LncBase Predicted v.2
Help
Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
Bulk download:
We have updated the bulk download module, which simplifies the download process! Please find the new online form by following this link
Deprecated!
This version is deprecated. Users are strongly advised to only use the latest, up-to-date versions of DIANA-Tools and Databases.
Please follow this link to navigate to the latest database version.

hsa-miR-149-3p


or   Search by location
Loading... Please wait, this might take a few seconds...



Go to Experimental module
Filters

Gene
miRNA
Score
DIANA Links
RP11-1038A11.3
hsa-miR-149-3p
0.999
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000537192
Biotype: lincRNA
Gene id: ENSG00000256417
Gene Name: RP11-1038A11.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-149-3p
Sequence: agggagggacgggggcugugc
MirBase ID: MIMAT0004609
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
934-958
0.064
1
8mer
963-977
0.056
5
7mer
957-974
0.003
1
6mer
963-985
0.003
0
7mer
30-56
0.002
0
RP11-728E14.3
hsa-miR-149-3p
0.999
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000577309
Biotype: lincRNA
Gene id: ENSG00000265043
Gene Name: RP11-728E14.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-149-3p
Sequence: agggagggacgggggcugugc
MirBase ID: MIMAT0004609
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
329-353
0.036
0
8mer
747-772
0.032
1
8mer
1881-1906
0.009
0
6mer
2598-2623
0.008
1
6mer
312-326
0.007
1
7mer
1933-1958
0.006
0
6mer
2182-2204
0.005
1
7mer
1414-1430
0.004
1
8mer
1743-1769
0.004
0
7mer
2094-2117
0.003
0
6mer
1517-1536
0.002
1
8mer
1561-1579
0.002
0
7mer
2120-2137
0.002
0
7mer
1913-1935
0.002
0
6mer
1254-1271
0.001
0
6mer
1632-1653
0.001
0
6mer
2144-2170
0.001
0
7mer
1818-1842
0.001
Not Conserved
7mer
1884-1906
0.001
0
8mer
1724-1744
0.001
Not Conserved
7mer
1781-1807
0.001
Not Conserved
CTB-187M2.3
hsa-miR-149-3p
0.999
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000582654
Biotype: lincRNA
Gene id: ENSG00000263726
Gene Name: CTB-187M2.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-149-3p
Sequence: agggagggacgggggcugugc
MirBase ID: MIMAT0004609
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
68-91
0.105
1
7mer
330-352
0.014
1
6mer
71-91
0.007
1
MIR4534
hsa-miR-149-3p
0.999
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000623111
Biotype: sense_overlapping
Gene id: ENSG00000279010
Gene Name: MIR4534
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-149-3p
Sequence: agggagggacgggggcugugc
MirBase ID: MIMAT0004609
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
49116-49135
0.004
1
7mer
32666-32685
0.003
1
9mer
37066-37086
0.003
1
6mer
54473-54498
0.003
0
7mer
19893-19910
0.003
3
7mer
25731-25753
0.003
8
8mer
41890-41907
0.003
2
7mer
47973-47996
0.003
6
9mer
34701-34716
0.002
0
6mer
34535-34560
0.002
3
8mer
39163-39187
0.002
1
7mer
49721-49737
0.002
2
7mer
24792-24815
0.002
1
8mer
50240-50264
0.002
0
6mer
1685-1707
0.002
1
7mer
49501-49523
0.002
0
6mer
51757-51781
0.002
1
6mer
30160-30184
0.002
5
6mer
19740-19763
0.002
7
6mer
18503-18521
0.002
0
6mer
949-965
0.002
1
6mer
3572-3588
0.001
0
6mer
7846-7862
0.001
1
6mer
48862-48886
0.001
1
6mer
4936-4955
0.001
2
7mer
42856-42879
0.001
1
6mer
2002-2019
0.001
1
6mer
10999-11022
0.001
2
8mer+wobble
51816-51834
0.001
1
6mer
43011-43026
0.001
1
6mer
16464-16480
0.001
1
7mer
29836-29859
0.001
1
6mer
15043-15062
0.001
1
8mer
31590-31611
0.001
2
6mer
16889-16914
0.001
Not Conserved
8mer
31592-31614
0.001
1
6mer
5281-5307
0.001
3
7mer
31663-31687
0.001
1
6mer
34104-34131
0.001
1
6mer
6059-6075
0.001
1
6mer
54094-54113
0.001
1
6mer
29212-29227
0.001
2
6mer
13488-13509
0.001
0
6mer
33021-33033
0.001
1
6mer
27935-27955
0.001
1
6mer
11519-11544
0.001
1
6mer
12596-12621
0.001
0
6mer
29608-29634
0.001
6
7mer
4157-4182
0.001
0
6mer
53255-53273
0.001
1
6mer
12292-12308
0.001
0
7mer
41506-41532
0.001
