LncBase Predicted v.2
Help
Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
Bulk download:
We have updated the bulk download module, which simplifies the download process! Please find the new online form by following this link
Deprecated!
This version is deprecated. Users are strongly advised to only use the latest, up-to-date versions of DIANA-Tools and Databases.
Please follow this link to navigate to the latest database version.

hsa-miR-128-3p


or   Search by location
Loading... Please wait, this might take a few seconds...



Go to Experimental module
Filters

Gene
miRNA
Score
DIANA Links
AC009948.5
hsa-miR-128-3p
0.994
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000442036
Biotype: antisense
Gene id: ENSG00000223960
Gene Name: AC009948.5
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
LCLBACD2 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-128-3p
Sequence: ucacagugaaccggucucuuu
MirBase ID: MIMAT0000424
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
80-97
0.090
1
6mer
453-466
0.004
1
XXbac-BPGBPG55C20.2
hsa-miR-128-3p
0.994
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000606125
Biotype: lincRNA
Gene id: ENSG00000272316
Gene Name: XXbac-BPGBPG55C20.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-128-3p
Sequence: ucacagugaaccggucucuuu
MirBase ID: MIMAT0000424
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
98-123
0.074
1
7mer
275-280
0.020
1
RP11-89K21.1
hsa-miR-128-3p
0.994
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000560399
Biotype: lincRNA
Gene id: ENSG00000259439
Gene Name: RP11-89K21.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary
SK-N-SH Brain Cancer/Malignant
- Kidney Normal/Primary
A549 Lung Cancer/Malignant
- Prostate Normal/Primary


miRNA Details
Name: hsa-miR-128-3p
Sequence: ucacagugaaccggucucuuu
MirBase ID: MIMAT0000424
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
190-214
0.092
8
6mer
82-94
0.002
0
RP11-326L9.1
hsa-miR-128-3p
0.994
mTTBlnEmP

Gene Details
Chromosome: 13
Transcript: ENST00000622001
Biotype: lincRNA
Gene id: ENSG00000278305
Gene Name: RP11-326L9.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-128-3p
Sequence: ucacagugaaccggucucuuu
MirBase ID: MIMAT0000424
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
131-158
0.093
1
RP11-104O19.4
hsa-miR-128-3p
0.993
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000616113
Biotype: lincRNA
Gene id: ENSG00000274363
Gene Name: RP11-104O19.4
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-128-3p
Sequence: ucacagugaaccggucucuuu
MirBase ID: MIMAT0000424
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
232-254
0.087
2
6mer
526-545
0.005
1
LL22NC03-86G7.1
hsa-miR-128-3p
0.993
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000458178
Biotype: antisense
Gene id: ENSG00000224086
Gene Name: LL22NC03-86G7.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant


miRNA Details
Name: hsa-miR-128-3p
Sequence: ucacagugaaccggucucuuu
MirBase ID: MIMAT0000424
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
53-78
0.017
2
8mer
27606-27629
0.006
Not Conserved
8mer
28303-28319
0.006
1
8mer
35693-35720
0.005
1
7mer
10303-10325
0.004
1
8mer
30685-30695
0.004
1
8mer
28424-28439
0.004
0
8mer
9248-9265
0.004
0
7mer
8627-8641
0.004
3
6mer
581-589
0.003
0
8mer
12308-12322
0.003
0
8mer
31539-31563
0.003
1
6mer
37093-37116
0.003
0
7mer
7036-7063
0.003
1
7mer
27771-27797
0.002
0
6mer
917-929
0.002
1
7mer
20809-20826
0.002
2
6mer
11090-11115
0.002
1
6mer
19003-19023
0.002
1
6mer
16222-16240
0.001
0
7mer
30257-30281
0.001
1
6mer
5834-5856
0.001
1
6mer
3338-3361
0.001
1
6mer
21917-21939
0.001
1
6mer
1044-1061
0.001
1
6mer
27416-27437
0.001
2
6mer
33995-34015
0.001
1
7mer
17841-17855
0.001
1
6mer
35864-35888
0.001
2
6mer
6713-6737
0.001
3
6mer
3443-3463
0.001
2
6mer
15067-15080
0.001
1
7mer
7073-7090
0.001
0
6mer
16246-16269
0.000
1
RP4-665J23.2
hsa-miR-128-3p
0.992
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000425185
Biotype: lincRNA
Gene id: ENSG00000225446
Gene Name: RP4-665J23.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary
Fibroblasts Lung Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-128-3p
Sequence: ucacagugaaccggucucuuu
MirBase ID: MIMAT0000424
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
163-183
0.081
9
6mer
89-104
0.009
7
RP11-111K18.2
hsa-miR-128-3p
0.992
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000569883
Biotype: lincRNA
Gene id: ENSG00000261019
Gene Name: RP11-111K18.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-128-3p
Sequence: ucacagugaaccggucucuuu
MirBase ID: MIMAT0000424
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1102-1126
0.050
1
7mer
1126-1144
0.031
1
6mer
1277-1289
0.009
1
AC009948.5
hsa-miR-128-3p
0.992
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000453026
Biotype: antisense
Gene id: ENSG00000223960
Gene Name: AC009948.5
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
LCLBACD2 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-128-3p
Sequence: ucacagugaaccggucucuuu
MirBase ID: MIMAT0000424
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
73-90
0.087
1
7mer
723-738
0.003
0
XLOC_011873
hsa-miR-128-3p
0.992
mTTBlnEmP

