LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-132-3p


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Gene
miRNA
Score
DIANA Links
RP13-39P12.3
hsa-miR-132-3p
0.838
mTTBlnEmP

Gene Details
Chromosome: 10
Transcript: ENST00000601701
Biotype: antisense
Gene id: ENSG00000228748
Gene Name: RP13-39P12.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
764-790
0.038
1
RP11-386M24.6
hsa-miR-132-3p
0.837
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000620192
Biotype: antisense
Gene id: ENSG00000260337
Gene Name: RP11-386M24.6
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
87-103
0.025
1
6mer
430-444
0.005
3
6mer
3432-3450
0.002
0
6mer
2134-2159
0.002
2
6mer
1789-1810
0.002
0
6mer
1184-1203
0.001
0
ZNRD1-AS1
hsa-miR-132-3p
0.836
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000444051
Biotype: antisense
Gene id: ENSG00000204623
Gene Name: ZNRD1-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
9639-9659
0.026
1
6mer
8989-9006
0.006
1
6mer
8052-8074
0.002
1
6mer
1901-1920
0.002
0
AC002519.8
hsa-miR-132-3p
0.834
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000570073
Biotype: sense_intronic
Gene id: ENSG00000259810
Gene Name: AC002519.8
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
184-200
0.021
0
6mer
3-29
0.009
0
6mer
2212-2235
0.008
0
XLOC_010106
hsa-miR-132-3p
0.833
mTTBlnEmP

Gene Details
Chromosome: chr12
Transcript: TCONS_00020820
Biotype: transcript isomorph
Gene id: XLOC_010106
Gene Name: XLOC_010106
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
820-845
0.016
0
7mer
306-325
0.012
1
8mer
742-762
0.005
0
6mer
1449-1465
0.002
1
6mer
1682-1707
0.002
0
CTB-58E17.9
hsa-miR-132-3p
0.832
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000620144
Biotype: antisense
Gene id: ENSG00000275665
Gene Name: CTB-58E17.9
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
395-418
0.037
2
LINC00643
hsa-miR-132-3p
0.832
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000555934
Biotype: lincRNA
Gene id: ENSG00000186369
Gene Name: LINC00643
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1037-1054
0.019
4
6mer
1080-1092
0.010
8
6mer
838-847
0.008
7
LINC01364
hsa-miR-132-3p
0.831
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000452509
Biotype: lincRNA
Gene id: ENSG00000227290
Gene Name: LINC01364
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
818-838
0.037
1
CTA-796E4.5
hsa-miR-132-3p
0.831
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000624243
Biotype: lincRNA
Gene id: ENSG00000280065
Gene Name: CTA-796E4.5
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
17871-17890
0.008
0
7mer
15578-15599
0.005
0
7mer
15196-15220
0.004
1
7mer
29508-29526
0.003
0
6mer
12116-12137
0.002
1
6mer
2662-2679
0.002
1
6mer
10414-10431
0.002
2
6mer
28476-28497
0.002
Not Conserved
6mer
1925-1941
0.002
1
7mer
2966-2979
0.002
0
6mer
19963-19980
0.002
1
6mer
18312-18336
0.001
1
6mer
6942-6958
0.001
2
6mer
5048-5063
0.001
1
6mer
5218-5241
0.001
2
6mer
4925-4949
0.001
0
XLOC_009793
hsa-miR-132-3p
0.831
mTTBlnEmP

Gene Details
Chromosome: chr12
Transcript: TCONS_00020462
Biotype: transcript isomorph
Gene id: XLOC_009793
Gene Name: XLOC_009793
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Heart Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1947-1959
0.030
4
6mer
2103-2114
0.005
1
6mer
1070-1086
0.002
2
RP11-562L8.1
hsa-miR-132-3p
0.830
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000551040
Biotype: antisense
Gene id: ENSG00000257522
Gene Name: RP11-562L8.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
920-943
0.018
1
7mer
394-414
0.013
0
6mer
596-619
0.006
4
XLOC_003730
hsa-miR-132-3p
0.829
mTTBlnEmP

Gene Details
Chromosome: chr4
Transcript: TCONS_00008287
Biotype: transcript isomorph
Gene id: XLOC_003730
Gene Name: XLOC_003730
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary
- Breast Normal/Primary
- Heart Normal/Primary
- Lung Normal/Primary
- Ovary Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
305-332
0.025
1
6mer
671-697
0.012
2
RP11-545I5.3
hsa-miR-132-3p
0.829
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: NR_038246.1
Biotype: antisense
Gene id: NR_038246.1 (gene)
Gene Name: RP11-545I5.3
UCSC graphic: -
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
668-688
0.016
Not Conserved
7mer
594-599
0.011
0
6mer
3304-3311
0.005
0
6mer
2960-2979
0.003
0
6mer
2032-2048
0.002
4
RP11-23E19.1
hsa-miR-132-3p
0.829
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000568931
Biotype: antisense
Gene id: ENSG00000259833
Gene Name: RP11-23E19.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
564-577
0.036
0
RP11-44N22.3
hsa-miR-132-3p
0.828
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000610134
Biotype: retained_intron
Gene id: ENSG00000272702
Gene Name: RP11-44N22.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
2711-2737
0.035
3
6mer
1199-1223
0.001
0
RP1-90G24.8
hsa-miR-132-3p
0.828
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000426354
Biotype: lincRNA
Gene id: ENSG00000230120
Gene Name: RP1-90G24.8
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
489-494
0.029
0
6mer
217-240
0.005
Not Conserved
6mer
250-276
0.003
Not Conserved
NFIA-AS2
hsa-miR-132-3p
0.827
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000418662
Biotype: antisense
Gene id: ENSG00000237928
Gene Name: NFIA-AS2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
18-40
0.036
0
XLOC_009701
hsa-miR-132-3p
0.827
mTTBlnEmP

Gene Details
Chromosome: chr12
Transcript: TCONS_00020231
Biotype: transcript isomorph
Gene id: XLOC_009701
Gene Name: XLOC_009701
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary
- Ovary Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1354-1379
0.013
1
6mer
1155-1181
0.006
2
6mer
1451-1469
0.006
1
6mer
1484-1507
0.006
1
6mer
1474-1495
0.005
1
MEF2C-AS1
hsa-miR-132-3p
0.826
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000508521
Biotype: antisense
Gene id: ENSG00000248309
Gene Name: MEF2C-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
LCLBACD1 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
309-324
0.036
0
CTD-3234P18.6
hsa-miR-132-3p
0.826
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000611182
Biotype: lincRNA
Gene id: ENSG00000276071
Gene Name: CTD-3234P18.6
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1174-1193
0.036
0
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