0
6mer
44145-44167
0.001
0
8mer
49335-49355
0.001
1
6mer
20333-20355
0.001
2
6mer
30492-30517
0.001
1
6mer
12740-12756
0.001
0
6mer
2931-2950
0.001
0
7mer
37665-37680
0.001
7
6mer
35455-35473
0.001
8
6mer
11695-11711
0.001
1
7mer
51229-51244
0.001
1
6mer
51185-51202
0.001
1
6mer
37995-38019
0.001
3
6mer
26244-26260
0.001
2
6mer
14587-14597
0.001
1
6mer
49942-49967
0.001
0
6mer
37651-37669
0.001
7
7mer
20269-20289
0.001
2
6mer
30980-31005
0.001
1
6mer
10085-10101
0.001
0
6mer
46388-46413
0.001
1
6mer
41200-41218
0.001
1
6mer
12423-12440
0.001
0
6mer
12805-12827
0.001
0
6mer
32750-32773
0.001
1
6mer
50674-50695
0.001
1
6mer
7963-7983
0.001
0
6mer
41242-41268
0.001
1
6mer
26564-26586
0.001
2
6mer
38122-38146
0.001
2
6mer
30848-30870
0.001
0
6mer
18691-18706
0.001
2
6mer
19598-19619
0.001
2
6mer
44290-44306
0.001
1
6mer
30538-30549
0.001
1
6mer
3705-3722
0.001
0
6mer
6192-6208
0.001
0
6mer
50138-50157
0.001
1
6mer
18703-18723
0.001
Not Conserved
6mer
2156-2181
0.001
0
6mer
32361-32376
0.001
1
9mer
39171-39191
0.001
0
6mer
11948-11964
0.001
Not Conserved
6mer
52324-52341
0.001
1
6mer
46520-46539
0.001
1
6mer
49043-49065
0.000
0
7mer
50003-50027
0.000
3
6mer
36339-36363
0.000
2
6mer
50224-50249
0.000
2
6mer
46530-46552
0.000
1
6mer
11560-11576
0.000
1
6mer
32158-32183
0.000
0
6mer
29350-29374
0.000
2
6mer
48920-48937
0.000
0
6mer
14709-14727
0.000
1
6mer
2182-2200
0.000
0
6mer
32433-32457
0.000
0
6mer
11974-11996
0.000
1
6mer
2941-2963
0.000
0
6mer
49366-49384
0.000
2
KCNQ1OT1
hsa-miR-149-3p
0.999
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000597346
Biotype: antisense
Gene id: ENSG00000269821
Gene Name: KCNQ1OT1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
HepG2 Liver Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-149-3p
Sequence: agggagggacgggggcugugc
MirBase ID: MIMAT0004609
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
82843-82868
0.006
4
7mer
2518-2538
0.006
Not Conserved
7mer
28384-28406
0.006
0
7mer
91083-91098
0.004
1
8mer
49747-49765
0.003
Not Conserved
8mer
65772-65797
0.003
3
7mer
61737-61762
0.003
1
7mer
45912-45934
0.003
4
7mer
87403-87420
0.003
2
7mer
85211-85235
0.003
2
7mer
41179-41194
0.003
Not Conserved
7mer
46161-46185
0.003
1
8mer
79672-79697
0.003
3
7mer
81458-81474
0.003
1
8mer
77384-77408
0.003
1
7mer
84382-84402
0.003
0
6mer
39394-39415
0.002
0
6mer
56452-56464
0.002
3
6mer
42519-42535
0.002
2
7mer
86679-86695
0.002
1
6mer
42809-42833
0.002
3
8mer
46408-46429
0.002
1
6mer
39199-39220
0.002
0
6mer
56727-56751
0.002
3
6mer
70466-70483
0.002
1
8mer+wobble
77737-77753
0.002
0
6mer
62812-62827
0.002
2
7mer
76431-76449
0.002
1
7mer
58653-58672
0.002
4
6mer
54895-54919
0.002
0
6mer
57595-57616
0.001
1
6mer
71270-71286
0.001
1
6mer
68348-68370
0.001
2
7mer
79929-79948
0.001
0
8mer
78799-78818
0.001
0
7mer
65775-65797
0.001
4
7mer
14701-14724
0.001
Not Conserved
6mer
78868-78895
0.001
1
8mer
45992-46011
0.001
1
6mer
43784-43809
0.001
5
6mer
73774-73801
0.001
1
6mer
77210-77233
0.001
1
6mer
23782-23807
0.001
0
6mer
23615-23632
0.001
0
6mer
78018-78040
0.001
3
6mer
65596-65604
0.001
1
6mer
76528-76548
0.001
1
6mer
55320-55332
0.001
1
6mer
38202-38217
0.001
0
6mer
61225-61245
0.001
1
6mer
63528-63553
0.001
1
6mer
81094-81111
0.001
1
6mer
91556-91580
0.001
Not Conserved
6mer
39890-39915
0.001
0
6mer
83397-83416
0.001
1
6mer
79073-79093
0.001
1
6mer
77957-77975
0.001
2
7mer
91214-91241
0.001
Not Conserved
6mer
73448-73466
0.001
1
6mer
66127-66139
0.001
1
6mer
84242-84265
0.001
Not Conserved
7mer
82462-82484
0.001
Not Conserved
6mer
23750-23775
0.001
0
6mer
53597-53616
0.001
0
6mer
83301-83318
0.001
1
6mer
79347-79365
0.001
0
6mer
57921-57938
0.001
1
6mer
37366-37391
0.001
0
6mer
39108-39123
0.000
0
6mer
83264-83282
0.000
1
6mer
76345-76366
0.000
0
6mer
57362-57377
0.000
0
7mer
65667-65682
0.000
0
6mer
57889-57915
0.000
1
6mer
66115-66139
0.000
1
XLOC_012416
hsa-miR-149-3p
0.999
mTTBlnEmP

