LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-145-5p

ENST00000597346

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Gene
miRNA
Score
DIANA Links
KCNQ1OT1
hsa-miR-145-5p
1.000
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000597346
Biotype: antisense
Gene id: ENSG00000269821
Gene Name: KCNQ1OT1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
HepG2 Liver Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-145-5p
Sequence: guccaguuuucccaggaaucccu
MirBase ID: MIMAT0000437
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
40279-40298
0.020
1
9mer
5283-5307
0.012
1
8mer
70071-70085
0.009
1
8mer
60483-60506
0.009
2
8mer
21227-21244
0.009
1
8mer
9046-9063
0.009
1
8mer
27956-27974
0.007
0
7mer
22998-23014
0.005
1
8mer
27050-27060
0.005
0
7mer
50647-50660
0.005
1
7mer
30665-30681
0.004
0
7mer
54216-54236
0.004
5
8mer
31754-31771
0.004
Not Conserved
6mer
51202-51212
0.003
1
6mer
12376-12388
0.003
1
6mer
48609-48632
0.002
0
6mer
43725-43736
0.002
4
6mer
63893-63903
0.002
2
7mer
83541-83553
0.002
1
6mer
40557-40569
0.002
0
6mer
39408-39434
0.002
0
6mer
10875-10879
0.002
1
7mer
84732-84758
0.002
0
6mer
58514-58523
0.002
3
6mer
36679-36704
0.002
0
6mer
71395-71409
0.002
1
6mer
32854-32874
0.002
0
6mer
68033-68050
0.002
1
6mer
39674-39695
0.001
0
6mer
50870-50893
0.001
1
6mer
84269-84292
0.001
1
6mer
21621-21637
0.001
1
7mer
6275-6292
0.001
1
6mer
83375-83393
0.001
1
6mer
84869-84893
0.001
0
6mer
55767-55791
0.001
0
6mer
64425-64448
0.001
1
6mer
83747-83769
0.001
1
6mer
76054-76073
0.001
3
6mer
43251-43275
0.001
1
6mer
52516-52527
0.001
0
6mer
70896-70921
0.001
1
6mer
90386-90409
0.001
1
6mer
37089-37104
0.001
0
6mer
55733-55753
0.000
1
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