LncBase Predicted v.2
Help
Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
Bulk download:
We have updated the bulk download module, which simplifies the download process! Please find the new online form by following this link
Deprecated!
This version is deprecated. Users are strongly advised to only use the latest, up-to-date versions of DIANA-Tools and Databases.
Please follow this link to navigate to the latest database version.

hsa-miR-1294


or   Search by location
Loading... Please wait, this might take a few seconds...



Go to Experimental module
Filters

Gene
miRNA
Score
DIANA Links
ERVH48-1
hsa-miR-1294
0.992
mTTBlnEmP

Gene Details
Chromosome: 21
Transcript: ENST00000617971
Biotype: lincRNA
Gene id: ENSG00000233056
Gene Name: ERVH48-1
UCSC graphic:
Expression:
  Cell Line Tissue Category
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant


miRNA Details
Name: hsa-miR-1294
Sequence: ugugagguuggcauuguugucu
MirBase ID: MIMAT0005884
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
2008-2024
0.066
0
6mer
1685-1709
0.016
0
6mer
726-752
0.006
0
XLOC_013093
hsa-miR-1294
0.990
mTTBlnEmP

Gene Details
Chromosome: chr19
Transcript: TCONS_00027051
Biotype: transcript isomorph
Gene id: XLOC_013093
Gene Name: XLOC_013093
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-1294
Sequence: ugugagguuggcauuguugucu
MirBase ID: MIMAT0005884
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1095-1112
0.027
1
7mer
90-111
0.026
1
6mer
2931-2949
0.020
2
7mer
368-389
0.013
0
CTB-91J4.1
hsa-miR-1294
0.988
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000613949
Biotype: antisense
Gene id: ENSG00000276241
Gene Name: CTB-91J4.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-1294
Sequence: ugugagguuggcauuguugucu
MirBase ID: MIMAT0005884
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
327-334
0.083
0
XLOC_002377
hsa-miR-1294
0.988
mTTBlnEmP

Gene Details
Chromosome: chr2
Transcript: TCONS_00004484
Biotype: transcript isomorph
Gene id: XLOC_002377
Gene Name: XLOC_002377
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Breast Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
- Kidney Normal/Primary
- Liver Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-1294
Sequence: ugugagguuggcauuguugucu
MirBase ID: MIMAT0005884
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
7-27
0.083
1
MEG3
hsa-miR-1294
0.987
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000521256
Biotype: lincRNA
Gene id: ENSG00000214548
Gene Name: MEG3
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
HREpiC Kidney Normal/Primary
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-1294
Sequence: ugugagguuggcauuguugucu
MirBase ID: MIMAT0005884
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
389-412
0.081
5
RP11-154D6.1
hsa-miR-1294
0.986
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000587253
Biotype: antisense
Gene id: ENSG00000232295
Gene Name: RP11-154D6.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
HeLa Cervix Cancer/Malignant


miRNA Details
Name: hsa-miR-1294
Sequence: ugugagguuggcauuguugucu
MirBase ID: MIMAT0005884
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
488-510
0.060
1
7mer
560-575
0.018
1
6mer
262-284
0.003
0
LINC01002
hsa-miR-1294
0.986
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000587051
Biotype: lincRNA
Gene id: ENSG00000206082
Gene Name: LINC01002
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-1294
Sequence: ugugagguuggcauuguugucu
MirBase ID: MIMAT0005884
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1413-1434
0.017
1
8mer
1797-1817
0.015
0
7mer
1308-1327
0.008
1
7mer
1190-1211
0.006
0
6mer
1477-1496
0.006
1
7mer
305-325
0.005
0
7mer
110-136
0.004
Not Conserved
7mer
158-183
0.003
Not Conserved
7mer
61-86
0.003
Not Conserved
7mer
256-283
0.003
Not Conserved
6mer
371-391
0.003
0
6mer
14-39
0.002
Not Conserved
7mer
1159-1172
0.002
Not Conserved
6mer
800-819
0.002
0
6mer
207-225
0.001
Not Conserved
DISC1FP1
hsa-miR-1294
0.986
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000569513
Biotype: retained_intron
Gene id: ENSG00000261645
Gene Name: DISC1FP1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-1294
Sequence: ugugagguuggcauuguugucu
MirBase ID: MIMAT0005884
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
494-511
0.077
1
6mer
1246-1253
0.003
2
RP11-580I1.2
hsa-miR-1294
0.986
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000566676
Biotype: lincRNA
Gene id: ENSG00000261621
Gene Name: RP11-580I1.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor


miRNA Details
Name: hsa-miR-1294
Sequence: ugugagguuggcauuguugucu
MirBase ID: MIMAT0005884
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
548-570
0.080
1
XLOC_011075
hsa-miR-1294
0.986
mTTBlnEmP

