LncBase Predicted v.2
Help
Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
Bulk download:
We have updated the bulk download module, which simplifies the download process! Please find the new online form by following this link
Deprecated!
This version is deprecated. Users are strongly advised to only use the latest, up-to-date versions of DIANA-Tools and Databases.
Please follow this link to navigate to the latest database version.

hsa-miR-145-5p


or   Search by location
Loading... Please wait, this might take a few seconds...



Go to Experimental module
Filters

Gene
miRNA
Score
DIANA Links
RP3-418C23.2
hsa-miR-145-5p
0.970
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000457513
Biotype: lincRNA
Gene id: ENSG00000226684
Gene Name: RP3-418C23.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-145-5p
Sequence: guccaguuuucccaggaaucccu
MirBase ID: MIMAT0000437
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
320-346
0.068
8
XLOC_000648
hsa-miR-145-5p
0.969
mTTBlnEmP

Gene Details
Chromosome: chr1
Transcript: TCONS_00001360
Biotype: transcript isomorph
Gene id: XLOC_000648
Gene Name: XLOC_000648
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Brain Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-145-5p
Sequence: guccaguuuucccaggaaucccu
MirBase ID: MIMAT0000437
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
979-995
0.053
1
6mer
511-532
0.015
1
RP11-76I14.1
hsa-miR-145-5p
0.968
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000537492
Biotype: lincRNA
Gene id: ENSG00000256637
Gene Name: RP11-76I14.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-145-5p
Sequence: guccaguuuucccaggaaucccu
MirBase ID: MIMAT0000437
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
135-149
0.066
5
RP11-744J10.3
hsa-miR-145-5p
0.967
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000519557
Biotype: lincRNA
Gene id: ENSG00000253479
Gene Name: RP11-744J10.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-145-5p
Sequence: guccaguuuucccaggaaucccu
MirBase ID: MIMAT0000437
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
20-46
0.066
1
RP11-20B24.5
hsa-miR-145-5p
0.967
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000592890
Biotype: antisense
Gene id: ENSG00000265845
Gene Name: RP11-20B24.5
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-145-5p
Sequence: guccaguuuucccaggaaucccu
MirBase ID: MIMAT0000437
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
84-99
0.066
5
LOC100190986
hsa-miR-145-5p
0.966
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: NR_024456.1
Biotype: sense
Gene id: NR_024456.1 (gene)
Gene Name: LOC100190986
UCSC graphic: -
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-145-5p
Sequence: guccaguuuucccaggaaucccu
MirBase ID: MIMAT0000437
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
908-919
0.061
0
6mer
1948-1967
0.004
Not Conserved
XLOC_001913
hsa-miR-145-5p
0.966
mTTBlnEmP

Gene Details
Chromosome: chr2
Transcript: TCONS_00004063
Biotype: transcript isomorph
Gene id: XLOC_001913
Gene Name: XLOC_001913
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-145-5p
Sequence: guccaguuuucccaggaaucccu
MirBase ID: MIMAT0000437
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
37-58
0.062
1
6mer
138-165
0.003
0
RP3-340N1.2
hsa-miR-145-5p
0.965
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000417884
Biotype: lincRNA
Gene id: ENSG00000227066
Gene Name: RP3-340N1.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant


miRNA Details
Name: hsa-miR-145-5p
Sequence: guccaguuuucccaggaaucccu
MirBase ID: MIMAT0000437
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
655-673
0.053
1
6mer
655-677
0.012
1
LINC01089
hsa-miR-145-5p
0.965
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000543334
Biotype: lincRNA
Gene id: ENSG00000212694
Gene Name: LINC01089
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant
LCLBACD1 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-145-5p
Sequence: guccaguuuucccaggaaucccu
MirBase ID: MIMAT0000437
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
643-662
0.065
9
RP3-418C23.2
hsa-miR-145-5p
0.964
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000574739
Biotype: lincRNA
Gene id: ENSG00000226684
Gene Name: RP3-418C23.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-145-5p
Sequence: guccaguuuucccaggaaucccu
MirBase ID: MIMAT0000437
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
426-452
0.064
8
RP11-76I14.1
hsa-miR-145-5p
0.962
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000544869
Biotype: lincRNA
Gene id: ENSG00000256637
Gene Name: RP11-76I14.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-145-5p
Sequence: guccaguuuucccaggaaucccu
MirBase ID: MIMAT0000437
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
114-128
0.064
5
RP11-116N8.4
hsa-miR-145-5p
0.962
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000546376
Biotype: lincRNA
Gene id: ENSG00000257826
Gene Name: RP11-116N8.4
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-145-5p
Sequence: guccaguuuucccaggaaucccu
MirBase ID: MIMAT0000437
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
320-344
0.045
4
7mer
698-723
0.018
3
RP11-438B23.2
hsa-miR-145-5p
0.962
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000566293
Biotype: sense_overlapping
Gene id: ENSG00000260412
Gene Name: RP11-438B23.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant


miRNA Details
Name: hsa-miR-145-5p
Sequence: guccaguuuucccaggaaucccu
MirBase ID: MIMAT0000437
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
6023-6047
0.061
2
6mer
895-919
0.002
1
XLOC_010695
hsa-miR-145-5p
0.961
mTTBlnEmP

