LncBase Experimental v.2
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Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-324-3p


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Go to Predicted module
Filters
Gene
miRNA
Pr. score
DIANA Links
Methods
KCNQ1OT1
hsa-miR-324-3p
1.000
mTTBlnPmP
IP

Gene Details
Chromosome: 11
Transcript: ENST00000597346
Biotype: antisense
Gene id: ENSG00000269821
Gene Name: KCNQ1OT1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
HepG2 Liver Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBAC - Normal/Primary

miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Publication
Tissue
Cell Type
Methods
Karginov FV et al. 2013
Kidney
293S
IP
Tested Cell Line: 293S
Category: Embryonic/Fetal
Experimental Condition: treatment: arsenite
Location
Region
Method
Result
Validation Type
Source
11:2691782-2691810
exon
HITS-CLIP
DIRECT
LncBasev2
11:2661468-2661496
exon
HITS-CLIP
DIRECT
LncBasev2
LINC00176
hsa-miR-324-3p
0.539
mTTBlnPmP
IP

Gene Details
Chromosome: 20
Transcript: ENST00000358393
Biotype: lincRNA
Gene id: ENSG00000196421
Gene Name: LINC00176
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
HepG2 Liver Cancer/Malignant

miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Publication
Tissue
Cell Type
Methods
Karginov FV et al. 2013
Kidney
293S
IP
Tested Cell Line: 293S
Category: Embryonic/Fetal
Experimental Condition: no treatment (control)
Location
Region
Method
Result
Validation Type
Source
20:64039674-64039702
exon
HITS-CLIP
DIRECT
LncBasev2
LINC00641
hsa-miR-324-3p
0.523
mTTBlnPmP
IP

Gene Details
Chromosome: 14
Transcript: ENST00000555379
Biotype: retained_intron
Gene id: ENSG00000258441
Gene Name: LINC00641
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary

miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Publication
Tissue
Cell Type
Methods
Pillai MM et al. 2014
Mammary Gland
BT474
IP
Tested Cell Line: BT474
Category: Cancer/Malignant
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
14:21203531-21203559
exon
HITS-CLIP
DIRECT
LncBasev2
LINC00894
hsa-miR-324-3p
0.399
mTTBlnPmP
IP

Gene Details
Chromosome: X
Transcript: ENST00000458274
Biotype: antisense
Gene id: ENSG00000235703
Gene Name: LINC00894
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
A549 Lung Cancer/Malignant

miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Publication
Tissue
Cell Type
Methods
Karginov FV et al. 2013
Kidney
293S
IP
Tested Cell Line: 293S
Category: Embryonic/Fetal
Experimental Condition: no treatment (control)
Location
Region
Method
Result
Validation Type
Source
X:149939806-149939834
exon
HITS-CLIP
DIRECT
LncBasev2
X:149940031-149940059
exon
HITS-CLIP
DIRECT
LncBasev2
X:149940031-149940059
exon
HITS-CLIP
DIRECT
LncBasev2
LINC01097
hsa-miR-324-3p
0.473
mTTBlnPmP
IP

Gene Details
Chromosome: 4
Transcript: NR_034054.1
Biotype: lincRNA
Gene id: NR_034054.1 (gene)
Gene Name: LINC01097
UCSC graphic: -
Expression: -

miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Publication
Tissue
Cell Type
Methods
Karginov FV et al. 2013
Kidney
293S
IP
Tested Cell Line: 293S
Category: Embryonic/Fetal
Experimental Condition: no treatment (control)
Location
Region
Method
Result
Validation Type
Source
4:13529085-13529113
exon
HITS-CLIP
DIRECT
LncBasev2
LOC100507472
hsa-miR-324-3p
0.619
mTTBlnPmP
IP

