LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-132-3p


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Gene
miRNA
Score
DIANA Links
XLOC_007796
hsa-miR-132-3p
0.937
mTTBlnEmP

Gene Details
Chromosome: chr9
Transcript: TCONS_00016430
Biotype: transcript isomorph
Gene id: XLOC_007796
Gene Name: XLOC_007796
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
697-723
0.039
0
8mer
277-298
0.016
0
YEATS2-AS1
hsa-miR-132-3p
0.937
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000425008
Biotype: antisense
Gene id: ENSG00000233885
Gene Name: YEATS2-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
3-23
0.026
1
7mer
2393-2413
0.016
1
7mer
2146-2165
0.006
1
6mer
2004-2025
0.004
3
6mer
467-490
0.002
0
RP11-79H23.3
hsa-miR-132-3p
0.936
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000565297
Biotype: lincRNA
Gene id: ENSG00000261618
Gene Name: RP11-79H23.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2594-2616
0.033
2
7mer
493-517
0.008
1
6mer
242-261
0.005
1
6mer
2666-2683
0.004
1
6mer
992-1002
0.002
1
6mer
735-754
0.002
0
RP11-140I24.1
hsa-miR-132-3p
0.935
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000562661
Biotype: lincRNA
Gene id: ENSG00000258779
Gene Name: RP11-140I24.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
562-584
0.035
9
7mer
430-442
0.019
5
RP11-260E18.1
hsa-miR-132-3p
0.934
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000499131
Biotype: antisense
Gene id: ENSG00000246214
Gene Name: RP11-260E18.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1513-1529
0.027
1
8mer
947-972
0.019
1
6mer
1384-1409
0.005
1
6mer
1449-1474
0.003
0
AC023115.2
hsa-miR-132-3p
0.933
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000618608
Biotype: lincRNA
Gene id: ENSG00000235885
Gene Name: AC023115.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
SK-N-SH Brain Cancer/Malignant
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
472-496
0.054
4
RP11-26J3.3
hsa-miR-132-3p
0.932
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000606512
Biotype: sense_intronic
Gene id: ENSG00000272518
Gene Name: RP11-26J3.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HeLa Cervix Cancer/Malignant
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD2 - Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
597-611
0.047
2
6mer
440-461
0.007
2
AC023115.2
hsa-miR-132-3p
0.931
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000450294
Biotype: lincRNA
Gene id: ENSG00000235885
Gene Name: AC023115.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
SK-N-SH Brain Cancer/Malignant
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
225-249
0.044
4
6mer
140-149
0.010
7
CTD-2588E21.1
hsa-miR-132-3p
0.931
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000614633
Biotype: lincRNA
Gene id: ENSG00000277763
Gene Name: CTD-2588E21.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
34-58
0.048
5
6mer
213-238
0.006
3
MIR6818
hsa-miR-132-3p
0.931
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000624945
Biotype: antisense
Gene id: ENSG00000279159
Gene Name: MIR6818
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
653-676
0.009
0
8mer
44393-44410
0.008
0
8mer
10884-10899
0.008
1
8mer+wobble
47757-47780
0.003
5
7mer
4583-4603
0.003
0
6mer
17343-17368
0.002
4
6mer
38629-38647
0.002
5
6mer
20109-20125
0.002
2
6mer
32874-32900
0.002
1
6mer
31960-31978
0.002
1
6mer
6199-6216
0.002
1
6mer
18333-18356
0.002
1
6mer
36384-36409
0.002
0
6mer
2368-2384
0.002
0
6mer
38175-38199
0.001
1
6mer
14411-14436
0.001
0
6mer
40487-40505
0.001
0
6mer
22583-22597
0.001
1
XLOC_009033
hsa-miR-132-3p
0.931
mTTBlnEmP

Gene Details
Chromosome: chr11
Transcript: TCONS_00019829
Biotype: transcript isomorph
Gene id: XLOC_009033
Gene Name: XLOC_009033
UCSC graphic: -
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
- Lung Normal/Primary
- Ovary Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
124-131
0.053
0
XLOC_003861
hsa-miR-132-3p
0.928
mTTBlnEmP

Gene Details
Chromosome: chr4
Transcript: TCONS_00007369
Biotype: transcript isomorph
Gene id: XLOC_003861
Gene Name: XLOC_003861
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Prostate Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
156-183
0.053
1
RP3-513G18.2
hsa-miR-132-3p
0.928
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000508619
Biotype: lincRNA
Gene id: ENSG00000250632
Gene Name: RP3-513G18.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
157-184
0.052
1
LOC101926935
hsa-miR-132-3p
0.928
mTTBlnEmP

Gene Details
Chromosome: 20
Transcript: NR_110001.1
Biotype: sense
Gene id: NR_110001.1 (gene)
Gene Name: LOC101926935
UCSC graphic: -
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
4851-4869
0.052
0
RP11-1085N6.3
hsa-miR-132-3p
0.927
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000554597
Biotype: antisense
Gene id: ENSG00000259133
Gene Name: RP11-1085N6.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
155-172
0.052
12
XLOC_002477
hsa-miR-132-3p
0.926
mTTBlnEmP

Gene Details
Chromosome: chr2
Transcript: TCONS_00004570
Biotype: transcript isomorph
Gene id: XLOC_002477
Gene Name: XLOC_002477
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Thyroid Normal/Primary
LCLBACD2 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
334-351
0.052
0
CTD-3162L10.1
hsa-miR-132-3p
0.925
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000586345
Biotype: lincRNA
Gene id: ENSG00000267053
Gene Name: CTD-3162L10.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
SK-N-SH Brain Cancer/Malignant
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
636-658
0.047
0
7mer
262-288
0.004
Not Conserved
XLOC_007354
hsa-miR-132-3p
0.922
mTTBlnEmP

Gene Details
Chromosome: chr9
Transcript: TCONS_00015980
Biotype: transcript isomorph
Gene id: XLOC_007354
Gene Name: XLOC_007354
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary
- Heart Normal/Primary
- Lung Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
858-878
0.047
1
6mer
585-602
0.004
1
FLJ36777
hsa-miR-132-3p
0.921
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000499242
Biotype: lincRNA
Gene id: ENSG00000245468
Gene Name: FLJ36777
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
206-223
0.051
1
LOC101928505
hsa-miR-132-3p
0.921
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: NR_104668.1
Biotype: lincRNA
Gene id: NR_104668.1 (gene)
Gene Name: LOC101928505
UCSC graphic: -
Expression:
  Cell Line Tissue Category
HepG2 Liver Cancer/Malignant


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1623-1649
0.051
1
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