Gene Details
Chromosome: chr13
Transcript: TCONS_00022087
Biotype: transcript isomorph
Gene id: XLOC_010695
Gene Name: XLOC_010695
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary
Fibroblasts Lung Normal/Primary


miRNA Details
Name: hsa-miR-145-5p
Sequence: guccaguuuucccaggaaucccu
MirBase ID: MIMAT0000437
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
904-921
0.063
14
XLOC_012416
hsa-miR-145-5p
0.961
mTTBlnEmP

Gene Details
Chromosome: chr17
Transcript: TCONS_00025586
Biotype: transcript isomorph
Gene id: XLOC_012416
Gene Name: XLOC_012416
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-145-5p
Sequence: guccaguuuucccaggaaucccu
MirBase ID: MIMAT0000437
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
406-421
0.043
0
8mer
379-386
0.020
0
XLOC_003017
hsa-miR-145-5p
0.961
mTTBlnEmP

Gene Details
Chromosome: chr3
Transcript: TCONS_00006396
Biotype: transcript isomorph
Gene id: XLOC_003017
Gene Name: XLOC_003017
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Brain Normal/Primary
- Kidney Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-145-5p
Sequence: guccaguuuucccaggaaucccu
MirBase ID: MIMAT0000437
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
108-128
0.063
6
RP11-76I14.1
hsa-miR-145-5p
0.961
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000609391
Biotype: lincRNA
Gene id: ENSG00000256637
Gene Name: RP11-76I14.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-145-5p
Sequence: guccaguuuucccaggaaucccu
MirBase ID: MIMAT0000437
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
98-109
0.063
5
RP3-340N1.2
hsa-miR-145-5p
0.960
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000431027
Biotype: lincRNA
Gene id: ENSG00000227066
Gene Name: RP3-340N1.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant


miRNA Details
Name: hsa-miR-145-5p
Sequence: guccaguuuucccaggaaucccu
MirBase ID: MIMAT0000437
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2067-2085
0.050
1
6mer
2067-2089
0.013
1
XLOC_005361
hsa-miR-145-5p
0.960
mTTBlnEmP

Gene Details
Chromosome: chr6
Transcript: TCONS_00012534
Biotype: transcript isomorph
Gene id: XLOC_005361
Gene Name: XLOC_005361
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
K562 Blood Cancer/Malignant
- Brain Normal/Primary
SK-N-SH Brain Cancer/Malignant
- Breast Normal/Primary
- Colon Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
- Kidney Normal/Primary
- Liver Normal/Primary
HepG2 Liver Cancer/Malignant
Fibroblasts Lung Normal/Primary
- Lung Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-145-5p
Sequence: guccaguuuucccaggaaucccu
MirBase ID: MIMAT0000437
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
664-688
0.053
3
7mer
708-718
0.010
0
RP3-323A16.1
hsa-miR-145-5p
0.960
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000623959
Biotype: antisense
Gene id: ENSG00000279184
Gene Name: RP3-323A16.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-145-5p
Sequence: guccaguuuucccaggaaucccu
MirBase ID: MIMAT0000437
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
16245-16264
0.012
1
8mer
29258-29283
0.008
1
8mer
16295-16315
0.007
1
8mer
8755-8768
0.006
0
7mer
51780-51807
0.003
2
7mer
15072-15088
0.002
1
6mer
12983-13003
0.002
3
6mer
4387-4406
0.002
1
6mer
23925-23929
0.002
1
7mer
36393-36405
0.002
0
6mer
13420-13442
0.002
4
6mer
15786-15803
0.002
0
6mer
17113-17121
0.002
2
6mer
15517-15531
0.002
1
6mer
19120-19130
0.002
1
6mer
20208-20235
0.002
1
6mer
50295-50315
0.001
1
6mer
31229-31255
0.001
0
6mer
28220-28226
0.001
Not Conserved
6mer
1399-1409
0.001
1
6mer
38624-38644
0.001
0
6mer
20257-20278
0.001
1
Funded by:
We have placed cookies on your device to help make this website and the services we offer better. By using this site, you agree to the use of cookies. Learn more
I accept