LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-132-3p


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Gene
miRNA
Score
DIANA Links
XLOC_007693
hsa-miR-132-3p
0.958
mTTBlnEmP

Gene Details
Chromosome: chr9
Transcript: TCONS_00015563
Biotype: transcript isomorph
Gene id: XLOC_007693
Gene Name: XLOC_007693
UCSC graphic: -
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
1711-1730
0.016
0
XLOC_013866
hsa-miR-132-3p
0.958
mTTBlnEmP

Gene Details
Chromosome: chr21
Transcript: TCONS_00028969
Biotype: transcript isomorph
Gene id: XLOC_013866
Gene Name: XLOC_013866
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
HeLa Cervix Cancer/Malignant
- Colon Normal/Primary
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
- Heart Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
- Kidney Normal/Primary
- Liver Normal/Primary
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
4396-4414
0.022
1
8mer
2710-2730
0.013
1
8mer
871-893
0.013
0
7mer
2343-2360
0.003
0
6mer
933-954
0.003
4
6mer
542-557
0.002
0
6mer
1172-1184
0.002
1
6mer
2112-2136
0.002
0
6mer
1212-1235
0.001
0
XLOC_010829
hsa-miR-132-3p
0.956
mTTBlnEmP

Gene Details
Chromosome: chr14
Transcript: TCONS_00022504
Biotype: transcript isomorph
Gene id: XLOC_010829
Gene Name: XLOC_010829
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
Fibroblasts Lung Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
3112-3132
0.054
1
6mer
2772-2788
0.007
6
XLOC_003094
hsa-miR-132-3p
0.955
mTTBlnEmP

Gene Details
Chromosome: chr3
Transcript: TCONS_00006492
Biotype: transcript isomorph
Gene id: XLOC_003094
Gene Name: XLOC_003094
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
35-56
0.061
1
LA16c-306A4.1
hsa-miR-132-3p
0.951
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000569106
Biotype: antisense
Gene id: ENSG00000260022
Gene Name: LA16c-306A4.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
474-499
0.040
1
6mer
486-512
0.019
1
CTD-2526M8.2
hsa-miR-132-3p
0.951
mTTBlnEmP

Gene Details
Chromosome: 18
Transcript: ENST00000592678
Biotype: lincRNA
Gene id: ENSG00000267726
Gene Name: CTD-2526M8.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
222-246
0.052
0
6mer
374-401
0.007
1
MBNL1-AS1
hsa-miR-132-3p
0.950
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000608395
Biotype: antisense
Gene id: ENSG00000229619
Gene Name: MBNL1-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
HUVEC Blood Vessel Normal/Primary
HeLa Cervix Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
6311-6337
0.031
5
7mer
329-351
0.013
0
6mer
30-51
0.007
2
6mer
72-89
0.006
2
6mer
679-696
0.002
0
MIR222HG
hsa-miR-132-3p
0.950
mTTBlnEmP

Gene Details
Chromosome: X
Transcript: ENST00000602461
Biotype: lincRNA
Gene id: ENSG00000270069
Gene Name: MIR222HG
UCSC graphic:
Expression:
  Cell Line Tissue Category
hMSC-BM Bone Marrow Stem/Progenitor
HeLa Cervix Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
260-274
0.045
1
7mer
514-531
0.011
1
6mer
441-466
0.003
1
XLOC_011448
hsa-miR-132-3p
0.949
mTTBlnEmP

Gene Details
Chromosome: chr15
Transcript: TCONS_00023648
Biotype: transcript isomorph
Gene id: XLOC_011448
Gene Name: XLOC_011448
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
K562 Blood Cancer/Malignant
- Brain Normal/Primary
- Breast Normal/Primary
HeLa Cervix Cancer/Malignant
- Colon Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
- Kidney Normal/Primary
- Liver Normal/Primary
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
9979-9998
0.021
0
8mer
9055-9071
0.016
1
6mer
439-460
0.005
1
7mer
5419-5439
0.005
0
6mer
9974-9990
0.003
2
6mer
7551-7574
0.003
4
6mer
8830-8854
0.002
1
6mer
6367-6375
0.002
2
6mer
3267-3290
0.002
1
XLOC_014106
hsa-miR-132-3p
0.947
mTTBlnEmP