Gene Details
Chromosome: chr14
Transcript: TCONS_00022797
Biotype: transcript isomorph
Gene id: XLOC_011075
Gene Name: XLOC_011075
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Colon Normal/Primary
Fibroblasts Foreskin Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
- Kidney Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-1294
Sequence: ugugagguuggcauuguugucu
MirBase ID: MIMAT0005884
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
875-898
0.069
1
7mer
887-910
0.011
0
RP11-438B23.2
hsa-miR-1294
0.985
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000566293
Biotype: sense_overlapping
Gene id: ENSG00000260412
Gene Name: RP11-438B23.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant


miRNA Details
Name: hsa-miR-1294
Sequence: ugugagguuggcauuguugucu
MirBase ID: MIMAT0005884
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
815-833
0.069
10
7mer
1974-2000
0.006
1
7mer
2445-2466
0.003
Not Conserved
6mer
4690-4715
0.001
1
TSIX
hsa-miR-1294
0.985
mTTBlnEmP

Gene Details
Chromosome: X
Transcript: ENST00000604411
Biotype: lincRNA
Gene id: ENSG00000270641
Gene Name: TSIX
UCSC graphic:
Expression:
  Cell Line Tissue Category
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-1294
Sequence: ugugagguuggcauuguugucu
MirBase ID: MIMAT0005884
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
36173-36195
0.020
3
8mer
32596-32616
0.017
1
7mer
36815-36839
0.011
2
7mer
25602-25628
0.005
1
6mer
36423-36444
0.003
1
6mer
36499-36516
0.003
2
6mer
26566-26575
0.002
2
6mer
13-37
0.002
Not Conserved
6mer
27917-27933
0.002
2
6mer
22131-22152
0.002
2
6mer
20021-20038
0.002
1
6mer
4394-4403
0.002
1
6mer
24153-24176
0.001
1
6mer
3892-3911
0.001
0
6mer
26787-26804
0.001
0
6mer
14247-14270
0.001
Not Conserved
6mer
5206-5226
0.001
1
6mer
21040-21054
0.001
1
6mer
7130-7154
0.001
0
6mer
27015-27034
0.001
1
6mer
24316-24339
0.000
0
RP4-669L17.10
hsa-miR-1294
0.985
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: NR_028325.1
Biotype: lincRNA
Gene id: NR_028325.1 (gene)
Gene Name: RP4-669L17.10
UCSC graphic: -
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-1294
Sequence: ugugagguuggcauuguugucu
MirBase ID: MIMAT0005884
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
345-366
0.019
1
7mer
1084-1103
0.009
0
7mer
452-471
0.009
1
6mer
283-302
0.007
1
7mer
795-818
0.007
0
7mer
3959-3978
0.005
0
7mer
568-589
0.004
Not Conserved
6mer
4092-4111
0.003
Not Conserved
7mer
607-620
0.002
Not Conserved
7mer
1348-1367
0.002
Not Conserved
7mer
1746-1765
0.002
Not Conserved
6mer
831-850
0.002
0
6mer
3996-4013
0.001
Not Conserved
7mer
1494-1521
0.001
Not Conserved
7mer
2870-2896
0.001
0
7mer
2634-2654
0.001
0
7mer
2676-2702
0.001
0
7mer
2726-2751
0.001
0
6mer
2140-2159
0.001
0
6mer
2568-2588
0.001
Not Conserved
6mer
2773-2798
0.000
0
6mer
2823-2848
0.000
Not Conserved
RP11-154D6.1
hsa-miR-1294
0.983
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000591156
Biotype: antisense
Gene id: ENSG00000232295
Gene Name: RP11-154D6.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
HeLa Cervix Cancer/Malignant


miRNA Details
Name: hsa-miR-1294
Sequence: ugugagguuggcauuguugucu
MirBase ID: MIMAT0005884
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
691-713
0.077
1
RP11-384K6.6
hsa-miR-1294
0.982
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000567913
Biotype: lincRNA
Gene id: ENSG00000260404
Gene Name: RP11-384K6.6
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-1294
Sequence: ugugagguuggcauuguugucu
MirBase ID: MIMAT0005884
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
223-242
0.021
1
7mer
1962-1981
0.007
0
8mer
3933-3954
0.006
Not Conserved
7mer
1223-1244
0.006
1
7mer
1673-1696
0.004
0
7mer
2635-2654
0.004
Not Conserved
7mer
3360-3379
0.004
Not Conserved
7mer
3674-3695
0.004
Not Conserved
6mer
1161-1180
0.003
1
7mer
2225-2244
0.003
0
7mer
2887-2904
0.002
Not Conserved
7mer
2375-2402
0.002
0
7mer
1340-1349
0.002
0
7mer
1193-1212
0.002
0
6mer
3958-3984
0.001
Not Conserved
6mer
3776-3795
0.001
Not Conserved
6mer
3840-3859
0.001
Not Conserved
6mer
2760-2781
0.001
Not Conserved
6mer
1709-1728
0.001
0
6mer
1480-1498
0.001
Not Conserved
6mer
2832-2850
0.000
Not Conserved
RP11-358B23.5
hsa-miR-1294
0.982
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000592536
Biotype: antisense
Gene id: ENSG00000267758
Gene Name: RP11-358B23.5
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-1294
Sequence: ugugagguuggcauuguugucu
MirBase ID: MIMAT0005884
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
221-248
0.068
3
6mer
29-49
0.008
3
ERVH48-1
hsa-miR-1294
0.982
mTTBlnEmP

