LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-106b-5p

ENST00000623644

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Gene
miRNA
Score
DIANA Links
chr22-38_28785274-29006793.1
hsa-miR-106b-5p
1.000
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000623644
Biotype: lincRNA
Gene id: ENSG00000279978
Gene Name: chr22-38_28785274-29006793.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-106b-5p
Sequence: uaaagugcugacagugcagau
MirBase ID: MIMAT0000680
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
175909-175927
0.019
3
9mer
89504-89519
0.013
3
8mer
14018-14035
0.010
0
8mer
165227-165239
0.010
4
8mer
220518-220543
0.010
1
8mer
10725-10745
0.009
0
8mer
107252-107269
0.008
1
8mer
52899-52910
0.008
4
8mer
178040-178056
0.007
1
8mer
225499-225516
0.007
1
8mer
251117-251133
0.007
0
7mer
50481-50500
0.006
0
7mer
16900-16922
0.006
1
7mer
133494-133512
0.006
1
7mer
193799-193819
0.006
0
9mer
256647-256667
0.005
0
8mer
199223-199247
0.005
1
7mer
92503-92525
0.005
2
8mer
52138-52155
0.005
1
7mer
917-934
0.005
1
7mer
172347-172358
0.005
2
7mer
161223-161243
0.005
0
8mer+wobble
127340-127359
0.005
1
7mer
56232-56249
0.004
1
7mer
80781-80799
0.004
1
7mer
127893-127913
0.004
0
8mer
155511-155532
0.004
1
8mer
67837-67857
0.004
1
8mer
180846-180864
0.004
1
8mer
221550-221567
0.004
1
8mer
213960-213982
0.004
2
8mer
234653-234670
0.004
1
8mer
261772-261791
0.004
0
7mer
160697-160714
0.004
3
8mer
244863-244887
0.004
0
8mer
250229-250246
0.004
0
7mer
81574-81599
0.004
6
6mer
267038-267054
0.004
0
7mer
175140-175156
0.004
2
8mer
77177-77194
0.004
1
8mer
11456-11473
0.004
1
8mer
67549-67569
0.004
1
7mer
199899-199916
0.004
1
8mer+wobble
167302-167320
0.003
1
8mer
27726-27745
0.003
0
6mer
131803-131819
0.003
7
8mer
236479-236496
0.003
1
8mer
135107-135131
0.003
1
8mer
14163-14180
0.003
1
8mer
109484-109504
0.003
1
8mer
38250-38267
0.003
1
8mer
237872-237892
0.003
1
6mer
100356-100378
0.003
7
8mer
262100-262117
0.003
1
7mer
145526-145539
0.003
0
8mer
102890-102907
0.003
1
8mer
239061-239080
0.003
1
7mer
104448-104470
0.003
2
8mer
188888-188905
0.003
1
6mer
145006-145029
0.003
7
8mer
253394-253411
0.003
1
8mer
249438-249458
0.003
0
8mer
225075-225092
0.003
1
8mer
64974-64991
0.003
1
8mer
223518-223538
0.003
1
8mer
122235-122252
0.003
1
8mer
251555-251572
0.003
0
8mer
252064-252081
0.003
1
8mer
192477-192497
0.003
0
8mer
114901-114918
0.003
1
8mer
60222-60242
0.003
1
8mer
187108-187125
0.003
0
6mer
182715-182734
0.003
7
8mer
14855-14875
0.003
0
8mer
263105-263122
0.003
0
8mer
231656-231673
0.003
0
7mer
101862-101879
0.003
1
7mer
236287-236300
0.003
0
8mer
213280-213300
0.003
0
8mer
174447-174464
0.003
0
8mer
8822-8842
0.003
0
6mer
150454-150475
0.003
5
8mer
73055-73074
0.003
0
7mer
166759-166774
0.003
1
6mer
127550-127569
0.003
2
8mer
84847-84855
0.002
2
8mer
209139-209159
0.002
1
8mer
206106-206131
0.002
0
6mer
183328-183354
0.002
4
6mer
145671-145695
0.002
8
8mer
247889-247909
0.002
0
8mer
45044-45061
0.002
0
7mer
219865-219892
0.002
1
8mer
37460-37484
0.002
Not Conserved
6mer
