LncBase Predicted v.2
Help
Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
Bulk download:
We have updated the bulk download module, which simplifies the download process! Please find the new online form by following this link
Deprecated!
This version is deprecated. Users are strongly advised to only use the latest, up-to-date versions of DIANA-Tools and Databases.
Please follow this link to navigate to the latest database version.

hsa-miR-145-5p


or   Search by location
Loading... Please wait, this might take a few seconds...



Go to Experimental module
Filters

Gene
miRNA
Score
DIANA Links
XLOC_004539
hsa-miR-145-5p
0.938
mTTBlnEmP

Gene Details
Chromosome: chr5
Transcript: TCONS_00010082
Biotype: transcript isomorph
Gene id: XLOC_004539
Gene Name: XLOC_004539
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-145-5p
Sequence: guccaguuuucccaggaaucccu
MirBase ID: MIMAT0000437
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1810-1830
0.039
5
7mer
202-223
0.012
1
6mer
813-818
0.003
1
6mer
604-616
0.002
Not Conserved
RP11-495P10.7
hsa-miR-145-5p
0.938
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000445201
Biotype: lincRNA
Gene id: ENSG00000244252
Gene Name: RP11-495P10.7
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-145-5p
Sequence: guccaguuuucccaggaaucccu
MirBase ID: MIMAT0000437
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
301-326
0.055
1
XLOC_005339
hsa-miR-145-5p
0.938
mTTBlnEmP

Gene Details
Chromosome: chr6
Transcript: TCONS_00011852
Biotype: transcript isomorph
Gene id: XLOC_005339
Gene Name: XLOC_005339
UCSC graphic: -
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-145-5p
Sequence: guccaguuuucccaggaaucccu
MirBase ID: MIMAT0000437
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
125-142
0.053
1
6mer
703-726
0.002
0
XLOC_004197
hsa-miR-145-5p
0.938
mTTBlnEmP

Gene Details
Chromosome: chr4
Transcript: TCONS_00008681
Biotype: transcript isomorph
Gene id: XLOC_004197
Gene Name: XLOC_004197
UCSC graphic: -
Expression:
  Cell Line Tissue Category
Fibroblasts Foreskin Normal/Primary
- Kidney Normal/Primary
- Prostate Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-145-5p
Sequence: guccaguuuucccaggaaucccu
MirBase ID: MIMAT0000437
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
228-249
0.048
6
7mer
1472-1484
0.007
0
RP11-479O17.10
hsa-miR-145-5p
0.936
mTTBlnEmP

Gene Details
Chromosome: 10
Transcript: ENST00000608229
Biotype: lincRNA
Gene id: ENSG00000273372
Gene Name: RP11-479O17.10
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-145-5p
Sequence: guccaguuuucccaggaaucccu
MirBase ID: MIMAT0000437
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
4720-4737
0.044
1
8mer
4521-4546
0.011
Not Conserved
LOC729506
hsa-miR-145-5p
0.936
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: NR_039984.1
Biotype: lincRNA
Gene id: NR_039984.1 (gene)
Gene Name: LOC729506
UCSC graphic: -
Expression: -


miRNA Details
Name: hsa-miR-145-5p
Sequence: guccaguuuucccaggaaucccu
MirBase ID: MIMAT0000437
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer+wobble
1432-1459
0.021
1
7mer
467-477
0.014
1
6mer
1312-1331
0.007
1
6mer
60-85
0.006
0
6mer
211-236
0.004
1
6mer
600-620
0.003
1
AC079586.1
hsa-miR-145-5p
0.935
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000375987
Biotype: lincRNA
Gene id: ENSG00000204460
Gene Name: AC079586.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-145-5p
Sequence: guccaguuuucccaggaaucccu
MirBase ID: MIMAT0000437
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
1714-1734
0.025
0
8mer
1219-1243
0.011
0
7mer
921-946
0.005
0
6mer
2011-2031
0.004
0
6mer
718-743
0.003
0
6mer
240-259
0.003
1
6mer
1071-1096
0.002
1
6mer
1142-1167
0.001
0
RP11-480D4.1
hsa-miR-145-5p
0.935
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000501071
Biotype: lincRNA
Gene id: ENSG00000245729
Gene Name: RP11-480D4.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-145-5p
Sequence: guccaguuuucccaggaaucccu
MirBase ID: MIMAT0000437
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer+wobble
1434-1461
0.020
1
7mer
469-479
0.014
1
6mer
1314-1333
0.007
1
6mer
62-87
0.006
0
6mer
213-238
0.004
1
6mer
602-622
0.003
1
CTD-2308B18.2
hsa-miR-145-5p
0.935
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000510570
Biotype: lincRNA
Gene id: ENSG00000250438
Gene Name: CTD-2308B18.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-145-5p
Sequence: guccaguuuucccaggaaucccu
MirBase ID: MIMAT0000437
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
157-171
0.048
3
6mer
137-161
0.006
1
XLOC_004428
hsa-miR-145-5p
0.934
mTTBlnEmP