Gene Details
Chromosome: chr17
Transcript: TCONS_00025586
Biotype: transcript isomorph
Gene id: XLOC_012416
Gene Name: XLOC_012416
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-149-3p
Sequence: agggagggacgggggcugugc
MirBase ID: MIMAT0004609
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
68-91
0.102
1
7mer
636-658
0.011
1
6mer
71-91
0.007
1
LINC00638
hsa-miR-149-3p
0.999
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000555578
Biotype: lincRNA
Gene id: ENSG00000258701
Gene Name: LINC00638
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant


miRNA Details
Name: hsa-miR-149-3p
Sequence: agggagggacgggggcugugc
MirBase ID: MIMAT0004609
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2166-2180
0.041
1
7mer
2089-2109
0.029
1
7mer
1774-1798
0.018
1
7mer
1990-2009
0.015
1
6mer
597-622
0.009
1
6mer
1105-1124
0.005
1
6mer
837-857
0.002
0
RP11-7K24.3
hsa-miR-149-3p
0.999
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000562471
Biotype: lincRNA
Gene id: ENSG00000261068
Gene Name: RP11-7K24.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-149-3p
Sequence: agggagggacgggggcugugc
MirBase ID: MIMAT0004609
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1878-1903
0.049
1
8mer
1963-1980
0.045
3
6mer
1633-1656
0.012
5
7mer
139-156
0.005
Not Conserved
6mer
889-904
0.003
1
6mer
528-546
0.002
0
6mer
1782-1808
0.002
1
RP13-580B18.4
hsa-miR-149-3p
0.998
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000624628
Biotype: lincRNA
Gene id: ENSG00000279072
Gene Name: RP13-580B18.4
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-149-3p
Sequence: agggagggacgggggcugugc
MirBase ID: MIMAT0004609
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer+wobble
12-32
0.008
0
6mer
209-226
0.003
0
6mer
23932-23954
0.003
Not Conserved
6mer
130-154
0.003
0
6mer
23945-23965
0.003
Not Conserved
6mer
23066-23091
0.003
0
6mer
431-450
0.002
0
6mer
344-363
0.002
0
7mer
19222-19249
0.002
0
7mer
2665-2682
0.002
Not Conserved
7mer
4356-4373
0.002
0
6mer
23964-23989
0.002
Not Conserved
6mer
23502-23526
0.002
0
6mer
23576-23591
0.002
0
6mer
23767-23784
0.002
Not Conserved
7mer
13594-13611
0.001
Not Conserved
7mer
6098-6115
0.001
Not Conserved
7mer
9774-9791
0.001
Not Conserved
6mer
718-734
0.001
0
7mer
21254-21280
0.001
0
6mer
916-932
0.001
Not Conserved
7mer
11612-11629
0.001
Not Conserved
7mer
17183-17200
0.001
Not Conserved
7mer
7888-7915
0.001
Not Conserved
6mer
7464-7490
0.001
Not Conserved
6mer
1245-1269
0.001
Not Conserved
6mer
20876-20892
0.001
0
6mer
1543-1562
0.001
Not Conserved
7mer
19708-19727
0.001
0
6mer
3450-3470
0.001
0
7mer
15441-15458
0.001
Not Conserved
8mer+wobble
2283-2299
0.001
Not Conserved
6mer
19001-19018
0.001
0
6mer
18737-18752
0.001
0
6mer
12688-12708
0.001
0
6mer
10706-10726
0.001
0
7mer
10890-10910
0.001
Not Conserved
6mer
9392-9408
0.001
Not Conserved
6mer
22074-22090
0.001