17535-17546
0.002
1
6mer
131046-131064
0.002
1
6mer
169331-169340
0.002
0
6mer
43071-43091
0.002
1
8mer
193332-193349
0.002
Not Conserved
6mer
197119-197137
0.002
1
6mer
131357-131375
0.002
3
6mer
254579-254600
0.002
5
6mer
166144-166167
0.002
3
7mer
121444-121464
0.002
1
8mer
177421-177441
0.002
1
7mer
23495-23517
0.002
1
6mer
116883-116887
0.002
1
8mer
181153-181170
0.002
Not Conserved
6mer
151340-151355
0.002
3
8mer
202786-202806
0.002
Not Conserved
6mer
13494-13513
0.002
1
6mer
71214-71234
0.002
1
6mer
52419-52433
0.002
4
6mer
203679-203700
0.002
0
6mer
92164-92189
0.002
3
8mer
167722-167739
0.002
1
6mer
11224-11244
0.002
1
6mer
84810-84832
0.002
3
6mer
260798-260814
0.002
1
6mer
69929-69943
0.002
1
6mer
250848-250868
0.002
0
6mer
51814-51832
0.002
3
8mer
231045-231065
0.002
0
6mer
157690-157716
0.002
1
6mer
94115-94141
0.002
5
6mer
184853-184867
0.002
1
6mer
92345-92366
0.002
1
6mer
175013-175037
0.002
0
6mer
198080-198094
0.002
0
6mer
140744-140767
0.002
1
6mer
89894-89915
0.002
1
6mer
109029-109039
0.002
1
6mer
147624-147640
0.002
2
6mer
60617-60632
0.002
2
6mer
4885-4900
0.002
1
6mer
160525-160540
0.002
0
6mer
18598-18611
0.002
1
6mer
41176-41199
0.002
1
6mer
187401-187413
0.002
3
6mer
100978-101000
0.002
2
6mer
113939-113955
0.002
1
6mer
185776-185802
0.002
2
6mer
202300-202318
0.002
Not Conserved
6mer
57316-57324
0.002
1
6mer
136113-136131
0.002
1
6mer
150806-150811
0.002
0
6mer
244007-244026
0.002
1
6mer
109797-109817
0.002
1
6mer
250004-250021
0.002
0
6mer
30049-30073
0.002
1
6mer
177317-177337
0.002
1
6mer
80076-80096
0.001
Not Conserved
6mer
126400-126416
0.001
1
6mer
30917-30934
0.001
1
6mer
179086-179103
0.001
1
6mer
173807-173824
0.001
1
6mer
153974-153999
0.001
1
6mer
175535-175557
0.001
1
6mer
194481-194494
0.001
1
8mer
250901-250921
0.001
0
6mer
61680-61700
0.001
1
6mer
23365-23379
0.001
0
6mer
152913-152934
0.001
0
6mer
48791-48810
0.001
2
6mer
157977-157998
0.001
2
6mer
182848-182871
0.001
3
6mer
228162-228174
0.001
1
6mer
154794-154815
0.001
2
6mer
5567-5585
0.001
3
6mer
195843-195863
0.001
1
8mer+mismatch
229818-229838
0.001
0
6mer
167573-167594
0.001
0
6mer
240525-240543
0.001
1
6mer
255691-255713
0.001
1
6mer
68855-68875
0.001
0
6mer
240008-240028
0.001
1
6mer
200834-200853
0.001
1
6mer
163808-163820
0.001
2
8mer
234713-234732
0.001
0
6mer
255308-255322
0.001
1
6mer
31416-31439
0.001
1
6mer
85207-85227
0.001
1
6mer
35800-35820
0.001
0
6mer
245772-245785
0.001
0
6mer
45886-45904
0.001
1
6mer
183668-183686
0.001
0
6mer
146312-146338
0.001
Not Conserved
6mer
242482-242491
0.001
0
6mer
115886-115906
0.001
1
6mer
98425-98447
0.001
0
6mer
240919-240936
0.001
1
6mer
31773-31786
0.001
Not Conserved
6mer
35333-35354
0.001
1
6mer
121083-121105
0.001
0
6mer
217110-217122
0.001
0
6mer
134405-134430
0.001
1
6mer
177823-177843
0.001
1
6mer
73377-73397
0.001
0
6mer
153372-153389
0.001
0
6mer
92551-92569
0.001
0
6mer
154894-154916
0.001
1
6mer
217222-217242
0.001
0
6mer
89921-89935
0.001
1
7mer
100428-100442
0.001
0
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