LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-145-5p


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Gene
miRNA
Score
DIANA Links
AC000099.1
hsa-miR-145-5p
0.920
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000413812
Biotype: antisense
Gene id: ENSG00000236340
Gene Name: AC000099.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-145-5p
Sequence: guccaguuuucccaggaaucccu
MirBase ID: MIMAT0000437
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
47-72
0.043
1
6mer
95-110
0.004
3
6mer
899-916
0.003
1
LINC01532
hsa-miR-145-5p
0.919
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000591143
Biotype: lincRNA
Gene id: ENSG00000267014
Gene Name: LINC01532
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-145-5p
Sequence: guccaguuuucccaggaaucccu
MirBase ID: MIMAT0000437
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
1653-1679
0.050
0
MROH7-TTC4
hsa-miR-145-5p
0.918
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: NR_037639.1
Biotype: sense
Gene id: NR_037639.1 (gene)
Gene Name: MROH7-TTC4
UCSC graphic: -
Expression: -


miRNA Details
Name: hsa-miR-145-5p
Sequence: guccaguuuucccaggaaucccu
MirBase ID: MIMAT0000437
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
6010-6032
0.036
1
7mer
412-428
0.006
3
6mer
1043-1061
0.003
1
6mer
729-746
0.002
1
6mer
1422-1448
0.002
1
6mer
2391-2415
0.001
5
6mer
1894-1919
0.001
2
RP1-309I22.2
hsa-miR-145-5p
0.918
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000624184
Biotype: sense_overlapping
Gene id: ENSG00000279338
Gene Name: RP1-309I22.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-145-5p
Sequence: guccaguuuucccaggaaucccu
MirBase ID: MIMAT0000437
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
28778-28798
0.019
1
8mer
9233-9243
0.006
1
6mer
28446-28460
0.005
2
6mer
22507-22532
0.003
8
7mer
19713-19738
0.002
1
6mer
15144-15160
0.002
3
6mer
21255-21272
0.002
4
6mer
864-887
0.002
1
6mer
1182-1195
0.002
0
6mer
1347-1363
0.002
1
6mer
20817-20838
0.002
0
6mer
15679-15698
0.001
1
6mer
12190-12202
0.001
1
6mer
26421-26432
0.001
1
XLOC_010686
hsa-miR-145-5p
0.918
mTTBlnEmP

Gene Details
Chromosome: chr13
Transcript: TCONS_00021683
Biotype: transcript isomorph
Gene id: XLOC_010686
Gene Name: XLOC_010686
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-145-5p
Sequence: guccaguuuucccaggaaucccu
MirBase ID: MIMAT0000437
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
26-39
0.048
0
6mer
678-693
0.002
0
RP11-320M16.2
hsa-miR-145-5p
0.917
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000557371
Biotype: antisense
Gene id: ENSG00000258580
Gene Name: RP11-320M16.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant


miRNA Details
Name: hsa-miR-145-5p
Sequence: guccaguuuucccaggaaucccu
MirBase ID: MIMAT0000437
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
421-443
0.046
0
6mer
66-85
0.005
1
AC012594.1
hsa-miR-145-5p
0.917
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000595528
Biotype: antisense
Gene id: ENSG00000231898
Gene Name: AC012594.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-145-5p
Sequence: guccaguuuucccaggaaucccu
MirBase ID: MIMAT0000437
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
43-52
0.044
3
6mer
279-300
0.006
2
AC068499.10
hsa-miR-145-5p
0.916
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000594805
Biotype: antisense
Gene id: ENSG00000268650
Gene Name: AC068499.10
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant


miRNA Details
Name: hsa-miR-145-5p
Sequence: guccaguuuucccaggaaucccu
MirBase ID: MIMAT0000437
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
165-186
0.050
6
XXbac-B33L19.4
hsa-miR-145-5p
0.915
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000458154
Biotype: lincRNA
Gene id: ENSG00000235578
Gene Name: XXbac-B33L19.4
UCSC graphic:
Expression:
  Cell Line Tissue Category
Fibroblasts Lung Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-145-5p
Sequence: guccaguuuucccaggaaucccu
MirBase ID: MIMAT0000437
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
60-74
0.050
1
RP11-164P12.3
hsa-miR-145-5p
0.915
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000514269
Biotype: antisense
Gene id: ENSG00000251455
Gene Name: RP11-164P12.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-145-5p
Sequence: guccaguuuucccaggaaucccu
MirBase ID: MIMAT0000437
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1884-1904
0.033
3
7mer
2166-2191
0.011
2
6mer
2016-2024
0.004
1
6mer
1340-1344
0.002
0
CTA-407F11.8
hsa-miR-145-5p
0.915
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000412773
Biotype: antisense
Gene id: ENSG00000234884
Gene Name: CTA-407F11.8
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-145-5p
Sequence: guccaguuuucccaggaaucccu
MirBase ID: MIMAT0000437
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
455-481
0.043
4
6mer
228-253
0.007
1
RP11-76I14.1
hsa-miR-145-5p
0.913
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000545549
Biotype: lincRNA
Gene id: ENSG00000256637
Gene Name: RP11-76I14.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-145-5p
Sequence: guccaguuuucccaggaaucccu
MirBase ID: MIMAT0000437
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
398-412
0.049
5
RP11-736K20.6
hsa-miR-145-5p
0.913
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000531827
Biotype: lincRNA
Gene id: ENSG00000246523
Gene Name: RP11-736K20.6
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
- Liver Normal/Primary
Fibroblasts Lung Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-145-5p
Sequence: guccaguuuucccaggaaucccu
MirBase ID: MIMAT0000437
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
782-802
0.042
1
7mer
361-378
0.008
0
XLOC_010109
hsa-miR-145-5p
0.911
mTTBlnEmP

Gene Details
Chromosome: chr12
Transcript: TCONS_00020821
Biotype: transcript isomorph
Gene id: XLOC_010109
Gene Name: XLOC_010109
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
- Heart Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
- Kidney Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-145-5p
Sequence: guccaguuuucccaggaaucccu
MirBase ID: MIMAT0000437
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
114-136
0.025
3
7mer
2991-3009
0.007
1
6mer
328-345
0.005
2
6mer
4748-4771
0.004
1
6mer
91-115
0.004
2
6mer
1121-1147
0.003
1
6mer
2304-2331
0.001
0
RP11-424D14.1
hsa-miR-145-5p
0.911
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000425517
Biotype: lincRNA
Gene id: ENSG00000223883
Gene Name: RP11-424D14.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-145-5p
Sequence: guccaguuuucccaggaaucccu
MirBase ID: MIMAT0000437
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
447-463
0.049
1
LINC00353
hsa-miR-145-5p
0.911
mTTBlnEmP

Gene Details
Chromosome: 13
Transcript: ENST00000435401
Biotype: lincRNA
Gene id: ENSG00000236176
Gene Name: LINC00353
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-145-5p
Sequence: guccaguuuucccaggaaucccu
MirBase ID: MIMAT0000437
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
26-39
0.049
0
XLOC_001212
hsa-miR-145-5p
0.911
mTTBlnEmP

Gene Details
Chromosome: chr1
Transcript: TCONS_00001829
Biotype: transcript isomorph
Gene id: XLOC_001212
Gene Name: XLOC_001212
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Liver Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-145-5p
Sequence: guccaguuuucccaggaaucccu
MirBase ID: MIMAT0000437
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
886-913
0.019
2
7mer
1069-1095
0.013
3
6mer
405-425
0.007
3
6mer
234-244
0.005
2
6mer
634-661
0.003
2
6mer
750-768
0.001
0
XLOC_005164
hsa-miR-145-5p
0.911
mTTBlnEmP

Gene Details
Chromosome: chr6
Transcript: TCONS_00011688
Biotype: transcript isomorph
Gene id: XLOC_005164
Gene Name: XLOC_005164
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary
- Breast Normal/Primary
- Liver Normal/Primary
- Lung Normal/Primary
- Ovary Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-145-5p
Sequence: guccaguuuucccaggaaucccu
MirBase ID: MIMAT0000437
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
3488-3507
0.026
1
8mer
3988-4012
0.023
2
RP11-93H12.4
hsa-miR-145-5p
0.910
mTTBlnEmP

Gene Details
Chromosome: 10
Transcript: ENST00000474115
Biotype: antisense
Gene id: ENSG00000270002
Gene Name: RP11-93H12.4
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-145-5p
Sequence: guccaguuuucccaggaaucccu
MirBase ID: MIMAT0000437
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
219-240
0.024
1
7mer
884-899
0.006
3
7mer
1761-1781
0.006
4
7mer
2197-2214
0.006
1
6mer
81-91
0.004
1
6mer
615-636
0.002
1
RP1-166H4.2
hsa-miR-145-5p
0.910
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000563807
Biotype: lincRNA
Gene id: ENSG00000261080
Gene Name: RP1-166H4.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-145-5p
Sequence: guccaguuuucccaggaaucccu
MirBase ID: MIMAT0000437
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
19-43
0.049
2
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