Not Conserved
7mer
19486-19504
0.001
Not Conserved
7mer
12872-12892
0.001
Not Conserved
6mer
22363-22380
0.001
Not Conserved
6mer
10643-10664
0.001
0
6mer
3974-3990
0.001
0
6mer
14795-14816
0.001
Not Conserved
6mer
5452-5469
0.001
Not Conserved
6mer
16537-16554
0.001
Not Conserved
7mer
5376-5396
0.001
Not Conserved
6mer
6919-6935
0.001
Not Conserved
6mer
9128-9145
0.001
Not Conserved
6mer
18115-18135
0.001
Not Conserved
6mer
10966-10983
0.001
Not Conserved
6mer
7242-7259
0.001
Not Conserved
6mer
22966-22985
0.001
Not Conserved
6mer
6982-7002
0.001
Not Conserved
6mer
16214-16230
0.001
Not Conserved
6mer
10445-10465
0.001
0
6mer
18477-18492
0.001
0
6mer
22263-22283
0.001
0
6mer
5192-5212
0.001
Not Conserved
6mer
16277-16297
0.001
Not Conserved
6mer
3932-3958
0.001
0
6mer
5129-5150
0.001
Not Conserved
6mer
12625-12646
0.001
Not Conserved
6mer
655-671
0.001
0
6mer
14535-14555
0.001
Not Conserved
6mer
8868-8888
0.001
Not Conserved
6mer
17854-17874
0.000
0
6mer
3710-3727
0.000
Not Conserved
6mer
18379-18396
0.000
Not Conserved
6mer
12948-12965
0.000
Not Conserved
6mer
3387-3403
0.000
Not Conserved
6mer
18052-18073
0.000
Not Conserved
6mer
14472-14488
0.000
Not Conserved
6mer
8805-8826
0.000
Not Conserved
6mer
8441-8466
0.000
Not Conserved
6mer
18922-18944
0.000
0
6mer
19099-19120
0.000
0
6mer
10279-10304
0.000
0
6mer
16801-16817
0.000
Not Conserved
6mer
11230-11246
0.000
Not Conserved
6mer
16759-16785
0.000
Not Conserved
6mer
15059-15075
0.000
Not Conserved
6mer
5716-5732
0.000
Not Conserved
6mer
13212-13228
0.000
Not Conserved
6mer
3808-3829
0.000
0
6mer
2178-2204
0.000
Not Conserved
6mer
11188-11214
0.000
Not Conserved
6mer
8607-8627
0.000
Not Conserved
6mer
5550-5571
0.000
Not Conserved
6mer
5674-5700
0.000
Not Conserved
6mer
15017-15043
0.000
Not Conserved
6mer
9350-9376
0.000
Not Conserved
6mer
18643-18659
0.000
0
6mer
14893-14914
0.000
Not Conserved
6mer
2054-2075
0.000
Not Conserved
6mer
12427-12447
0.000
Not Conserved
6mer
20746-20762
0.000
0
6mer
3635-3654
0.000
0
6mer
18601-18619
0.000
Not Conserved
6mer
20636-20658
0.000
0
6mer
3189-3209
0.000
Not Conserved
6mer
13170-13196
0.000
Not Conserved
6mer
6721-6741
0.000
Not Conserved
6mer
20611-20629
0.000
0
6mer
18300-18323
0.000
Not Conserved
6mer
6555-6580
0.000
Not Conserved
6mer
15850-15875
0.000
Not Conserved
6mer
14099-14124
0.000
Not Conserved
8mer+mismatch
6430-6456
0.000
0
6mer
4765-4790
0.000
Not Conserved
6mer
14276-14296
0.000
Not Conserved
6mer
4931-4951
0.000
Not Conserved
6mer
16016-16036
0.000
Not Conserved
6mer
9053-9072
0.000
Not Conserved
6mer
11064-11085
0.000
Not Conserved
6mer
7340-7361
0.000
Not Conserved
6mer
13046-13067
0.000
Not Conserved
6mer
16635-16656
0.000
Not Conserved
6mer
9226-9247
0.000
Not Conserved
6mer
12261-12286
0.000
Not Conserved
6mer
12364-12384
0.000
Not Conserved
6mer
17688-17713
0.000
Not Conserved
6mer
3026-3044
0.000
