LncBase Predicted v.2
Help
Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
Bulk download:
We have updated the bulk download module, which simplifies the download process! Please find the new online form by following this link
Deprecated!
This version is deprecated. Users are strongly advised to only use the latest, up-to-date versions of DIANA-Tools and Databases.
Please follow this link to navigate to the latest database version.

hsa-miR-148b-5p


or   Search by location
Loading... Please wait, this might take a few seconds...



Go to Experimental module
Filters

Gene
miRNA
Score
DIANA Links
XLOC_012981
hsa-miR-148b-5p
0.981
mTTBlnEmP

Gene Details
Chromosome: chr19
Transcript: TCONS_00027489
Biotype: transcript isomorph
Gene id: XLOC_012981
Gene Name: XLOC_012981
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
K562 Blood Cancer/Malignant
- Brain Normal/Primary
HeLa Cervix Cancer/Malignant
- Kidney Normal/Primary
- Liver Normal/Primary
- Lung Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-148b-5p
Sequence: aaguucuguuauacacucaggc
MirBase ID: MIMAT0004699
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1872-1896
0.039
1
7mer
2077-2101
0.024
1
6mer
2272-2295
0.007
0
6mer
1883-1905
0.006
1
RP11-347J14.7
hsa-miR-148b-5p
0.980
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000423499
Biotype: lincRNA
Gene id: ENSG00000231140
Gene Name: RP11-347J14.7
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Lung Normal/Primary
- Ovary Normal/Primary


miRNA Details
Name: hsa-miR-148b-5p
Sequence: aaguucuguuauacacucaggc
MirBase ID: MIMAT0004699
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
586-606
0.063
1
6mer
27-37
0.012
0
LINC01484
hsa-miR-148b-5p
0.980
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000518902
Biotype: lincRNA
Gene id: ENSG00000253686
Gene Name: LINC01484
UCSC graphic:
Expression:
  Cell Line Tissue Category
HeLa Cervix Cancer/Malignant
HepG2 Liver Cancer/Malignant


miRNA Details
Name: hsa-miR-148b-5p
Sequence: aaguucuguuauacacucaggc
MirBase ID: MIMAT0004699
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
361-383
0.074
1
AP000462.2
hsa-miR-148b-5p
0.980
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000535704
Biotype: lincRNA
Gene id: ENSG00000255580
Gene Name: AP000462.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-148b-5p
Sequence: aaguucuguuauacacucaggc
MirBase ID: MIMAT0004699
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
84-98
0.041
8
8mer
382-405
0.024
0
6mer
714-736
0.009
6
RP11-248E9.5
hsa-miR-148b-5p
0.980
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000551280
Biotype: lincRNA
Gene id: ENSG00000257912
Gene Name: RP11-248E9.5
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-148b-5p
Sequence: aaguucuguuauacacucaggc
MirBase ID: MIMAT0004699
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
722-745
0.026
10
8mer
319-327
0.021
2
8mer
439-458
0.020
0
7mer
504-512
0.007
1
XLOC_010288
hsa-miR-148b-5p
0.980
mTTBlnEmP

Gene Details
Chromosome: chr13
Transcript: TCONS_00021525
Biotype: transcript isomorph
Gene id: XLOC_010288
Gene Name: XLOC_010288
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Kidney Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-148b-5p
Sequence: aaguucuguuauacacucaggc
MirBase ID: MIMAT0004699
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
529-542
0.016
1
7mer
452-467
0.015
1
7mer
377-392
0.013
0
7mer
1553-1574
0.013
0
7mer
1700-1722
0.010
0
6mer
1574-1590
0.003
0
6mer
1665-1687
0.002
0
6mer
1722-1738
0.002
0
RP3-323A16.1
hsa-miR-148b-5p
0.978
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000623959
Biotype: antisense
Gene id: ENSG00000279184
Gene Name: RP3-323A16.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-148b-5p
Sequence: aaguucuguuauacacucaggc
MirBase ID: MIMAT0004699
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
7358-7378
0.007
0
8mer
25025-25046
0.006
1
7mer
28927-28940
0.005
1
6mer
53943-53965
0.005
1
7mer
37938-37957
0.005
2
9mer
40540-40553
0.005
1
7mer
53041-53067
0.004
1
6mer
589-610
0.003
0
7mer
39603-39621
0.003
2
7mer
4603-4627
0.003
0
6mer
18945-18961
0.003
1
7mer
29259-29279
0.003
1
6mer
7132-7154
0.002
0
6mer
7776-7799
0.002
0
6mer
15391-15414
0.002
1
6mer
28187-28211
0.002
1
6mer
48433-48449
0.002
1
7mer
7851-7868
0.002
0
6mer
44711-44728
0.002
2
6mer
24691-24715
0.001
1
6mer
15065-15085
0.001
2
7mer
6281-6306
0.001
0
6mer
33942-33957
0.001
0
6mer
5993-6006
0.001
0
6mer
7517-7539
0.001
0
6mer
6028-6049
0.001
0
6mer
28966-28982
0.001
1
UCA1
hsa-miR-148b-5p
0.978
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000397381
Biotype: lincRNA
Gene id: ENSG00000214049
Gene Name: UCA1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
HeLa Cervix Cancer/Malignant
HepG2 Liver Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-148b-5p
Sequence: aaguucuguuauacacucaggc
MirBase ID: MIMAT0004699
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1188-1212
0.037
1
7mer
1393-1417
0.024
1
6mer
1588-1611
0.006
0
6mer
1199-1221
0.005
1
XLOC_013910
hsa-miR-148b-5p
0.976
mTTBlnEmP

