LncBase Predicted v.2
Help
Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
Bulk download:
We have updated the bulk download module, which simplifies the download process! Please find the new online form by following this link
Deprecated!
This version is deprecated. Users are strongly advised to only use the latest, up-to-date versions of DIANA-Tools and Databases.
Please follow this link to navigate to the latest database version.

hsa-let-7b-3p


or   Search by location
Loading... Please wait, this might take a few seconds...



Go to Experimental module
Filters

Gene
miRNA
Score
DIANA Links
RP11-510D19.1
hsa-let-7b-3p
0.787
mTTBlnEmP

Gene Details
Chromosome: 18
Transcript: ENST00000568095
Biotype: lincRNA
Gene id: ENSG00000260676
Gene Name: RP11-510D19.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-let-7b-3p
Sequence: cuauacaaccuacugccuuccc
MirBase ID: MIMAT0004482
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
97-103
0.022
1
6mer
633-650
0.004
1
7mer
1714-1728
0.004
0
6mer
1526-1540
0.002
2
XLOC_007710
hsa-let-7b-3p
0.787
mTTBlnEmP

Gene Details
Chromosome: chr9
Transcript: TCONS_00015825
Biotype: transcript isomorph
Gene id: XLOC_007710
Gene Name: XLOC_007710
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
- Brain Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
- Heart Normal/Primary
HREpiC Kidney Normal/Primary
- Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
- Liver Normal/Primary
Fibroblasts Lung Normal/Primary
- Lung Normal/Primary
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- White Blood Cell Normal/Primary
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-let-7b-3p
Sequence: cuauacaaccuacugccuuccc
MirBase ID: MIMAT0004482
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
9-13
0.032
0
XLOC_008081
hsa-let-7b-3p
0.787
mTTBlnEmP

Gene Details
Chromosome: chrX
Transcript: TCONS_00017254
Biotype: transcript isomorph
Gene id: XLOC_008081
Gene Name: XLOC_008081
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor


miRNA Details
Name: hsa-let-7b-3p
Sequence: cuauacaaccuacugccuuccc
MirBase ID: MIMAT0004482
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1374-1384
0.019
1
8mer
1440-1452
0.013
Not Conserved
XLOC_005794
hsa-let-7b-3p
0.786
mTTBlnEmP

Gene Details
Chromosome: chr6
Transcript: TCONS_00012237
Biotype: transcript isomorph
Gene id: XLOC_005794
Gene Name: XLOC_005794
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-let-7b-3p
Sequence: cuauacaaccuacugccuuccc
MirBase ID: MIMAT0004482
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
40-59
0.032
1
MAPKAPK5-AS1
hsa-let-7b-3p
0.786
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000442119
Biotype: lincRNA
Gene id: ENSG00000234608
Gene Name: MAPKAPK5-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant
LCLBAC - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary


miRNA Details
Name: hsa-let-7b-3p
Sequence: cuauacaaccuacugccuuccc
MirBase ID: MIMAT0004482
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
490-507
0.032
0
CTD-2213F21.2
hsa-let-7b-3p
0.783
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000502430
Biotype: antisense
Gene id: ENSG00000250365
Gene Name: CTD-2213F21.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-let-7b-3p
Sequence: cuauacaaccuacugccuuccc
MirBase ID: MIMAT0004482
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1125-1130
0.012
1
7mer
1011-1032
0.011
0
7mer
568-594
0.008
1
RP11-476K15.1
hsa-let-7b-3p
0.783
mTTBlnEmP

Gene Details
Chromosome: 18
Transcript: ENST00000583163
Biotype: lincRNA
Gene id: ENSG00000266602
Gene Name: RP11-476K15.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant


miRNA Details
Name: hsa-let-7b-3p
Sequence: cuauacaaccuacugccuuccc
MirBase ID: MIMAT0004482
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
806-817
0.016
1
6mer
778-782
0.010
1
6mer
785-797
0.006
1
AC079117.1
hsa-let-7b-3p
0.782
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: NR_110284.1
Biotype: antisense
Gene id: NR_110284.1 (gene)
Gene Name: AC079117.1
UCSC graphic: -
Expression: -


miRNA Details
Name: hsa-let-7b-3p
Sequence: cuauacaaccuacugccuuccc
MirBase ID: MIMAT0004482
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
672-677
0.032
6
XLOC_010071
hsa-let-7b-3p
0.781
mTTBlnEmP

