LncBase Predicted v.2
Help
Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
Bulk download:
We have updated the bulk download module, which simplifies the download process! Please find the new online form by following this link
Deprecated!
This version is deprecated. Users are strongly advised to only use the latest, up-to-date versions of DIANA-Tools and Databases.
Please follow this link to navigate to the latest database version.

hsa-miR-1294


or   Search by location
Loading... Please wait, this might take a few seconds...



Go to Experimental module
Filters

Gene
miRNA
Score
DIANA Links
RP11-326C3.13
hsa-miR-1294
0.924
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000602949
Biotype: lincRNA
Gene id: ENSG00000270030
Gene Name: RP11-326C3.13
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HepG2 Liver Cancer/Malignant
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-1294
Sequence: ugugagguuggcauuguugucu
MirBase ID: MIMAT0005884
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
468-480
0.051
1
STARD13-AS
hsa-miR-1294
0.924
mTTBlnEmP

Gene Details
Chromosome: 13
Transcript: ENST00000610879
Biotype: antisense
Gene id: ENSG00000236581
Gene Name: STARD13-AS
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-1294
Sequence: ugugagguuggcauuguugucu
MirBase ID: MIMAT0005884
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
223-242
0.051
1
MEG3
hsa-miR-1294
0.923
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: NR_046472.1
Biotype: lincRNA
Gene id: NR_046472.1 (gene)
Gene Name: MEG3
UCSC graphic: -
Expression:
  Cell Line Tissue Category
HUVEC Blood Vessel Normal/Primary
IMR90 Lung Embryonic/Fetal/Stem/Progenitor


miRNA Details
Name: hsa-miR-1294
Sequence: ugugagguuggcauuguugucu
MirBase ID: MIMAT0005884
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1528-1551
0.041
5
7mer
193-218
0.006
0
6mer
83-106
0.004
1
MEG3
hsa-miR-1294
0.923
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: NR_046469.1
Biotype: lincRNA
Gene id: NR_046469.1 (gene)
Gene Name: MEG3
UCSC graphic: -
Expression:
  Cell Line Tissue Category
HUVEC Blood Vessel Normal/Primary
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor


miRNA Details
Name: hsa-miR-1294
Sequence: ugugagguuggcauuguugucu
MirBase ID: MIMAT0005884
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1504-1527
0.041
5
7mer
193-218
0.006
0
6mer
83-106
0.004
1
F10-AS1
hsa-miR-1294
0.923
mTTBlnEmP

Gene Details
Chromosome: 13
Transcript: ENST00000424635
Biotype: antisense
Gene id: ENSG00000231882
Gene Name: F10-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-1294
Sequence: ugugagguuggcauuguugucu
MirBase ID: MIMAT0005884
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
30-57
0.051
0
XLOC_013265
hsa-miR-1294
0.922
mTTBlnEmP

