LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-148b-5p

ENST00000597346

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Gene
miRNA
Score
DIANA Links
KCNQ1OT1
hsa-miR-148b-5p
1.000
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000597346
Biotype: antisense
Gene id: ENSG00000269821
Gene Name: KCNQ1OT1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
HepG2 Liver Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-148b-5p
Sequence: aaguucuguuauacacucaggc
MirBase ID: MIMAT0004699
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
878-888
0.014
1
8mer
12407-12419
0.008
0
7mer
88842-88864
0.007
1
8mer
50827-50846
0.006
3
7mer
34334-34348
0.005
0
8mer
14238-14248
0.005
Not Conserved
8mer
1339-1347
0.005
1
8mer
53133-53159
0.005
1
7mer
74683-74702
0.005
2
7mer
17590-17608
0.004
1
7mer
25867-25889
0.003
0
6mer
1369-1384
0.003
0
6mer
87800-87823
0.003
2
6mer
13093-13118
0.003
1
7mer
48916-48932
0.003
1
6mer
10729-10739
0.003
1
6mer
1023-1049
0.002
0
6mer
14753-14769
0.002
1
6mer
11861-11871
0.002
1
6mer
20319-20330
0.002
1
7mer
64404-64429
0.002
0
6mer
39254-39265
0.002
Not Conserved
6mer
88633-88638
0.002
1
6mer
26730-26747
0.002
0
6mer
34937-34946
0.002
0
6mer
28927-28949
0.002
0
6mer
7241-7265
0.002
1
8mer
77592-77607
0.002
1
6mer
24394-24404
0.002
1
6mer
2276-2291
0.002
1
6mer
49084-49101
0.002
2
6mer
89195-89214
0.002
2
6mer
42813-42829
0.002
3
6mer
4160-4186
0.002
1
7mer
30452-30476
0.002
0
6mer
38738-38753
0.002
0
6mer
83951-83965
0.002
1
6mer
50888-50914
0.002
2
6mer
4844-4864
0.002
2
6mer
76160-76177
0.002
0
6mer
62468-62489
0.002
1
8mer+wobble
64175-64191
0.002
0
6mer
51400-51424
0.002
1
6mer
14968-14988
0.002
1
6mer
30710-30724
0.001
0
6mer
40258-40282
0.001
1
6mer
72213-72232
0.001
0
6mer
42999-43012
0.001
1
6mer
38547-38563
0.001
0
6mer
77337-77364
0.001
1
6mer
26402-26418
0.001
0
6mer
42212-42231
0.001
1
8mer
83858-83884
0.001
0
6mer
29190-29212
0.001
0
6mer
83544-83554
0.001
1
6mer
4535-4553
0.001
Not Conserved
7mer
48830-48856
0.001
1
7mer
43769-43781
0.001
0
7mer
43702-43720
0.001
1
7mer
30413-30435
0.001
Not Conserved
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