LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-145-5p

ENST00000623644

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Gene
miRNA
Score
DIANA Links
chr22-38_28785274-29006793.1
hsa-miR-145-5p
1.000
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000623644
Biotype: lincRNA
Gene id: ENSG00000279978
Gene Name: chr22-38_28785274-29006793.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-145-5p
Sequence: guccaguuuucccaggaaucccu
MirBase ID: MIMAT0000437
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
240819-240838
0.025
Not Conserved
8mer
57882-57906
0.017
1
8mer
106568-106575
0.013
3
8mer
154594-154610
0.012
0
9mer
18506-18532
0.011
1
8mer
210329-210347
0.011
4
9mer
187016-187039
0.009
3
8mer
164080-164105
0.008
6
9mer
250150-250162
0.007
0
8mer
121915-121936
0.007
1
8mer
52747-52763
0.006
1
7mer
12528-12549
0.006
1
6mer
168710-168725
0.005
12
7mer
209544-209556
0.005
1
7mer
87983-88008
0.005
1
6mer
195093-195119
0.004
9
7mer
207224-207243
0.004
12
8mer
87892-87914
0.003
1
7mer
139143-139169
0.003
1
7mer
186677-186701
0.003
1
6mer
78941-78960
0.003
7
7mer
23715-23726
0.003
0
7mer
55858-55879
0.003
1
7mer
150505-150519
0.003
2
7mer
140334-140346
0.003
0
7mer
245817-245833
0.003
0
8mer
106156-106174
0.003
0
6mer
35637-35648
0.003
3
6mer
248781-248806
0.003
0
7mer
88246-88271
0.002
1
7mer
26017-26037
0.002
1
6mer
163031-163046
0.002
2
6mer
229808-229823
0.002
0
6mer
13663-13667
0.002
0
6mer
28415-28425
0.002
1
6mer
239275-239298
0.002
1
7mer
99306-99331
0.002
0
6mer
13072-13092
0.002
6
7mer
250812-250838
0.002
0
7mer
2446-2464
0.002
1
6mer
126235-126260
0.002
0
7mer
234298-234308
0.002
1
6mer
75497-75523
0.002
1
6mer
83619-83641
0.002
1
7mer
263612-263626
0.002
Not Conserved
7mer
116458-116485
0.002
1
6mer
40943-40966
0.002
0
6mer
64419-64442
0.002
1
6mer
117018-117034
0.002
0
6mer
137064-137077
0.002
0
6mer
30003-30030
0.002
2
6mer
52741-52750
0.002
0
6mer
54163-54180
0.002
1
6mer
253930-253956
0.002
1
6mer
204965-204979
0.002
0
6mer
154391-154418
0.002
2
6mer
183494-183511
0.002
3
6mer
46106-46133
0.002
1
6mer
207387-207406
0.002
3
7mer
124578-124599
0.002
0
6mer
109170-109192
0.002
1
6mer
104559-104579
0.002
0
7mer
7130-7155
0.002
1
6mer
87394-87411
0.002
0
6mer
235570-235582
0.001
1
6mer
107171-107188
0.001
Not Conserved
6mer
64736-64756
0.001
0
6mer
219695-219711
0.001
7
6mer
137433-137460
0.001
1
6mer
95890-95899
0.001
2
6mer
141679-141690
0.001
0
6mer
118382-118401
0.001
2
6mer
43573-43598
0.001
1
6mer
241789-241816
0.001
1
6mer
227011-227037
0.001
0
6mer
159622-159642
0.001
1
6mer
225924-225947
0.001
2
6mer
208981-209002
0.001
0
6mer
46622-46641
0.001
0
6mer
212405-212431
0.001
0
6mer
75551-75574
0.001
2
6mer
198298-198307
0.001
1
6mer
254209-254233
0.001
0
6mer
118108-118125
0.001
0
6mer
57995-58014
0.001
1
6mer
96431-96448
0.001
2
6mer
116599-116619
0.001
6
6mer
257173-257192
0.001
1
6mer
257065-257090
0.001
1
6mer
175422-175442
0.001
1
6mer
239416-239442
0.001
1
6mer
92197-92220
0.001
1
6mer
265360-265382
0.001
1
6mer
216110-216121
0.001
1
6mer
245635-245662
0.001
0
6mer
48940-48956
0.001
2
6mer
180865-180891
0.001
0
6mer
144231-144256
0.001
2
6mer
62673-62692
0.001
1
6mer
22104-22130
0.001
2
6mer
236138-236164
0.001
0
6mer
115945-115966
0.001
1
6mer
55425-55446
0.001
0
6mer
141413-141430
0.001
0
6mer
137144-137163
0.001
1
6mer
212485-212497
0.001
1
6mer
32932-32951
0.001
1
6mer
92252-92275
0.001
0
6mer
140453-140478
0.001
0
6mer
83668-83679
0.000
2
6mer
240618-240635
0.000
Not Conserved
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