Gene Details
Chromosome: chr19
Transcript: TCONS_00027227
Biotype: transcript isomorph
Gene id: XLOC_013265
Gene Name: XLOC_013265
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-1294
Sequence: ugugagguuggcauuguugucu
MirBase ID: MIMAT0005884
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
950-963
0.042
0
6mer
829-852
0.009
0
AC133785.1
hsa-miR-1294
0.922
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000446213
Biotype: antisense
Gene id: ENSG00000233221
Gene Name: AC133785.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-1294
Sequence: ugugagguuggcauuguugucu
MirBase ID: MIMAT0005884
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
16-39
0.044
1
7mer
323-334
0.005
1
6mer
677-702
0.001
1
LINC00174
hsa-miR-1294
0.920
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: NR_026873.1
Biotype: antisense
Gene id: NR_026873.1 (gene)
Gene Name: LINC00174
UCSC graphic: -
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-1294
Sequence: ugugagguuggcauuguugucu
MirBase ID: MIMAT0005884
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
3948-3971
0.020
0
7mer
2011-2030
0.006
1
7mer
2757-2776
0.005
0
6mer
3703-3724
0.004
1
7mer
3218-3241
0.004
0
6mer
654-670
0.002
Not Conserved
7mer
1880-1899
0.002
0
6mer
644-653
0.002
Not Conserved
6mer
538-552
0.002
0
6mer
1289-1308
0.001
Not Conserved
6mer
1754-1774
0.001
1
6mer
1125-1139
0.001
0
6mer
1089-1112
0.000
Not Conserved
RP11-14J7.6
hsa-miR-1294
0.920
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000554006
Biotype: antisense
Gene id: ENSG00000258573
Gene Name: RP11-14J7.6
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-1294
Sequence: ugugagguuggcauuguugucu
MirBase ID: MIMAT0005884
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
432-456
0.040
1
6mer
556-579
0.005
1
6mer
348-367
0.003
1
6mer
75-99
0.003
1
RP11-436D23.1
hsa-miR-1294
0.920
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000607823
Biotype: lincRNA
Gene id: ENSG00000271860
Gene Name: RP11-436D23.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-1294
Sequence: ugugagguuggcauuguugucu
MirBase ID: MIMAT0005884
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1671-1694
0.051
0
RP11-34P13.14
hsa-miR-1294
0.919
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000493797
Biotype: antisense
Gene id: ENSG00000239906
Gene Name: RP11-34P13.14
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
GM12878 Blood Cancer/Malignant
- Brain Normal/Primary
SK-N-SH Brain Cancer/Malignant
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-1294
Sequence: ugugagguuggcauuguugucu
MirBase ID: MIMAT0005884
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
246-270
0.050
1
STARD13-AS
hsa-miR-1294
0.919
mTTBlnEmP

Gene Details
Chromosome: 13
Transcript: ENST00000608496
Biotype: antisense
Gene id: ENSG00000236581
Gene Name: STARD13-AS
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-1294
Sequence: ugugagguuggcauuguugucu
MirBase ID: MIMAT0005884
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
248-267
0.050
1
LL22NC03-86G7.1
hsa-miR-1294
0.919
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000458178
Biotype: antisense
Gene id: ENSG00000224086
Gene Name: LL22NC03-86G7.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant


miRNA Details
Name: hsa-miR-1294
Sequence: ugugagguuggcauuguugucu
MirBase ID: MIMAT0005884
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
20315-20326
0.004
1
7mer
32067-32090
0.004
0
7mer
17587-17602
0.003
4
7mer
24947-24963
0.002
1
6mer
10575-10591
0.002
2
7mer
28571-28591
0.002
3
6mer
36834-36857
0.002
1
6mer
8321-8340
0.002
0
6mer
11932-11955
0.002
3
6mer
35003-35024
0.002
0
7mer
27294-27310
0.002
0
6mer
9653-9674
0.002
0
6mer
5120-5144
0.002
1
6mer
3732-3754
0.002
1
6mer
28043-28066
0.001
2
6mer
7275-7300
0.001
1
6mer
4291-4315
0.001
1
6mer
33203-33225
0.001
3
6mer
29484-29504
0.001
0
6mer
18250-18272
0.001
0
6mer
15393-15411
0.001
1
6mer
29865-29880
0.001
0
6mer
12306-12318
0.001
2
6mer
33954-33968
0.001
1
6mer
13002-13010
0.001
1
6mer
25262-25288
0.001
1
7mer
7324-7341
0.001
0
7mer
1054-1080
0.001
Not Conserved
6mer
13664-13691
0.001
2
6mer
17721-17737
0.001
2
6mer
12432-12452
0.001
1
6mer
32686-32705
0.001
1
6mer
28188-28214
0.001
1
6mer
7986-8011
0.001
1
6mer
12017-12042
0.001
1
DIAPH3-AS1
hsa-miR-1294
0.918
mTTBlnEmP

Gene Details
Chromosome: 13
Transcript: ENST00000432995
Biotype: antisense
Gene id: ENSG00000227528
Gene Name: DIAPH3-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-1294
Sequence: ugugagguuggcauuguugucu
MirBase ID: MIMAT0005884
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
56-80
0.050
5
XLOC_003837
hsa-miR-1294
0.917
mTTBlnEmP