Gene Details
Chromosome: 15
Transcript: NR_045387.1
Biotype: sense
Gene id: NR_045387.1 (gene)
Gene Name: LOC100507472
UCSC graphic: -
Expression: -

miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Publication
Tissue
Cell Type
Methods
Karginov FV et al. 2013
Kidney
293S
IP
Tested Cell Line: 293S
Category: Embryonic/Fetal
Experimental Condition: no treatment (control)
Location
Region
Method
Result
Validation Type
Source
15:101308748-101308776
exon
HITS-CLIP
DIRECT
LncBasev2
LOC101927045
hsa-miR-324-3p
0.459
mTTBlnPmP
IP

Gene Details
Chromosome: 14
Transcript: NR_110032.1
Biotype: lincRNA
Gene id: NR_110032.1 (gene)
Gene Name: LOC101927045
UCSC graphic: -
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary

miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Publication
Tissue
Cell Type
Methods
Kameswaran V et al. 2014
Pancreas
Beta cells
IP
Tested Cell Line: Beta cells
Category: -
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
14:24444900-24444928
exon
HITS-CLIP
DIRECT
LncBasev2
LOC90784
hsa-miR-324-3p
0.496
mTTBlnPmP
IP

Gene Details
Chromosome: 2
Transcript: NR_026984.1
Biotype: sense
Gene id: NR_026984.1 (gene)
Gene Name: LOC90784
UCSC graphic: -
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary

miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Publication
Tissue
Cell Type
Methods
Kameswaran V et al. 2014
Pancreas
Beta cells
IP
Tested Cell Line: Beta cells
Category: -
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
2:86020847-86020875
exon
HITS-CLIP
DIRECT
LncBasev2
MALAT1
hsa-miR-324-3p
0.461
mTTBlnPmP
IP

Gene Details
Chromosome: 11
Transcript: ENST00000534336
Biotype: lincRNA
Gene id: ENSG00000251562
Gene Name: MALAT1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
HMEpC Mammary Gland Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD3 - Normal/Primary

miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Publication
Tissue
Cell Type
Methods
Karginov FV et al. 2013
Kidney
293S
IP
Tested Cell Line: 293S
Category: Embryonic/Fetal
Experimental Condition: treatment:hippuristanol
Location
Region
Method
Result
Validation Type
Source
11:65502653-65502681
exon
HITS-CLIP
DIRECT
LncBasev2
11:65500939-65500967
exon
HITS-CLIP
DIRECT
LncBasev2
11:65503670-65503698
exon
HITS-CLIP
DIRECT
LncBasev2
11:65500939-65500967
exon
HITS-CLIP
DIRECT
LncBasev2
11:65499061-65499089
exon
HITS-CLIP
DIRECT
LncBasev2
11:65501846-65501874
exon
HITS-CLIP
DIRECT
LncBasev2
11:65499061-65499089
exon
HITS-CLIP
DIRECT
LncBasev2
11:65501846-65501874
exon
HITS-CLIP
DIRECT
LncBasev2
11:65502653-65502681
exon
HITS-CLIP
DIRECT
LncBasev2
11:65503670-65503698
exon
HITS-CLIP
DIRECT
LncBasev2
11:65500823-65500851
exon
HITS-CLIP
DIRECT
LncBasev2
11:65502653-65502681
exon
HITS-CLIP
DIRECT
LncBasev2
11:65499061-65499089
exon
HITS-CLIP
DIRECT
LncBasev2
11:65500939-65500967
exon
HITS-CLIP
DIRECT
LncBasev2
11:65500939-65500967
exon
HITS-CLIP
DIRECT
LncBasev2
11:65501846-65501874
exon
HITS-CLIP
DIRECT
LncBasev2
11:65502653-65502681
exon
HITS-CLIP
DIRECT
LncBasev2
11:65499061-65499089
exon
HITS-CLIP
DIRECT
LncBasev2
11:65503670-65503698
exon
HITS-CLIP
DIRECT
LncBasev2
11:65501846-65501874
exon
HITS-CLIP
DIRECT
LncBasev2
11:65499061-65499089
exon
HITS-CLIP
DIRECT
LncBasev2
Kameswaran V et al. 2014
Pancreas
Beta cells
IP
Tested Cell Line: Beta cells
Category: -
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
11:65499061-65499089
exon
HITS-CLIP
DIRECT
LncBasev2
Pillai MM et al. 2014
Mammary Gland
BT474
IP
Tested Cell Line: BT474
Category: Cancer/Malignant
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
11:65499061-65499089
exon
HITS-CLIP
DIRECT
LncBasev2
Balakrishnan I et al. 2014
Bone Marrow
HS5
IP
Tested Cell Line: HS5
Category: Normal/Primary
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
11:65500939-65500967
exon
HITS-CLIP
DIRECT
LncBasev2
11:65503670-65503698
exon
HITS-CLIP
DIRECT
LncBasev2
11:65502653-65502681
exon
HITS-CLIP
DIRECT
LncBasev2
11:65501846-65501874
exon
HITS-CLIP
DIRECT
LncBasev2
11:65502653-65502681
exon
HITS-CLIP
DIRECT
LncBasev2
11:65500939-65500967
exon
HITS-CLIP
DIRECT
LncBasev2
Haecker Irina et al. 2012
Bone Marrow
BCBL1
IP
Tested Cell Line: BCBL1
Category: Cancer/Malignant
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
11:65501846-65501874
exon
HITS-CLIP
DIRECT
LncBasev2
11:65499061-65499089
exon
HITS-CLIP
DIRECT
LncBasev2
11:65500939-65500967
exon
HITS-CLIP
DIRECT
LncBasev2
11:65500823-65500851
exon
HITS-CLIP
DIRECT
LncBasev2
11:65503670-65503698
exon
HITS-CLIP
DIRECT
LncBasev2
MEG3
hsa-miR-324-3p
0.456
mTTBlnPmP
IP

