LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-146a-5p

ENST00000623644

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Gene
miRNA
Score
DIANA Links
chr22-38_28785274-29006793.1
hsa-miR-146a-5p
1.000
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000623644
Biotype: lincRNA
Gene id: ENSG00000279978
Gene Name: chr22-38_28785274-29006793.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-146a-5p
Sequence: ugagaacugaauuccauggguu
MirBase ID: MIMAT0000449
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
127028-127047
0.015
11
8mer
82149-82160
0.013
0
9mer
1284-1291
0.009
1
8mer
132086-132111
0.009
1
7mer
74868-74878
0.008
9
7mer
69393-69412
0.008
1
8mer
192935-192954
0.007
Not Conserved
7mer
182164-182188
0.007
4
7mer
30351-30370
0.006
1
7mer
161390-161408
0.006
1
7mer
816-828
0.006
2
7mer
55507-55533
0.006
2
8mer
88874-88901
0.006
Not Conserved
9mer
171644-171661
0.006
1
8mer
31930-31948
0.005
Not Conserved
8mer
78613-78626
0.005
0
7mer
175560-175576
0.005
2
7mer
229072-229097
0.005
2
7mer
149616-149639
0.005
1
7mer
209667-209685
0.005
0
7mer
200727-200753
0.004
0
8mer
147240-147258
0.004
1
7mer
245591-245608
0.004
Not Conserved
7mer
166647-166664
0.004
1
7mer
123693-123715
0.004
6
7mer
59206-59217
0.004
2
7mer
184989-185009
0.004
1
7mer
129497-129517
0.004
1
7mer
61512-61527
0.004
3
7mer
58688-58700
0.004
1
7mer
189502-189521
0.004
2
8mer
10779-10799
0.003
4
8mer
61240-61267
0.003
0
9mer
65488-65507
0.003
0
6mer
216580-216605
0.003
8
7mer
58285-58303
0.003
2
7mer
116044-116054
0.003
1
8mer+wobble
66500-66519
0.003
1
7mer
7338-7356
0.003
1
9mer
136256-136275
0.003
1
7mer
176843-176860
0.003
5
6mer
108649-108674
0.003
5
7mer
65427-65446
0.003
1
6mer
725-750
0.003
3
6mer
50549-50572
0.002
5
6mer
222142-222151
0.002
3
6mer
123349-123365
0.002
6
6mer
157210-157223
0.002
3
6mer
13427-13447
0.002
0
6mer
58005-58030
0.002
5
6mer
99362-99379
0.002
4
6mer
2949-2974
0.002
3
6mer
20984-20999
0.002
2
8mer
179909-179925
0.002
1
6mer
244406-244429
0.002
1
6mer
99163-99187
0.002
1
6mer
56679-56696
0.002
4
8mer+mismatch
104401-104425
0.002
5
6mer
109885-109907
0.002
2
6mer
188266-188286
0.002
0
6mer
152245-152267
0.002
2
6mer
239012-239026
0.002
1
6mer
156941-156956
0.002
0
6mer
53501-53521
0.002
2
6mer
16869-16893
0.002
1
6mer
59750-59766
0.002
1
6mer
96301-96322
0.002
Not Conserved
6mer
153227-153243
0.002
0
6mer
28820-28846
0.002
1
6mer
183366-183380
0.002
3
6mer
42194-42208
0.002
1
6mer
206347-206374
0.002
Not Conserved
6mer
23995-24019
0.002
1
6mer
166118-166137
0.002
3
6mer
229884-229907
0.002
0
7mer
30655-30668
0.002
0
6mer
46908-46927
0.002
1
6mer
140798-140811
0.002
1
6mer
92782-92800
0.002
1
6mer
55808-55823
0.002
1
6mer
244929-244946
0.002
0
6mer
219574-219585
0.002
3
6mer
80391-80408
0.002
0
6mer
72435-72459
0.001
4
6mer
30841-30865
0.001
0
6mer
210536-210556
0.001
1
6mer
55067-55086
0.001
1
6mer
169855-169874
0.001
1
6mer
62428-62448
0.001
1
6mer
148205-148227
0.001
5
6mer
146156-146170
0.001
0
6mer
21480-21498
0.001
1
6mer
210804-210819
0.001
0
6mer
32222-32241
0.001
1
6mer
171930-171941
0.001
1
6mer
262949-262972
0.001
1
6mer
236763-236782
0.001
1
6mer
218670-218684
0.001
2
6mer
48668-48678
0.001
1
6mer
28499-28524
0.001
2
6mer
205565-205584
0.001
1
6mer
199919-199941
0.001
2
6mer
243587-243614
0.001
0
6mer
37207-37220
0.001
1
6mer
203666-203686
0.001
0
6mer
43461-43486
0.001
3
6mer
5846-5855
0.001
1
6mer
66177-66199
0.001
1
6mer
101163-101188
0.001
6
6mer
200946-200961
0.001
0
6mer
82745-82768
0.001
1
6mer
161922-161936
0.001
1
6mer
145876-145898
0.001
1
6mer
257449-257476
0.001
0
6mer
56139-56159
0.001
2
6mer
158797-158818
0.001
1
6mer
254720-254737
0.001
1
6mer
79514-79523
0.001
0
6mer
116367-116390
0.001
3
6mer
125177-125199
0.001
0
6mer
110702-110723
0.001
1
6mer
83137-83153
0.001
0
6mer
2693-2714
0.001
0
6mer
144434-144451
0.001
2
6mer
121741-121757
0.001
2
6mer
129597-129620
0.001
3
7mer
140855-140875
0.001
1
6mer
138297-138319
0.001
0
6mer
130137-130152
0.001
1
6mer
69632-69659
0.001
0
6mer
217677-217697
0.001
3
6mer
204758-204783
0.001
1
6mer
247406-247424
0.001
0
6mer
205670-205697
0.001
2
6mer
126225-126242
0.001
0
6mer
222297-222313
0.001
1
6mer
258431-258453
0.001
1
6mer
237247-237265
0.001
0
6mer
110761-110784
0.001
2
6mer
246244-246264
0.001
0
6mer
246493-246507
0.001
0
6mer
80443-80470
0.001
0
6mer
51436-51461
0.001
1
6mer
232935-232954
0.001
0
6mer
244469-244477
0.001
1
6mer
28844-28869
0.001
4
6mer
166665-166680
0.001
5
8mer+mismatch
206414-206431
0.001
1
6mer
125338-125355
0.001
Not Conserved
6mer
55810-55834
0.001
1
6mer
176916-176939
0.001
0
6mer
82225-82250
0.001
0
6mer
183386-183412
0.001
1
6mer
65518-65538
0.000
0
6mer
156954-156971
0.000
0
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