LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-132-3p


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Gene
miRNA
Score
DIANA Links
ZBTB20-AS1
hsa-miR-132-3p
0.883
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000496219
Biotype: antisense
Gene id: ENSG00000241560
Gene Name: ZBTB20-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
374-400
0.026
1
8mer
217-238
0.018
0
AC046143.3
hsa-miR-132-3p
0.881
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000447139
Biotype: antisense
Gene id: ENSG00000229334
Gene Name: AC046143.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
660-682
0.043
0
RP11-14C22.3
hsa-miR-132-3p
0.881
mTTBlnEmP

Gene Details
Chromosome: 10
Transcript: ENST00000450581
Biotype: lincRNA
Gene id: ENSG00000230998
Gene Name: RP11-14C22.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
347-366
0.043
1
XLOC_005389
hsa-miR-132-3p
0.880
mTTBlnEmP

Gene Details
Chromosome: chr6
Transcript: TCONS_00011890
Biotype: transcript isomorph
Gene id: XLOC_005389
Gene Name: XLOC_005389
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
221-248
0.043
8
AC114776.3
hsa-miR-132-3p
0.880
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000414159
Biotype: lincRNA
Gene id: ENSG00000235881
Gene Name: AC114776.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
3602-3626
0.034
1
7mer
3661-3672
0.009
Not Conserved
RP11-141C7.4
hsa-miR-132-3p
0.879
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000608379
Biotype: lincRNA
Gene id: ENSG00000272792
Gene Name: RP11-141C7.4
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
408-433
0.043
0
AC027763.2
hsa-miR-132-3p
0.879
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000399540
Biotype: antisense
Gene id: ENSG00000215067
Gene Name: AC027763.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
136-160
0.031
0
7mer
1061-1071
0.007
1
6mer
1169-1181
0.003
1
6mer
1017-1028
0.002
1
SMC2-AS1
hsa-miR-132-3p
0.878
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000603487
Biotype: lincRNA
Gene id: ENSG00000270332
Gene Name: SMC2-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
- Brain Normal/Primary
- Breast Normal/Primary
HeLa Cervix Cancer/Malignant
- Colon Normal/Primary
- Heart Normal/Primary
HepG2 Liver Cancer/Malignant
Fibroblasts Lung Normal/Primary
- Lung Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
6927-6953
0.036
1
6mer
6856-6880
0.004
1
6mer
3679-3692
0.002
1
6mer
3923-3938
0.001
0
LOC286367
hsa-miR-132-3p
0.876
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: NR_024011.1
Biotype: sense
Gene id: NR_024011.1 (gene)
Gene Name: LOC286367
UCSC graphic: -
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
173-185
0.028
Not Conserved
7mer
2578-2604
0.005
0
7mer
2564-2585
0.005
0
6mer
2340-2358
0.003
1
6mer
1782-1797
0.002
1
MIAT
hsa-miR-132-3p
0.875
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000421867
Biotype: lincRNA
Gene id: ENSG00000225783
Gene Name: MIAT
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
GM12878 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
A549 Lung Cancer/Malignant
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
232-255
0.032
1
8mer+wobble
123-148
0.011
0
RP11-474P2.6
hsa-miR-132-3p
0.873
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000621248
Biotype: lincRNA
Gene id: ENSG00000275481
Gene Name: RP11-474P2.6
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2643-2664
0.020
1
7mer
413-440
0.008
0
6mer
3158-3175
0.005
Not Conserved
6mer
279-302
0.003
1
8mer
1614-1632
0.003
1
6mer
519-537
0.002
1
6mer
1531-1554
0.001
0
PCBP1-AS1
hsa-miR-132-3p
0.872
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000452431
Biotype: antisense
Gene id: ENSG00000179818
Gene Name: PCBP1-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD3 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
462-486
0.042
7
XLOC_000199
hsa-miR-132-3p
0.871
mTTBlnEmP

Gene Details
Chromosome: chr1
Transcript: TCONS_00000200
Biotype: transcript isomorph
Gene id: XLOC_000199
Gene Name: XLOC_000199
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Liver Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1472-1488
0.017
0
6mer
821-831
0.013
1
6mer
138-159
0.012
1
XLOC_013649
hsa-miR-132-3p
0.871
mTTBlnEmP

Gene Details
Chromosome: chr20
Transcript: TCONS_00028615
Biotype: transcript isomorph
Gene id: XLOC_013649
Gene Name: XLOC_013649
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
426-443
0.024
1
6mer
24-45
0.007
1
6mer
98-119
0.006
3
6mer
10-32
0.005
0
RP11-142O6.1
hsa-miR-132-3p
0.870
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000584382
Biotype: sense_intronic
Gene id: ENSG00000266371
Gene Name: RP11-142O6.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
353-373
0.017
1
6mer
366-381
0.011
1
6mer
154-172
0.007
0
6mer
2180-2197
0.004
0
6mer
851-871
0.003
0
RP13-143G15.3
hsa-miR-132-3p
0.870
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000413745
Biotype: antisense
Gene id: ENSG00000227844
Gene Name: RP13-143G15.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
306-328
0.037
1
6mer
446-450
0.005
3
NUP50-AS1
hsa-miR-132-3p
0.869
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000609284
Biotype: lincRNA
Gene id: ENSG00000226328
Gene Name: NUP50-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
96-111
0.042
0
SNHG14
hsa-miR-132-3p
0.869
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000549804
Biotype: antisense
Gene id: ENSG00000224078
Gene Name: SNHG14
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
6391-6411
0.012
1
7mer
4628-4643
0.012
6
7mer
6169-6174
0.010
3
7mer
178-200
0.004
0
6mer
3781-3796
0.002
1
6mer
6266-6287
0.002
2
RP11-480A16.1
hsa-miR-132-3p
0.869
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000570130
Biotype: lincRNA
Gene id: ENSG00000260261
Gene Name: RP11-480A16.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
39-61
0.035
1
6mer
3062-3089
0.004
Not Conserved
6mer
2615-2625
0.003
0
XLOC_006997
hsa-miR-132-3p
0.868
mTTBlnEmP

Gene Details
Chromosome: chr8
Transcript: TCONS_00014926
Biotype: transcript isomorph
Gene id: XLOC_006997
Gene Name: XLOC_006997
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
42-65
0.042
0
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