Gene Details
Chromosome: 14
Transcript: ENST00000522771
Biotype: lincRNA
Gene id: ENSG00000214548
Gene Name: MEG3
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
HREpiC Kidney Normal/Primary
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant

miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Publication
Tissue
Cell Type
Methods
Kameswaran V et al. 2014
Pancreas
Beta cells
IP
Tested Cell Line: Beta cells
Category: -
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
14:100830156-100830184
exon
HITS-CLIP
DIRECT
LncBasev2
14:100829965-100829993
exon
HITS-CLIP
DIRECT
LncBasev2
MIR17HG
hsa-miR-324-3p
0.499
mTTBlnPmP
IP

Gene Details
Chromosome: 13
Transcript: ENST00000582141
Biotype: retained_intron
Gene id: ENSG00000215417
Gene Name: MIR17HG
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary

miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Publication
Tissue
Cell Type
Methods
Karginov FV et al. 2013
Kidney
293S
IP
Tested Cell Line: 293S
Category: Embryonic/Fetal
Experimental Condition: treatment:hippuristanol
Location
Region
Method
Result
Validation Type
Source
13:91351544-91351572
exon
HITS-CLIP
DIRECT
LncBasev2
13:91351544-91351572
exon
HITS-CLIP
DIRECT
LncBasev2
MIR4534
hsa-miR-324-3p
0.999
mTTBlnPmP
IP

Gene Details
Chromosome: 22
Transcript: ENST00000623111
Biotype: sense_overlapping
Gene id: ENSG00000279010
Gene Name: MIR4534
UCSC graphic:
Expression: -

miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Publication
Tissue
Cell Type
Methods
Karginov FV et al. 2013
Kidney
293S
IP
Tested Cell Line: 293S
Category: Embryonic/Fetal
Experimental Condition: treatment:emetine
Location
Region
Method
Result
Validation Type
Source
22:37977181-37977209
exon
HITS-CLIP
DIRECT
LncBasev2
MYO15B
hsa-miR-324-3p
-
mTTBlnPmP
IP

