LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-146a-5p

ENST00000597346

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Gene
miRNA
Score
DIANA Links
KCNQ1OT1
hsa-miR-146a-5p
0.998
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000597346
Biotype: antisense
Gene id: ENSG00000269821
Gene Name: KCNQ1OT1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
HepG2 Liver Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-146a-5p
Sequence: ugagaacugaauuccauggguu
MirBase ID: MIMAT0000449
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
90840-90860
0.017
0
7mer
43935-43962
0.012
7
7mer
53680-53702
0.009
4
9mer
87269-87288
0.005
2
8mer
81670-81687
0.003
1
7mer
14985-15009
0.003
1
8mer
54726-54744
0.003
1
7mer
43215-43226
0.003
0
7mer
85608-85629
0.003
0
6mer
91480-91504
0.003
0
6mer
91232-91257
0.002
1
7mer
26088-26108
0.002
0
6mer
70628-70649
0.002
0
6mer
22216-22236
0.002
1
6mer
67922-67926
0.002
1
6mer
33113-33139
0.002
0
8mer
91401-91419
0.002
Not Conserved
6mer
21647-21668
0.002
1
6mer
34789-34812
0.002
0
6mer
46429-46456
0.002
1
6mer
29315-29339
0.002
0
6mer
42946-42962
0.002
1
6mer
40302-40322
0.002
1
6mer
12426-12450
0.002
1
6mer
8514-8534
0.002
0
6mer
63407-63426
0.002
1
6mer
12669-12696
0.002
0
6mer
63155-63178
0.002
2
6mer
91375-91400
0.001
1
6mer
91258-91272
0.001
1
6mer
59158-59179
0.001
1
6mer
76745-76764
0.001
2
6mer
8760-8786
0.001
1
6mer
79423-79447
0.001
2
6mer
83341-83362
0.001
1
6mer
80132-80150
0.001
1
6mer
39237-39256
0.001
0
6mer
31389-31412
0.001
0
8mer+wobble
91289-91314
0.001
0
6mer
77446-77472
0.001
1
6mer
79263-79277
0.001
1
6mer
34685-34706
0.001
0
6mer
76393-76404
0.001
1
6mer
54945-54971
0.001
1
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