Not Conserved
6mer
20686-20712
0.000
Not Conserved
6mer
10382-10398
0.000
0
6mer
7167-7186
0.000
Not Conserved
6mer
16462-16481
0.000
Not Conserved
6mer
14720-14739
0.000
Not Conserved
6mer
19451-19467
0.000
0
6mer
6423-6445
0.000
0
8mer+mismatch
17563-17589
0.000
Not Conserved
6mer
4868-4884
0.000
Not Conserved
6mer
6491-6507
0.000
Not Conserved
6mer
14213-14229
0.000
Not Conserved
6mer
2220-2236
0.000
Not Conserved
6mer
15786-15806
0.000
Not Conserved
8mer+mismatch
2901-2927
0.000
Not Conserved
8mer+mismatch
8316-8342
0.000
Not Conserved
6mer
10215-10235
0.000
Not Conserved
6mer
4701-4721
0.000
Not Conserved
8mer+mismatch
12136-12162
0.000
Not Conserved
6mer
8377-8397
0.000
Not Conserved
8mer+mismatch
15725-15751
0.000
Not Conserved
8mer+mismatch
10154-10180
0.000
Not Conserved
8mer+mismatch
4640-4666
0.000
Not Conserved
6mer
14035-14055
0.000
Not Conserved
6mer
15953-15969
0.000
Not Conserved
6mer
2919-2941
0.000
Not Conserved
6mer
12197-12217
0.000
Not Conserved
6mer
6658-6674
0.000
Not Conserved
6mer
3126-3142
0.000
Not Conserved
8mer+mismatch
13974-14000
0.000
Not Conserved
6mer
8309-8331
0.000
Not Conserved
6mer
17791-17807
0.000
Not Conserved
6mer
12129-12151
0.000
Not Conserved
6mer
6448-6470
0.000
0
6mer
13967-13989
0.000
Not Conserved
6mer
15718-15740
0.000
Not Conserved
6mer
10147-10169
0.000
Not Conserved
6mer
17581-17603
0.000
Not Conserved
6mer
2894-2916
0.000
Not Conserved
6mer
4633-4655
0.000
Not Conserved
6mer
17556-17575
0.000
Not Conserved
6mer
10172-10194
0.000
Not Conserved
6mer
8334-8356
0.000
Not Conserved
6mer
4658-4680
0.000
Not Conserved
6mer
13992-14014
0.000
Not Conserved
6mer
12154-12176
0.000
Not Conserved
6mer
15743-15765
0.000
Not Conserved
CYP4F26P
hsa-miR-149-3p
0.998
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000432139
Biotype: lincRNA
Gene id: ENSG00000226562
Gene Name: CYP4F26P
UCSC graphic:
Expression:
  Cell Line Tissue Category
HeLa Cervix Cancer/Malignant
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-149-3p
Sequence: agggagggacgggggcugugc
MirBase ID: MIMAT0004609
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
438-452
0.054
0
8mer
431-449
0.048
0
6mer
180-198
0.010
0
AC022007.5
hsa-miR-149-3p
0.998
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000420091
Biotype: lincRNA
Gene id: ENSG00000206567
Gene Name: AC022007.5
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-149-3p
Sequence: agggagggacgggggcugugc
MirBase ID: MIMAT0004609
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
199-222
0.052
0
7mer
1149-1165
0.030
0
7mer
245-260
0.016
0
6mer
431-450
0.008
0
7mer
210-225
0.006
Not Conserved
RP11-57A19.5
hsa-miR-149-3p
0.998
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000602838
Biotype: lincRNA
Gene id: ENSG00000270118
Gene Name: RP11-57A19.5
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
HepG2 Liver Cancer/Malignant