Gene Details
Chromosome: chr5
Transcript: TCONS_00009425
Biotype: transcript isomorph
Gene id: XLOC_004428
Gene Name: XLOC_004428
UCSC graphic: -
Expression: -


miRNA Details
Name: hsa-miR-145-5p
Sequence: guccaguuuucccaggaaucccu
MirBase ID: MIMAT0000437
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
25-46
0.054
3
XLOC_003704
hsa-miR-145-5p
0.934
mTTBlnEmP

Gene Details
Chromosome: chr4
Transcript: TCONS_00008261
Biotype: transcript isomorph
Gene id: XLOC_003704
Gene Name: XLOC_003704
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Breast Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-145-5p
Sequence: guccaguuuucccaggaaucccu
MirBase ID: MIMAT0000437
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
445-462
0.025
2
8mer
1241-1257
0.013
1
7mer
1579-1584
0.012
2
6mer
2028-2054
0.004
1
RP11-634H22.1
hsa-miR-145-5p
0.934
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000608266
Biotype: antisense
Gene id: ENSG00000273391
Gene Name: RP11-634H22.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant


miRNA Details
Name: hsa-miR-145-5p
Sequence: guccaguuuucccaggaaucccu
MirBase ID: MIMAT0000437
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
19-42
0.054
1
AC118653.2
hsa-miR-145-5p
0.934
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000450826
Biotype: lincRNA
Gene id: ENSG00000225818
Gene Name: AC118653.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-145-5p
Sequence: guccaguuuucccaggaaucccu
MirBase ID: MIMAT0000437
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
14-34
0.054
0
RP11-305O6.3
hsa-miR-145-5p
0.933
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000545709
Biotype: sense_intronic
Gene id: ENSG00000250280
Gene Name: RP11-305O6.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-145-5p
Sequence: guccaguuuucccaggaaucccu
MirBase ID: MIMAT0000437
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
213-234
0.028
0
7mer
3116-3126
0.015
0
8mer
1303-1323
0.008
1
7mer
1758-1772
0.004
0
LINC01505
hsa-miR-145-5p
0.933
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000444985
Biotype: lincRNA
Gene id: ENSG00000234229
Gene Name: LINC01505
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Breast Normal/Primary
- Colon Normal/Primary
- Heart Normal/Primary
- Lymph Node Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-145-5p
Sequence: guccaguuuucccaggaaucccu
MirBase ID: MIMAT0000437
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
292-307
0.020
6
6mer
55-78
0.019
11
7mer
391-405
0.007
1
6mer
326-351
0.005
7
6mer
877-897
0.003
0
RP11-386G11.10
hsa-miR-145-5p
0.933
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000547387
Biotype: antisense
Gene id: ENSG00000258017
Gene Name: RP11-386G11.10
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
A549 Lung Cancer/Malignant
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-145-5p
Sequence: guccaguuuucccaggaaucccu
MirBase ID: MIMAT0000437
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
259-282
0.054
13
RP11-25I9.2
hsa-miR-145-5p
0.933
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000526041
Biotype: lincRNA
Gene id: ENSG00000255528
Gene Name: RP11-25I9.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-145-5p
Sequence: guccaguuuucccaggaaucccu
MirBase ID: MIMAT0000437
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
135-152
0.048
1
6mer
232-236
0.006
0
NR2F1-AS1
hsa-miR-145-5p
0.931
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000606233
Biotype: antisense
Gene id: ENSG00000237187
Gene Name: NR2F1-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-145-5p
Sequence: guccaguuuucccaggaaucccu
MirBase ID: MIMAT0000437
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
7-21
0.050
1
6mer
1612-1633
0.003
1
XLOC_008149
hsa-miR-145-5p
0.931
mTTBlnEmP

Gene Details
Chromosome: chrX
Transcript: TCONS_00017313
Biotype: transcript isomorph
Gene id: XLOC_008149
Gene Name: XLOC_008149
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
HMEpC Mammary Gland Normal/Primary
- Prostate Normal/Primary
- Thyroid Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-145-5p
Sequence: guccaguuuucccaggaaucccu
MirBase ID: MIMAT0000437
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
210-225
0.053
8
XLOC_008668
hsa-miR-145-5p
0.930
mTTBlnEmP

Gene Details
Chromosome: chr10
Transcript: TCONS_00018386
Biotype: transcript isomorph
Gene id: XLOC_008668
Gene Name: XLOC_008668
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-145-5p
Sequence: guccaguuuucccaggaaucccu
MirBase ID: MIMAT0000437
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1435-1452
0.045
2
6mer
50-66
0.006
0
7mer
478-501
0.002
Not Conserved
Funded by:
We have placed cookies on your device to help make this website and the services we offer better. By using this site, you agree to the use of cookies. Learn more
I accept