LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-132-3p


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Gene
miRNA
Score
DIANA Links
RP11-572M11.4
hsa-miR-132-3p
0.868
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000460707
Biotype: antisense
Gene id: ENSG00000240057
Gene Name: RP11-572M11.4
UCSC graphic:
Expression:
  Cell Line Tissue Category
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
657-676
0.042
1
APTR
hsa-miR-132-3p
0.868
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000447009
Biotype: lincRNA
Gene id: ENSG00000214293
Gene Name: APTR
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
735-750
0.034
0
6mer
447-469
0.004
1
6mer
368-391
0.004
1
RP11-299D14.2
hsa-miR-132-3p
0.867
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000520386
Biotype: lincRNA
Gene id: ENSG00000254178
Gene Name: RP11-299D14.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
362-382
0.041
1
AC026904.1
hsa-miR-132-3p
0.866
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000430626
Biotype: lincRNA
Gene id: ENSG00000233858
Gene Name: AC026904.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Breast Normal/Primary
- Heart Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
3165-3178
0.037
1
6mer
3296-3321
0.004
1
RP11-1024P17.1
hsa-miR-132-3p
0.863
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000561507
Biotype: sense_overlapping
Gene id: ENSG00000261468
Gene Name: RP11-1024P17.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
HUVEC Blood Vessel Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
139-165
0.038
0
6mer
1052-1076
0.003
1
RP13-143G15.3
hsa-miR-132-3p
0.862
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000419926
Biotype: antisense
Gene id: ENSG00000227844
Gene Name: RP13-143G15.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
918-940
0.027
1
6mer
360-372
0.006
1
6mer
1103-1121
0.004
2
6mer
1058-1062
0.004
3
RP11-379I19.3
hsa-miR-132-3p
0.861
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000521274
Biotype: lincRNA
Gene id: ENSG00000253879
Gene Name: RP11-379I19.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
324-341
0.033
6
7mer
112-138
0.007
0
AC079779.7
hsa-miR-132-3p
0.860
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000437798
Biotype: antisense
Gene id: ENSG00000227061
Gene Name: AC079779.7
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
4058-4073
0.040
1
XLOC_010028
hsa-miR-132-3p
0.860
mTTBlnEmP

Gene Details
Chromosome: chr12
Transcript: TCONS_00020729
Biotype: transcript isomorph
Gene id: XLOC_010028
Gene Name: XLOC_010028
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
272-293
0.033
0
6mer
219-242
0.007
2
LY86-AS1
hsa-miR-132-3p
0.859
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000606044
Biotype: antisense
Gene id: ENSG00000216863
Gene Name: LY86-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
LCLBACD3 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
171-186
0.040
0
XLOC_013792
hsa-miR-132-3p
0.858
mTTBlnEmP

Gene Details
Chromosome: chr20
Transcript: TCONS_00028441
Biotype: transcript isomorph
Gene id: XLOC_013792
Gene Name: XLOC_013792
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
273-299
0.040
1
RP4-773N10.4
hsa-miR-132-3p
0.857
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000554749
Biotype: antisense
Gene id: ENSG00000258634
Gene Name: RP4-773N10.4
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
4080-4101
0.031
1
7mer
3333-3356
0.005
1
6mer
2870-2884
0.002
2
6mer
3344-3368
0.002
2
RP4-555D20.2
hsa-miR-132-3p
0.857
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000568686
Biotype: lincRNA
Gene id: ENSG00000261786
Gene Name: RP4-555D20.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
LCLBACD2 - Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
4899-4925
0.030
0
7mer
4343-4364
0.006
1
6mer
4237-4252
0.002
1
6mer
3028-3036
0.002
0
6mer
762-782
0.001
Not Conserved
RP11-424M24.5
hsa-miR-132-3p
0.857
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000574178
Biotype: lincRNA
Gene id: ENSG00000262890
Gene Name: RP11-424M24.5
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
52-68
0.040
Not Conserved
MIR17HG
hsa-miR-132-3p
0.857
mTTBlnEmP

Gene Details
Chromosome: 13
Transcript: ENST00000581816
Biotype: lincRNA
Gene id: ENSG00000215417
Gene Name: MIR17HG
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1826-1850
0.022
3
7mer
1377-1390
0.010
2
6mer
822-839
0.004
9
6mer
1113-1133
0.003
7
6mer
1100-1121
0.002
2
ZBTB20-AS1
hsa-miR-132-3p
0.857
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000467304
Biotype: antisense
Gene id: ENSG00000241560
Gene Name: ZBTB20-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
359-385
0.021
1
8mer
142-163
0.019
0
LINC01251
hsa-miR-132-3p
0.856
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000444956
Biotype: antisense
Gene id: ENSG00000233776
Gene Name: LINC01251
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
264-278
0.040
1
AC092192.1
hsa-miR-132-3p
0.855
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000588418
Biotype: lincRNA
Gene id: ENSG00000267290
Gene Name: AC092192.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
242-269
0.040
0
MIAT
hsa-miR-132-3p
0.854
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000418918
Biotype: lincRNA
Gene id: ENSG00000225783
Gene Name: MIAT
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
GM12878 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
A549 Lung Cancer/Malignant
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
20-43
0.040
1
PTPRG-AS1
hsa-miR-132-3p
0.852
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000498655
Biotype: antisense
Gene id: ENSG00000241472
Gene Name: PTPRG-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
183-201
0.039
1
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