Gene Details
Chromosome: chr4
Transcript: TCONS_00008980
Biotype: transcript isomorph
Gene id: XLOC_003837
Gene Name: XLOC_003837
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-1294
Sequence: ugugagguuggcauuguugucu
MirBase ID: MIMAT0005884
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
66-90
0.010
0
8mer
214-234
0.007
0
8mer
109-129
0.007
0
8mer
235-255
0.006
0
8mer
193-213
0.006
0
8mer
172-192
0.006
0
8mer
151-171
0.003
Not Conserved
8mer
130-150
0.003
Not Conserved
7mer
91-108
0.003
Not Conserved
MIR4534
hsa-miR-1294
0.916
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000623111
Biotype: sense_overlapping
Gene id: ENSG00000279010
Gene Name: MIR4534
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-1294
Sequence: ugugagguuggcauuguugucu
MirBase ID: MIMAT0005884
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
46587-46609
0.005
0
7mer
49740-49759
0.004
1
7mer
47022-47040
0.003
0
7mer
49431-49450
0.002
1
7mer
50060-50082
0.002
0
8mer
35909-35936
0.002
0
6mer
34498-34515
0.002
3
6mer
37490-37509
0.002
4
7mer
49526-49540
0.002
0
8mer+mismatch
4936-4956
0.002
1
6mer
11217-11233
0.002
2
6mer
32400-32426
0.001
0
7mer
43713-43737
0.001
0
8mer+wobble
27516-27543
0.001
1
6mer
39141-39157
0.001
2
7mer
31543-31561
0.001
1
7mer
45915-45938
0.001
0
7mer
41060-41078
0.001
0
6mer
50660-50683
0.001
3
8mer+wobble
4430-4450
0.001
0
6mer
13596-13617
0.001
0
6mer
48304-48324
0.001
2
6mer
44481-44505
0.001
0
6mer
15124-15137
0.001
1
6mer
33744-33762
0.001
2
6mer
48024-48039
0.001
1
6mer
39691-39710
0.001
0
6mer
33969-33995
0.001
1
6mer
47340-47359
0.001
1
6mer
25593-25617
0.001
Not Conserved
6mer
21654-21680
0.001
1
6mer
14414-14432
0.001
Not Conserved
6mer
36655-36677
0.001
2
RP11-598F7.4
hsa-miR-1294
0.915
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000505893
Biotype: antisense
Gene id: ENSG00000249695
Gene Name: RP11-598F7.4
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-1294
Sequence: ugugagguuggcauuguugucu
MirBase ID: MIMAT0005884
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2864-2879
0.036
2
7mer
629-640
0.003
Not Conserved
7mer
2157-2181
0.003
0
6mer
2243-2269
0.003
2
6mer
803-828
0.002
0
6mer
1468-1477
0.002
0
6mer
1102-1122
0.001
Not Conserved
RP1-39J2.1
hsa-miR-1294
0.915
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000568306
Biotype: lincRNA
Gene id: ENSG00000260771
Gene Name: RP1-39J2.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-1294
Sequence: ugugagguuggcauuguugucu
MirBase ID: MIMAT0005884
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
632-658
0.050
0
MEG3
hsa-miR-1294
0.914
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000555928
Biotype: lincRNA
Gene id: ENSG00000214548
Gene Name: MEG3
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
HREpiC Kidney Normal/Primary
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-1294
Sequence: ugugagguuggcauuguugucu
MirBase ID: MIMAT0005884
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
599-622
0.049
5
STARD13-AS
hsa-miR-1294
0.914
mTTBlnEmP

Gene Details
Chromosome: 13
Transcript: ENST00000608205
Biotype: antisense
Gene id: ENSG00000236581
Gene Name: STARD13-AS
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-1294
Sequence: ugugagguuggcauuguugucu
MirBase ID: MIMAT0005884
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
278-297
0.049
1
Funded by:
We have placed cookies on your device to help make this website and the services we offer better. By using this site, you agree to the use of cookies. Learn more
I accept