Primary
- Breast Normal/Primary
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
- Kidney Normal/Primary
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
Fibroblasts Lung Normal/Primary
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
- Lymph Node Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
- Ovary Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
410-432
0.054
1
RP11-219B17.1
hsa-miR-150-5p
0.935
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000559203
Biotype: antisense
Gene id: ENSG00000245534
Gene Name: RP11-219B17.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HeLa Cervix Cancer/Malignant
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
665-682
0.045
0
6mer
79-95
0.006
4
6mer
201-228
0.003
1
LINC01197
hsa-miR-150-5p
0.934
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000555332
Biotype: lincRNA
Gene id: ENSG00000248441
Gene Name: LINC01197
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
HUVEC Blood Vessel Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
795-811
0.019
2
9mer
2061-2086
0.018
0
7mer
3338-3355
0.009
4
6mer
3421-3436
0.007
2
6mer
2312-2334
0.002
0
RP11-340A13.1
hsa-miR-150-5p
0.933
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000507912
Biotype: retained_intron
Gene id: ENSG00000249382
Gene Name: RP11-340A13.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
225-245
0.054
1
RP11-1217F2.15
hsa-miR-150-5p
0.933
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000415836
Biotype: lincRNA
Gene id: ENSG00000234089
Gene Name: RP11-1217F2.15
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
518-541
0.041
1
7mer
232-248
0.012
0
RP11-84C10.3
hsa-miR-150-5p
0.933
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000555642
Biotype: lincRNA
Gene id: ENSG00000258772
Gene Name: RP11-84C10.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
62-88
0.054
1
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