LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-132-3p


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Gene
miRNA
Score
DIANA Links
RP11-744K17.1
hsa-miR-132-3p
0.982
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000562182
Biotype: lincRNA
Gene id: ENSG00000261020
Gene Name: RP11-744K17.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
3077-3099
0.061
1
7mer
1678-1701
0.007
0
6mer
962-984
0.004
1
6mer
1077-1097
0.004
1
RP11-757G1.6
hsa-miR-132-3p
0.981
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000512200
Biotype: lincRNA
Gene id: ENSG00000250508
Gene Name: RP11-757G1.6
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
HUVEC Blood Vessel Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
2936-2954
0.048
0
6mer
3120-3137
0.015
0
6mer
478-500
0.012
0
CTB-89H12.4
hsa-miR-132-3p
0.979
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000499521
Biotype: retained_intron
Gene id: ENSG00000230551
Gene Name: CTB-89H12.4
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
8556-8577
0.015
5
8mer
4828-4849
0.012
2
6mer
80-99
0.009
9
6mer
311-331
0.006
6
6mer
460-482
0.006
8
6mer
8543-8568
0.005
4
6mer
348-368
0.004
1
6mer
1679-1683
0.003
8
6mer
299-321
0.003
Not Conserved
7mer
5071-5097
0.003
1
6mer
8240-8256
0.003
1
6mer
5896-5910
0.002
1
6mer
6614-6633
0.002
0
6mer
7005-7025
0.001
1
MUC19
hsa-miR-132-3p
0.976
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000454784
Biotype: processed_transcript
Gene id: ENSG00000205592
Gene Name: MUC19
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
- Testes Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
24384-24409
0.053
4
8mer
3435-3455
0.006
0
7mer
7435-7461
0.002
0
6mer
4152-4165
0.002
3
6mer
8338-8362
0.001
1
6mer
19826-19840
0.001
3
6mer
17639-17665
0.001
Not Conserved
6mer
22928-22948
0.001
1
6mer
20186-20200
0.001
2
6mer
4224-4237
0.001
4
6mer
8997-9016
0.001
0
6mer
23031-23050
0.001
2
6mer
22948-22966
0.000
1
RP11-576I22.2
hsa-miR-132-3p
0.976
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000416416
Biotype: antisense
Gene id: ENSG00000231407
Gene Name: RP11-576I22.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
522-535
0.032
2
8mer
79-105
0.028
5
6mer
300-308
0.011
10
INAFM2
hsa-miR-132-3p
0.975
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000560415
Biotype: antisense
Gene id: ENSG00000259330
Gene Name: INAFM2
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
31-47
0.045
4
7mer
325-346
0.026
8
RP11-500G10.5
hsa-miR-132-3p
0.974
mTTBlnEmP

Gene Details
Chromosome: 10
Transcript: ENST00000612008
Biotype: lincRNA
Gene id: ENSG00000277218
Gene Name: RP11-500G10.5
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
144-169
0.070
3
XLOC_010769
hsa-miR-132-3p
0.973
mTTBlnEmP

Gene Details
Chromosome: chr14
Transcript: TCONS_00022430
Biotype: transcript isomorph
Gene id: XLOC_010769
Gene Name: XLOC_010769
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Colon Normal/Primary
- Liver Normal/Primary
- Ovary Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
146-164
0.022
0
7mer
2492-2510
0.020
0
6mer
1013-1038
0.007
1
6mer
42-68
0.007
0
6mer
2389-2415
0.007
0
6mer
504-527
0.005
0
RP11-475A13.1
hsa-miR-132-3p
0.973
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000558963
Biotype: lincRNA
Gene id: ENSG00000259737
Gene Name: RP11-475A13.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
9-36
0.055
4
8mer
2267-2291
0.011
2
6mer
1235-1253
0.003
4
RP11-248N22.1
hsa-miR-132-3p
0.972
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000511346
Biotype: lincRNA
Gene id: ENSG00000250957
Gene Name: RP11-248N22.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
5-23
0.069
1
RP11-153K11.3
hsa-miR-132-3p
0.970
mTTBlnEmP

Gene Details
Chromosome: 10
Transcript: ENST00000444086
Biotype: lincRNA
Gene id: ENSG00000233590
Gene Name: RP11-153K11.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Colon Normal/Primary
- Kidney Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
298-323
0.068
4
HP09025
hsa-miR-132-3p
0.969
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000592718
Biotype: lincRNA
Gene id: ENSG00000267719
Gene Name: HP09025
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
3957-3978
0.067
1
RP11-153K11.3
hsa-miR-132-3p
0.965
mTTBlnEmP

Gene Details
Chromosome: 10
Transcript: ENST00000429634
Biotype: lincRNA
Gene id: ENSG00000233590
Gene Name: RP11-153K11.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Colon Normal/Primary
- Kidney Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
296-321
0.065
4
KCNIP4-IT1
hsa-miR-132-3p
0.964
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: NR_002813.1
Biotype: sense
Gene id: NR_002813.1 (gene)
Gene Name: KCNIP4-IT1
UCSC graphic: -
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
9093-9113
0.018
0
8mer
2588-2613
0.017
0
7mer
9669-9683
0.011
2
7mer
9452-9476
0.008
0
6mer
899-903
0.004
1
6mer
9523-9540
0.004
0
6mer
598-620
0.002
0
6mer
3819-3844
0.001
2
XLOC_002476
hsa-miR-132-3p
0.963
mTTBlnEmP

Gene Details
Chromosome: chr2
Transcript: TCONS_00003490
Biotype: transcript isomorph
Gene id: XLOC_002476
Gene Name: XLOC_002476
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
336-354
0.064
1
XLOC_009066
hsa-miR-132-3p
0.963
mTTBlnEmP

Gene Details
Chromosome: chr11
Transcript: TCONS_00019236
Biotype: transcript isomorph
Gene id: XLOC_009066
Gene Name: XLOC_009066
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
855-878
0.059
0
6mer
467-493
0.005
1
MUC19
hsa-miR-132-3p
0.962
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000427572
Biotype: processed_transcript
Gene id: ENSG00000205592
Gene Name: MUC19
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
- Testes Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
164-189
0.063
4
RP11-44F14.8
hsa-miR-132-3p
0.961
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000571340
Biotype: lincRNA
Gene id: ENSG00000262714
Gene Name: RP11-44F14.8
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1442-1461
0.027
0
7mer
472-488
0.027
1
6mer
553-577
0.010
1
MUC19
hsa-miR-132-3p
0.959
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000546043
Biotype: retained_intron
Gene id: ENSG00000205592
Gene Name: MUC19
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
- Testes Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
87-112
0.062
4
XXyac-YX155B6.7
hsa-miR-132-3p
0.959
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000610161
Biotype: lincRNA
Gene id: ENSG00000273059
Gene Name: XXyac-YX155B6.7
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
407-426
0.059
0
6mer
35-52
0.003
Not Conserved
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