LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-132-3p


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Gene
miRNA
Score
DIANA Links
RP11-22H5.2
hsa-miR-132-3p
0.920
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000567359
Biotype: sense_intronic
Gene id: ENSG00000260862
Gene Name: RP11-22H5.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
3764-3789
0.046
1
6mer
3755-3774
0.003
0
6mer
1862-1884
0.002
1
RP11-103J17.2
hsa-miR-132-3p
0.920
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000562049
Biotype: lincRNA
Gene id: ENSG00000261761
Gene Name: RP11-103J17.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
- Placenta Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
2284-2309
0.028
4
8mer
1312-1337
0.018
1
6mer
2275-2294
0.005
1
RP11-140I24.1
hsa-miR-132-3p
0.918
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000555721
Biotype: lincRNA
Gene id: ENSG00000258779
Gene Name: RP11-140I24.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
948-970
0.029
9
7mer
816-828
0.017
5
6mer
97-123
0.004
1
XLOC_004699
hsa-miR-132-3p
0.918
mTTBlnEmP

Gene Details
Chromosome: chr5
Transcript: TCONS_00010231
Biotype: transcript isomorph
Gene id: XLOC_004699
Gene Name: XLOC_004699
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
518-538
0.050
1
NEAT1
hsa-miR-132-3p
0.918
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000501122
Biotype: lincRNA
Gene id: ENSG00000245532
Gene Name: NEAT1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
6428-6446
0.020
1
7mer
12602-12625
0.005
1
7mer
13827-13850
0.004
2
7mer
4358-4377
0.003
1
6mer
11401-11418
0.002
1
6mer
20671-20692
0.002
1
6mer
12843-12867
0.002
1
6mer
13625-13651
0.002
1
6mer
20992-21012
0.002
0
6mer
9567-9580
0.002
1
6mer
7827-7852
0.002
0
6mer
3636-3657
0.001
1
6mer
11757-11770
0.001
0
6mer
5799-5812
0.001
Not Conserved
6mer
13476-13497
0.001
Not Conserved
RP11-499F3.2
hsa-miR-132-3p
0.917
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000560097
Biotype: lincRNA
Gene id: ENSG00000259692
Gene Name: RP11-499F3.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
150-171
0.050
0
RP11-360I2.1
hsa-miR-132-3p
0.915
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000606105
Biotype: lincRNA
Gene id: ENSG00000272130
Gene Name: RP11-360I2.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
207-220
0.030
1
7mer
246-266
0.019
1
LOC285819
hsa-miR-132-3p
0.915
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: NR_038992.1
Biotype: antisense
Gene id: NR_038992.1 (gene)
Gene Name: LOC285819
UCSC graphic: -
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
35-56
0.040
1
8mer
1051-1069
0.006
Not Conserved
6mer
2712-2734
0.004
1
RP11-499F3.2
hsa-miR-132-3p
0.914
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000560054
Biotype: lincRNA
Gene id: ENSG00000259692
Gene Name: RP11-499F3.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
150-171
0.049
0
RP11-861E21.2
hsa-miR-132-3p
0.913
mTTBlnEmP

Gene Details
Chromosome: 18
Transcript: ENST00000589795
Biotype: antisense
Gene id: ENSG00000267199
Gene Name: RP11-861E21.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
4795-4805
0.024
5
8mer
2686-2702
0.019
0
7mer
1081-1096
0.006
1
RP11-65M17.3
hsa-miR-132-3p
0.912
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000528496
Biotype: lincRNA
Gene id: ENSG00000254968
Gene Name: RP11-65M17.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
604-625
0.049
1
MIR4458HG
hsa-miR-132-3p
0.909
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000606459
Biotype: lincRNA
Gene id: ENSG00000247516
Gene Name: MIR4458HG
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
- Brain Normal/Primary
- Breast Normal/Primary
HeLa Cervix Cancer/Malignant
- Colon Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
HepG2 Liver Cancer/Malignant
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
- Lymph Node Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
1603-1629
0.048
1
XLOC_011548
hsa-miR-132-3p
0.907
mTTBlnEmP

Gene Details
Chromosome: chr15
Transcript: TCONS_00023756
Biotype: transcript isomorph
Gene id: XLOC_011548
Gene Name: XLOC_011548
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
K562 Blood Cancer/Malignant
- Breast Normal/Primary
- Colon Normal/Primary
- Heart Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
- Lung Normal/Primary
- Lymph Node Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
- Placenta Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
828-849
0.048
0
ITCH-IT1
hsa-miR-132-3p
0.906
mTTBlnEmP

Gene Details
Chromosome: 20
Transcript: ENST00000418598
Biotype: sense_intronic
Gene id: ENSG00000231795
Gene Name: ITCH-IT1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
7-32
0.033
3
7mer
14-38
0.015
Not Conserved
RP3-323A16.1
hsa-miR-132-3p
0.906
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000623959
Biotype: antisense
Gene id: ENSG00000279184
Gene Name: RP3-323A16.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
23506-23512
0.012
3
8mer
1999-2019
0.012
0
8mer
5630-5656
0.007
0
6mer
41808-41812
0.002
0
6mer
44278-44300
0.002
2
6mer
30651-30673
0.002
0
6mer
43042-43068
0.002
1
6mer
42085-42112
0.002
2
6mer
47806-47811
0.002
0
7mer
50211-50236
0.001
1
6mer
44589-44615
0.001
2
6mer
38726-38737
0.001
1
6mer
16829-16855
0.001
1
6mer
14373-14388
0.001
0
6mer
30669-30689
0.001
0
6mer
30679-30699
0.000
0
RP11-334G22.1
hsa-miR-132-3p
0.905
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000608934
Biotype: antisense
Gene id: ENSG00000273063
Gene Name: RP11-334G22.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
HeLa Cervix Cancer/Malignant


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
261-286
0.048
0
RP11-467K18.2
hsa-miR-132-3p
0.905
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000521394
Biotype: antisense
Gene id: ENSG00000253973
Gene Name: RP11-467K18.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
580-607
0.042
1
6mer
292-307
0.006
3
XLOC_006111
hsa-miR-132-3p
0.904
mTTBlnEmP

Gene Details
Chromosome: chr7
Transcript: TCONS_00013454
Biotype: transcript isomorph
Gene id: XLOC_006111
Gene Name: XLOC_006111
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
626-645
0.047
1
XLOC_010695
hsa-miR-132-3p
0.902
mTTBlnEmP

Gene Details
Chromosome: chr13
Transcript: TCONS_00022087
Biotype: transcript isomorph
Gene id: XLOC_010695
Gene Name: XLOC_010695
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary
Fibroblasts Lung Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1154-1181
0.047
14
RP11-331K15.1
hsa-miR-132-3p
0.899
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000460586
Biotype: lincRNA
Gene id: ENSG00000241328
Gene Name: RP11-331K15.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
44-66
0.029
1
7mer
363-386
0.014
0
6mer
453-471
0.003
2
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