miRNA Details
Name: hsa-miR-149-3p
Sequence: agggagggacgggggcugugc
MirBase ID: MIMAT0004609
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
170-194
0.110
0
XLOC_013553
hsa-miR-149-3p
0.998
mTTBlnEmP

Gene Details
Chromosome: chr20
Transcript: TCONS_00028205
Biotype: transcript isomorph
Gene id: XLOC_013553
Gene Name: XLOC_013553
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-149-3p
Sequence: agggagggacgggggcugugc
MirBase ID: MIMAT0004609
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
384-406
0.016
1
8mer
761-785
0.015
1
6mer
6310-6330
0.004
1
7mer
1179-1198
0.004
0
6mer
6468-6487
0.004
1
6mer
6418-6434
0.004
1
7mer
5702-5722
0.003
1
7mer
5900-5920
0.003
1
6mer
1403-1427
0.003
1
7mer
2693-2713
0.003
1
7mer
5212-5232
0.002
1
7mer
1489-1513
0.002
1
6mer
5950-5968
0.002
1
7mer
6051-6067
0.002
0
7mer
5461-5477
0.002
1
7mer
4378-4400
0.002
0
6mer
2245-2259
0.002
0
7mer
3957-3977
0.002
Not Conserved
7mer
5800-5820
0.002
0
7mer
5848-5871
0.002
0
6mer
5555-5573
0.002
1
7mer
5258-5281
0.001
1
7mer
1922-1939
0.001
1
7mer
4918-4938
0.001
0
7mer
4775-4791
0.001
0
7mer
5755-5771
0.001
0
7mer
3096-3115
0.001
Not Conserved
7mer
5310-5330
0.001
0
6mer
1191-1215
0.001
1
7mer
4624-4644
0.001
0
6mer
3369-3383
0.001
0
7mer
2025-2045
0.001
0
7mer
1761-1781
0.001
0
7mer
1598-1618
0.001
0
7mer
5363-5379
0.001
0
7mer
4485-4497
0.001
0
7mer
3659-3679
0.001
Not Conserved
6mer
4579-4594
0.001
0
6mer
5063-5083
0.001
0
7mer
5114-5134
0.001
0
6mer
3878-3890
0.001
Not Conserved
7mer
5603-5623
0.001
Not Conserved
7mer
4526-4546
0.001
0
7mer
5504-5526
0.001
Not Conserved
6mer
3444-3463
0.001
0
7mer
4873-4889
0.001
Not Conserved
7mer
3818-3838
0.001
Not Conserved
7mer
4672-4693
0.001
Not Conserved
6mer
2326-2345
0.001
0
7mer
5015-5035
0.001
Not Conserved
7mer
3314-3331
0.001
Not Conserved
7mer
2431-2450
0.000
Not Conserved
7mer
3497-3517
0.000
Not Conserved
6mer
4967-4985
0.000
Not Conserved
6mer
2377-2397
0.000
0
6mer
3205-3224
0.000
0
7mer
2855-2872
0.000
Not Conserved
7mer
1975-1992
0.000
Not Conserved
8mer+mismatch
2855-2872
0.000
Not Conserved
6mer
3154-3172
0.000
Not Conserved
RP5-1198O20.4
hsa-miR-149-3p
0.998
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000447959
Biotype: lincRNA
Gene id: ENSG00000230615
Gene Name: RP5-1198O20.4
UCSC graphic:
Expression:
  Cell Line Tissue Category
HeLa Cervix Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-149-3p
Sequence: agggagggacgggggcugugc
MirBase ID: MIMAT0004609
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
537-559
0.064
1
7mer
692-707
0.029
1
7mer
256-277
0.011
0
6mer
537-555
0.006
0
AC093627.7
hsa-miR-149-3p
0.997
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000465755
Biotype: lincRNA
Gene id: ENSG00000232325
Gene Name: AC093627.7
UCSC graphic:
Expression:
  Cell Line Tissue Category
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
- Lymph Node Normal/Primary