Gene Details
Chromosome: chr21
Transcript: TCONS_00028992
Biotype: transcript isomorph
Gene id: XLOC_013910
Gene Name: XLOC_013910
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-148b-5p
Sequence: aaguucuguuauacacucaggc
MirBase ID: MIMAT0004699
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
860-877
0.071
1
LINC01088
hsa-miR-148b-5p
0.976
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000507476
Biotype: antisense
Gene id: ENSG00000249307
Gene Name: LINC01088
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-148b-5p
Sequence: aaguucuguuauacacucaggc
MirBase ID: MIMAT0004699
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
141-155
0.050
7
6mer
655-668
0.021
10
LINC01484
hsa-miR-148b-5p
0.975
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000517733
Biotype: lincRNA
Gene id: ENSG00000253686
Gene Name: LINC01484
UCSC graphic:
Expression:
  Cell Line Tissue Category
HeLa Cervix Cancer/Malignant
HepG2 Liver Cancer/Malignant


miRNA Details
Name: hsa-miR-148b-5p
Sequence: aaguucuguuauacacucaggc
MirBase ID: MIMAT0004699
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
428-450
0.071
1
AC068039.4
hsa-miR-148b-5p
0.975
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000416361
Biotype: antisense
Gene id: ENSG00000228389
Gene Name: AC068039.4
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-148b-5p
Sequence: aaguucuguuauacacucaggc
MirBase ID: MIMAT0004699
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
197-221
0.071
0
RP11-54A9.1
hsa-miR-148b-5p
0.975
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000550380
Biotype: lincRNA
Gene id: ENSG00000257219
Gene Name: RP11-54A9.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
HUVEC Blood Vessel Normal/Primary
HREpiC Kidney Normal/Primary
IMR90 Lung Embryonic/Fetal/Stem/Progenitor


miRNA Details
Name: hsa-miR-148b-5p
Sequence: aaguucuguuauacacucaggc
MirBase ID: MIMAT0004699
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
51-73
0.070
1
XLOC_001241
hsa-miR-148b-5p
0.974
mTTBlnEmP

Gene Details
Chromosome: chr1
Transcript: TCONS_00001853
Biotype: transcript isomorph
Gene id: XLOC_001241
Gene Name: XLOC_001241
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-148b-5p
Sequence: aaguucuguuauacacucaggc
MirBase ID: MIMAT0004699
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
20-34
0.070
1
RP4-568C11.4
hsa-miR-148b-5p
0.972
mTTBlnEmP

Gene Details
Chromosome: 20
Transcript: ENST00000620459
Biotype: lincRNA
Gene id: ENSG00000274173
Gene Name: RP4-568C11.4
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-148b-5p
Sequence: aaguucuguuauacacucaggc
MirBase ID: MIMAT0004699
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
564-581
0.037
0
6mer
376-400
0.016
0
6mer
58-77
0.016
0
XLOC_010769
hsa-miR-148b-5p
0.971
mTTBlnEmP

Gene Details
Chromosome: chr14
Transcript: TCONS_00022430
Biotype: transcript isomorph
Gene id: XLOC_010769
Gene Name: XLOC_010769
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Colon Normal/Primary
- Liver Normal/Primary
- Ovary Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-148b-5p
Sequence: aaguucuguuauacacucaggc
MirBase ID: MIMAT0004699
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
2189-2202
0.048
1
7mer
576-598
0.017
1
6mer
1251-1278
0.003
0
RP11-508N22.12
hsa-miR-148b-5p
0.967
mTTBlnEmP

Gene Details
Chromosome: 10
Transcript: ENST00000608335
Biotype: lincRNA
Gene id: ENSG00000272983
Gene Name: RP11-508N22.12
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-148b-5p
Sequence: aaguucuguuauacacucaggc
MirBase ID: MIMAT0004699
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
6902-6924
0.018
0
7mer
6934-6957
0.014
1
7mer
875-892
0.009
1
7mer
2727-2742
0.007
0
6mer
5526-5537
0.005
1
7mer
5688-5702
0.005
1
6mer
6153-6164
0.005
1
7mer
5116-5138
0.004
0
RP11-757G1.6
hsa-miR-148b-5p
0.967
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000512200
Biotype: lincRNA
Gene id: ENSG00000250508
Gene Name: RP11-757G1.6
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
HUVEC Blood Vessel Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-148b-5p
Sequence: aaguucuguuauacacucaggc
MirBase ID: MIMAT0004699
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
2612-2631
0.049
0
6mer
707-734
0.011
0
8mer
2125-2140
0.004
Not Conserved
6mer
1632-1645
0.002
Not Conserved
AC144568.2
hsa-miR-148b-5p
0.966
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000522481
Biotype: lincRNA
Gene id: ENSG00000253896
Gene Name: AC144568.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-148b-5p
Sequence: aaguucuguuauacacucaggc
MirBase ID: MIMAT0004699
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
437-458
0.048
1
6mer
259-277
0.017
1
XLOC_000633
hsa-miR-148b-5p
0.963
mTTBlnEmP

Gene Details
Chromosome: chr1
Transcript: TCONS_00001335
Biotype: transcript isomorph
Gene id: XLOC_000633
Gene Name: XLOC_000633
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
- Liver Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-148b-5p
Sequence: aaguucuguuauacacucaggc
MirBase ID: MIMAT0004699
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
108-120
0.044
2
7mer
174-187
0.008
2
7mer
6834-6851
0.005
0
6mer
269-290
0.004
1
6mer
6043-6064
0.001
1
6mer
3447-3470
0.001
0
Funded by:
We have placed cookies on your device to help make this website and the services we offer better. By using this site, you agree to the use of cookies. Learn more
I accept