Gene Details
Chromosome: chr16
Transcript: TCONS_00024577
Biotype: transcript isomorph
Gene id: XLOC_011873
Gene Name: XLOC_011873
UCSC graphic: -
Expression:
  Cell Line Tissue Category
HeLa Cervix Cancer/Malignant
- Heart Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-128-3p
Sequence: ucacagugaaccggucucuuu
MirBase ID: MIMAT0000424
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
9-25
0.073
1
8mer
233-250
0.017
0
PROSER2-AS1
hsa-miR-128-3p
0.992
mTTBlnEmP

Gene Details
Chromosome: 10
Transcript: ENST00000453242
Biotype: antisense
Gene id: ENSG00000225778
Gene Name: PROSER2-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant


miRNA Details
Name: hsa-miR-128-3p
Sequence: ucacagugaaccggucucuuu
MirBase ID: MIMAT0000424
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
159-185
0.086
1
6mer
311-326
0.002
1
RP11-356O9.2
hsa-miR-128-3p
0.991
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000556024
Biotype: lincRNA
Gene id: ENSG00000259087
Gene Name: RP11-356O9.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-128-3p
Sequence: ucacagugaaccggucucuuu
MirBase ID: MIMAT0000424
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
256-279
0.082
6
8mer+wobble
194-213
0.007
Not Conserved
RP11-368I7.6
hsa-miR-128-3p
0.991
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000615131
Biotype: antisense
Gene id: ENSG00000275734
Gene Name: RP11-368I7.6
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-128-3p
Sequence: ucacagugaaccggucucuuu
MirBase ID: MIMAT0000424
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
62-80
0.047
1
8mer
333-345
0.037
1
6mer
610-634
0.004
0
AC009948.5
hsa-miR-128-3p
0.991
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000450044
Biotype: antisense
Gene id: ENSG00000223960
Gene Name: AC009948.5
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
LCLBACD2 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-128-3p
Sequence: ucacagugaaccggucucuuu
MirBase ID: MIMAT0000424
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
99-116
0.086
1
6mer
522-537
0.002
0
INO80B-WBP1
hsa-miR-128-3p
0.991
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: NR_037849.1
Biotype: sense
Gene id: NR_037849.1 (gene)
Gene Name: INO80B-WBP1
UCSC graphic: -
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-128-3p
Sequence: ucacagugaaccggucucuuu
MirBase ID: MIMAT0000424
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
341-364
0.072
7
6mer
2016-2039
0.009
8
6mer
1180-1207
0.004
9
6mer
1509-1521
0.002
2
AC009948.5
hsa-miR-128-3p
0.991
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000420672
Biotype: antisense
Gene id: ENSG00000223960
Gene Name: AC009948.5
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
LCLBACD2 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-128-3p
Sequence: ucacagugaaccggucucuuu
MirBase ID: MIMAT0000424
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
128-145
0.088
1
CACNA2D3-AS1
hsa-miR-128-3p
0.990
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000471265
Biotype: antisense
Gene id: ENSG00000243715
Gene Name: CACNA2D3-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-128-3p
Sequence: ucacagugaaccggucucuuu
MirBase ID: MIMAT0000424
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
24-34
0.087
0
AC009948.5
hsa-miR-128-3p
0.990
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000454488
Biotype: antisense
Gene id: ENSG00000223960
Gene Name: AC009948.5
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
LCLBACD2 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-128-3p
Sequence: ucacagugaaccggucucuuu
MirBase ID: MIMAT0000424
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
122-139
0.085
1
MIR6818
hsa-miR-128-3p
0.988
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000624945
Biotype: antisense
Gene id: ENSG00000279159
Gene Name: MIR6818
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-128-3p
Sequence: ucacagugaaccggucucuuu
MirBase ID: MIMAT0000424
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
22257-22275
0.011
0
7mer
41178-41193
0.006
5
9mer
43430-43451
0.005
1
7mer
11545-11560
0.005
2
7mer
40580-40598
0.004
5
6mer
3725-3750
0.003
8
7mer
34355-34371
0.003
1
7mer
32043-32053
0.003
3
6mer
48512-48527
0.003
3
7mer
17079-17099
0.002
0
6mer
28897-28919
0.002
6
6mer
19939-19954
0.002
5
6mer
40995-41017
0.002
5
6mer
7621-7636
0.002
5
6mer
26096-26111
0.002
4
6mer
15291-15316
0.002
4
6mer
9012-9036
0.002
1
6mer
17703-17716
0.002
3
6mer
3344-3367
0.002
1
6mer
38447-38473
0.002
1
6mer
24612-24638
0.002
4
6mer
46120-46137
0.001
1
6mer
15867-15880
0.001
1
6mer
31693-31707
0.001
1
6mer
21687-21711
0.001
0
6mer
24845-24854
0.001
1
6mer
4428-4440
0.001
1
6mer
35398-35416
0.001
1
6mer
47411-47430
0.001
3
6mer
1958-1978
0.001
0
6mer
26843-26863
0.001
1
6mer
39225-39247
0.001
0
6mer
33777-33795
0.001
2
6mer
32198-32208
0.001
0
6mer
31172-31186
0.001
2
6mer
44747-44770
0.001
1
6mer
14194-14211
0.001
0
SNHG14
hsa-miR-128-3p
0.987
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000549804
Biotype: antisense
Gene id: ENSG00000224078
Gene Name: SNHG14
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-128-3p
Sequence: ucacagugaaccggucucuuu
MirBase ID: MIMAT0000424
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
7090-7106
0.058
0
8mer
6169-6189
0.011
0
6mer
7335-7356
0.004
1
6mer
7248-7265
0.003
1
6mer
2586-2601
0.002
0
6mer
5945-5962
0.002
2
6mer
1126-1137
0.001
0
6mer
1128-1144
0.000
0
Funded by:
We have placed cookies on your device to help make this website and the services we offer better. By using this site, you agree to the use of cookies. Learn more
I accept