Gene Details
Chromosome: chr21
Transcript: TCONS_00029162
Biotype: transcript isomorph
Gene id: XLOC_014106
Gene Name: XLOC_014106
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Colon Normal/Primary
- Liver Normal/Primary
- Lung Normal/Primary
- Placenta Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
845-865
0.058
0
CASC7
hsa-miR-132-3p
0.945
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000560295
Biotype: lincRNA
Gene id: ENSG00000259758
Gene Name: CASC7
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
836-852
0.030
4
7mer
8974-9001
0.012
5
7mer
1634-1656
0.004
4
6mer
2667-2687
0.002
5
6mer
8369-8387
0.002
1
6mer
8192-8215
0.002
0
6mer
6964-6991
0.002
1
6mer
3975-3996
0.002
1
6mer
7367-7393
0.001
1
RP11-80F22.4
hsa-miR-132-3p
0.944
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000567902
Biotype: lincRNA
Gene id: ENSG00000261445
Gene Name: RP11-80F22.4
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
54-75
0.048
1
6mer
95-120
0.008
0
LINC01515
hsa-miR-132-3p
0.943
mTTBlnEmP

Gene Details
Chromosome: 10
Transcript: ENST00000601926
Biotype: lincRNA
Gene id: ENSG00000228065
Gene Name: LINC01515
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
174-190
0.043
0
7mer
297-317
0.014
1
APTR
hsa-miR-132-3p
0.943
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000440088
Biotype: lincRNA
Gene id: ENSG00000214293
Gene Name: APTR
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1850-1865
0.032
0
7mer
119-141
0.022
2
6mer
1289-1307
0.002
0
CTA-941F9.10
hsa-miR-132-3p
0.943
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000623075
Biotype: sense_overlapping
Gene id: ENSG00000280383
Gene Name: CTA-941F9.10
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2650-2664
0.014
0
8mer
6708-6731
0.012
1
7mer
2438-2457
0.007
Not Conserved
6mer
559-563
0.003
Not Conserved
6mer
9626-9647
0.003
4
6mer
810-832
0.002
0
6mer
10719-10742
0.002
2
6mer
9063-9087
0.002
2
6mer
21311-21337
0.002
1
6mer
5417-5440
0.002
0
6mer
13222-13236
0.002
1
6mer
14626-14640
0.001
1
6mer
3809-3827
0.001
0
6mer
17016-17042
0.001
1
6mer
7469-7489
0.001
Not Conserved
6mer
9162-9179
0.001
0
6mer
10786-10804
0.001
3
AC113618.1
hsa-miR-132-3p
0.942
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000448543
Biotype: lincRNA
Gene id: ENSG00000234279
Gene Name: AC113618.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
409-431
0.056
1
RP11-391H12.8
hsa-miR-132-3p
0.941
mTTBlnEmP

Gene Details
Chromosome: 13
Transcript: ENST00000621449
Biotype: sense_intronic
Gene id: ENSG00000276434
Gene Name: RP11-391H12.8
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
123-138
0.056
1
RP11-362K14.5
hsa-miR-132-3p
0.941
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000602342
Biotype: antisense
Gene id: ENSG00000269984
Gene Name: RP11-362K14.5
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
332-359
0.037
0
7mer
2499-2517
0.010
1
6mer
2633-2649
0.006
7
6mer
1896-1915
0.002
4
LINC00847
hsa-miR-132-3p
0.940
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000509921
Biotype: lincRNA
Gene id: ENSG00000245060
Gene Name: LINC00847
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD2 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
794-817
0.053
0
6mer
759-783
0.003
0
RP11-105N14.3
hsa-miR-132-3p
0.938
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000426870
Biotype: lincRNA
Gene id: ENSG00000236193
Gene Name: RP11-105N14.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
336-354
0.055
1
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