Gene Details
Chromosome: chr12
Transcript: TCONS_00020780
Biotype: transcript isomorph
Gene id: XLOC_010071
Gene Name: XLOC_010071
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Lung Normal/Primary
- Ovary Normal/Primary


miRNA Details
Name: hsa-let-7b-3p
Sequence: cuauacaaccuacugccuuccc
MirBase ID: MIMAT0004482
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
216-222
0.032
1
UG0898H09
hsa-let-7b-3p
0.781
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000623646
Biotype: lincRNA
Gene id: ENSG00000274956
Gene Name: UG0898H09
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-let-7b-3p
Sequence: cuauacaaccuacugccuuccc
MirBase ID: MIMAT0004482
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
6676-6693
0.014
8
6mer
6878-6882
0.009
5
6mer
3538-3542
0.003
1
6mer
3352-3356
0.002
1
6mer
3982-3986
0.002
0
6mer
4108-4127
0.002
1
RP11-12D24.10
hsa-let-7b-3p
0.781
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000608422
Biotype: lincRNA
Gene id: ENSG00000272866
Gene Name: RP11-12D24.10
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-let-7b-3p
Sequence: cuauacaaccuacugccuuccc
MirBase ID: MIMAT0004482
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
105-114
0.031
1
RP11-15A1.7
hsa-let-7b-3p
0.781
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000589021
Biotype: antisense
Gene id: ENSG00000266921
Gene Name: RP11-15A1.7
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-let-7b-3p
Sequence: cuauacaaccuacugccuuccc
MirBase ID: MIMAT0004482
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
188-211
0.023
1
7mer
1918-1933
0.008
1
AC079117.1
hsa-let-7b-3p
0.781
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000445178
Biotype: antisense
Gene id: ENSG00000234653
Gene Name: AC079117.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-let-7b-3p
Sequence: cuauacaaccuacugccuuccc
MirBase ID: MIMAT0004482
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
672-677
0.031
6
MAPKAPK5-AS1
hsa-let-7b-3p
0.780
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000443596
Biotype: lincRNA
Gene id: ENSG00000234608
Gene Name: MAPKAPK5-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant
LCLBAC - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary


miRNA Details
Name: hsa-let-7b-3p
Sequence: cuauacaaccuacugccuuccc
MirBase ID: MIMAT0004482
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
822-839
0.031
0
RP11-179B2.2
hsa-let-7b-3p
0.780
mTTBlnEmP

Gene Details
Chromosome: 10
Transcript: ENST00000608554
Biotype: antisense
Gene id: ENSG00000272572
Gene Name: RP11-179B2.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant


miRNA Details
Name: hsa-let-7b-3p
Sequence: cuauacaaccuacugccuuccc
MirBase ID: MIMAT0004482
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
662-688
0.025
1
6mer
300-308
0.006
2
RP5-857K21.2
hsa-let-7b-3p
0.779
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000423796
Biotype: lincRNA
Gene id: ENSG00000235146
Gene Name: RP5-857K21.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-let-7b-3p
Sequence: cuauacaaccuacugccuuccc
MirBase ID: MIMAT0004482
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
419-424
0.031
0
RP11-508N22.12
hsa-let-7b-3p
0.779
mTTBlnEmP

Gene Details
Chromosome: 10
Transcript: ENST00000608335
Biotype: lincRNA
Gene id: ENSG00000272983
Gene Name: RP11-508N22.12
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-let-7b-3p
Sequence: cuauacaaccuacugccuuccc
MirBase ID: MIMAT0004482
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
4275-4301
0.008
0
6mer
6784-6788
0.007
0
6mer
1197-1201
0.006
1
6mer
3279-3290
0.004
1
6mer
996-1000
0.004
0
6mer
5233-5257
0.003
0
XLOC_006336
hsa-let-7b-3p
0.777
mTTBlnEmP

Gene Details
Chromosome: chr7
Transcript: TCONS_00014248
Biotype: transcript isomorph
Gene id: XLOC_006336
Gene Name: XLOC_006336
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
GM12878 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
HREpiC Kidney Normal/Primary
- Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
- Liver Normal/Primary
A549 Lung Cancer/Malignant
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
- Lymph Node Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-let-7b-3p
Sequence: cuauacaaccuacugccuuccc
MirBase ID: MIMAT0004482
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
31-56
0.031
6
XLOC_010754
hsa-let-7b-3p
0.777
mTTBlnEmP

Gene Details
Chromosome: chr14
Transcript: TCONS_00022389
Biotype: transcript isomorph
Gene id: XLOC_010754
Gene Name: XLOC_010754
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
- Liver Normal/Primary
Fibroblasts Lung Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-let-7b-3p
Sequence: cuauacaaccuacugccuuccc
MirBase ID: MIMAT0004482
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
136-150
0.017
1
6mer
92-96
0.009
1
6mer
2804-2826
0.005
1
XLOC_008672
hsa-let-7b-3p
0.776
mTTBlnEmP

Gene Details
Chromosome: chr10
Transcript: TCONS_00018859
Biotype: transcript isomorph
Gene id: XLOC_008672
Gene Name: XLOC_008672
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
- Brain Normal/Primary
SK-N-SH Brain Cancer/Malignant
- Breast Normal/Primary
HeLa Cervix Cancer/Malignant
- Colon Normal/Primary
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
- Kidney Normal/Primary
- Liver Normal/Primary
HepG2 Liver Cancer/Malignant
Fibroblasts Lung Normal/Primary
- Lung Normal/Primary
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
- Lymph Node Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-let-7b-3p
Sequence: cuauacaaccuacugccuuccc
MirBase ID: MIMAT0004482
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
710-734
0.021
3
6mer
629-633
0.010
4
Funded by:
We have placed cookies on your device to help make this website and the services we offer better. By using this site, you agree to the use of cookies. Learn more
I accept