Gene Details
Chromosome: 21
Transcript: ENST00000447535
Biotype: lincRNA
Gene id: ENSG00000233056
Gene Name: ERVH48-1
UCSC graphic:
Expression:
  Cell Line Tissue Category
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant


miRNA Details
Name: hsa-miR-1294
Sequence: ugugagguuggcauuguugucu
MirBase ID: MIMAT0005884
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
2455-2471
0.057
0
6mer
2132-2156
0.012
0
6mer
1173-1199
0.004
0
6mer
73-99
0.002
Not Conserved
XLOC_008866
hsa-miR-1294
0.981
mTTBlnEmP

Gene Details
Chromosome: chr10
Transcript: TCONS_00018545
Biotype: transcript isomorph
Gene id: XLOC_008866
Gene Name: XLOC_008866
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Brain Normal/Primary
- Kidney Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-1294
Sequence: ugugagguuggcauuguugucu
MirBase ID: MIMAT0005884
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
54-79
0.038
1
6mer
356-380
0.006
0
6mer
247-267
0.006
0
6mer
337-357
0.005
0
6mer
105-129
0.005
0
6mer
175-188
0.005
0
6mer
287-307
0.005
0
6mer
156-176
0.004
0
XLOC_007993
hsa-miR-1294
0.981
mTTBlnEmP

Gene Details
Chromosome: chrX
Transcript: TCONS_00017181
Biotype: transcript isomorph
Gene id: XLOC_007993
Gene Name: XLOC_007993
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-1294
Sequence: ugugagguuggcauuguugucu
MirBase ID: MIMAT0005884
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
191-211
0.075
4
AC006548.28
hsa-miR-1294
0.981
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000623130
Biotype: sense_overlapping
Gene id: ENSG00000280156
Gene Name: AC006548.28
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-1294
Sequence: ugugagguuggcauuguugucu
MirBase ID: MIMAT0005884
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
62533-62558
0.006
1
8mer
82998-83006
0.005
1
7mer
28596-28613
0.005
0
7mer
59599-59620
0.004
1
7mer
19881-19899
0.004
5
7mer
24085-24110
0.004
1
7mer
24873-24896
0.003
1
8mer
57399-57416
0.003
1
7mer
40503-40526
0.003
1
6mer
83546-83570
0.003
1
6mer
18667-18691
0.002
2
6mer
40240-40261
0.002
2
7mer
58094-58116
0.002
0
6mer
12842-12858
0.002
1
6mer
67661-67676
0.002
0
6mer
3827-3840
0.001
2
6mer
36916-36937
0.001
3
6mer
23673-23687
0.001
1
6mer
12379-12398
0.001
0
7mer
17417-17431
0.001
0
6mer
39941-39964
0.001
1
6mer
42342-42365
0.001
Not Conserved
7mer
36871-36894
0.001
1
6mer
64275-64294
0.001
0
6mer
61917-61943
0.001
1
6mer
44406-44429
0.001
0
6mer
11268-11289
0.001
0
6mer
20507-20524
0.001
1
6mer
68470-68479
0.001
0
6mer
62095-62114
0.001
1
6mer
16101-16123
0.001
0
6mer
19511-19534
0.001
1
6mer
46556-46579
0.001
Not Conserved
6mer
3404-3423
0.001
1
6mer
13902-13927
0.001
1
6mer
9979-10003
0.001
1
6mer
65218-65239
0.001
1
7mer
15714-15737
0.001
1
6mer
5625-5648
0.001
0
6mer
15804-15823
0.001
1
6mer
52030-52055
0.001
Not Conserved
6mer
37248-37265
0.001
Not Conserved
6mer
57325-57333
0.000
0
6mer
58009-58029
0.000
0
6mer
62064-62083
0.000
1
Funded by:
We have placed cookies on your device to help make this website and the services we offer better. By using this site, you agree to the use of cookies. Learn more
I accept