miRNA Details
Name: hsa-miR-149-3p
Sequence: agggagggacgggggcugugc
MirBase ID: MIMAT0004609
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
187-211
0.059
1
7mer
690-706
0.021
1
7mer
454-478
0.015
0
6mer
90-114
0.013
1
XLOC_014129
hsa-miR-149-3p
0.997
mTTBlnEmP

Gene Details
Chromosome: chr21
Transcript: TCONS_00029187
Biotype: transcript isomorph
Gene id: XLOC_014129
Gene Name: XLOC_014129
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
- Brain Normal/Primary
SK-N-SH Brain Cancer/Malignant
- Breast Normal/Primary
HeLa Cervix Cancer/Malignant
- Colon Normal/Primary
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
- Heart Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
- Liver Normal/Primary
A549 Lung Cancer/Malignant
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-149-3p
Sequence: agggagggacgggggcugugc
MirBase ID: MIMAT0004609
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
95-118
0.067
0
8mer+wobble
991-1015
0.016
Not Conserved
6mer
80-106
0.009
0
7mer
965-981
0.007
0
6mer
98-118
0.006
0
6mer
1140-1159
0.002
0
XLOC_009788
hsa-miR-149-3p
0.997
mTTBlnEmP

Gene Details
Chromosome: chr12
Transcript: TCONS_00020456
Biotype: transcript isomorph
Gene id: XLOC_009788
Gene Name: XLOC_009788
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
K562 Blood Cancer/Malignant
hMSC-BM Bone Marrow Stem/Progenitor
- Brain Normal/Primary
- Breast Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
Fibroblasts Lung Normal/Primary
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-149-3p
Sequence: agggagggacgggggcugugc
MirBase ID: MIMAT0004609
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
4610-4636
0.051
1
7mer
4711-4738
0.015
1
9mer
4090-4103
0.011
1
7mer
3915-3933
0.011
0
9mer
3992-4010
0.005
0
6mer
316-336
0.004
1
6mer
4591-4616
0.004
0
7mer
2324-2337
0.004
2
7mer
3994-4006
0.002
0
RP11-15H20.6
hsa-miR-149-3p
0.997
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000598323
Biotype: lincRNA
Gene id: ENSG00000213971
Gene Name: RP11-15H20.6
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD3 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-149-3p
Sequence: agggagggacgggggcugugc
MirBase ID: MIMAT0004609
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
28-47
0.100
1
6mer
333-348
0.003
0
XLOC_013592
hsa-miR-149-3p
0.996
mTTBlnEmP

Gene Details
Chromosome: chr20
Transcript: TCONS_00028250
Biotype: transcript isomorph
Gene id: XLOC_013592
Gene Name: XLOC_013592
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-149-3p
Sequence: agggagggacgggggcugugc
MirBase ID: MIMAT0004609
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
457-478
0.063
2
8mer
241-263
0.039
0
FAM66C
hsa-miR-149-3p
0.996
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000438689
Biotype: antisense
Gene id: ENSG00000226711
Gene Name: FAM66C
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor


miRNA Details
Name: hsa-miR-149-3p
Sequence: agggagggacgggggcugugc
MirBase ID: MIMAT0004609
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
174-192
0.088
0
6mer
174-189
0.013
0
Funded by:
We have placed cookies on your device to help make this website and the services we offer better. By using this site, you agree to the use of cookies. Learn more
I accept