Gene Details
Chromosome: 17
Transcript: ENST00000610510
Biotype: transcribed_unprocessed_pseudogene
Gene id: ENSG00000266714
Gene Name: MYO15B
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant

miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Publication
Tissue
Cell Type
Methods
Kameswaran V et al. 2014
Pancreas
Beta cells
IP
Tested Cell Line: Beta cells
Category: -
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
17:75610164-75610192
exon
HITS-CLIP
DIRECT
LncBasev2
N4BP2L2-IT2
hsa-miR-324-3p
0.410
mTTBlnPmP
IP

Gene Details
Chromosome: 13
Transcript: NR_026928.1
Biotype: sense
Gene id: NR_026928.1 (gene)
Gene Name: N4BP2L2-IT2
UCSC graphic: -
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
hMSC-BM Bone Marrow Stem/Progenitor
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD2 - Normal/Primary

miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Publication
Tissue
Cell Type
Methods
Pillai MM et al. 2014
Mammary Gland
BT474
IP
Tested Cell Line: BT474
Category: Cancer/Malignant
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
13:32507508-32507536
exon
HITS-CLIP
DIRECT
LncBasev2
Karginov FV et al. 2013
Kidney
293S
IP
Tested Cell Line: 293S
Category: Embryonic/Fetal
Experimental Condition: treatment: emetine
Location
Region
Method
Result
Validation Type
Source
13:32507508-32507536
exon
HITS-CLIP
DIRECT
LncBasev2
NACA3P
hsa-miR-324-3p
-
mTTBlnPmP
IP

Gene Details
Chromosome: 4
Transcript: ENST00000359690
Biotype: processed_pseudogene
Gene id: ENSG00000121089
Gene Name: NACA3P
UCSC graphic:
Expression:
  Cell Line Tissue Category
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary

miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Publication
Tissue
Cell Type
Methods
Kameswaran V et al. 2014
Pancreas
Beta cells
IP
Tested Cell Line: Beta cells
Category: -
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
4:164943848-164943876
exon
HITS-CLIP
DIRECT
LncBasev2
NACAP3
hsa-miR-324-3p
-
mTTBlnPmP
IP

Gene Details
Chromosome: 12
Transcript: ENST00000552100
Biotype: processed_pseudogene
Gene id: ENSG00000257210
Gene Name: NACAP3
UCSC graphic:
Expression:
  Cell Line Tissue Category
LCLBACD3 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary

miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Publication
Tissue
Cell Type
Methods
Kameswaran V et al. 2014
Pancreas
Beta cells
IP
Tested Cell Line: Beta cells
Category: -
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
12:93124119-93124147
exon
HITS-CLIP
DIRECT
LncBasev2
NAP1L4P3
hsa-miR-324-3p
-
mTTBlnPmP
IP

Gene Details
Chromosome: 13
Transcript: ENST00000432820
Biotype: processed_pseudogene
Gene id: ENSG00000234145
Gene Name: NAP1L4P3
UCSC graphic:
Expression: -

miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Publication
Tissue
Cell Type
Methods
Haecker Irina et al. 2012
Pleura
BC3
IP
Tested Cell Line: BC3
Category: Cancer/Malignant
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
13:47764275-47764303
exon
HITS-CLIP
DIRECT
LncBasev2
NDUFA6-AS1
hsa-miR-324-3p
0.386
mTTBlnPmP
IP

Gene Details
Chromosome: 22
Transcript: ENST00000621190
Biotype: antisense
Gene id: ENSG00000237037
Gene Name: NDUFA6-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant

miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Publication
Tissue
Cell Type
Methods
Karginov FV et al. 2013
Kidney
293S
IP
Tested Cell Line: 293S
Category: Embryonic/Fetal
Experimental Condition: no treatment (control)
Location
Region
Method
Result
Validation Type
Source
22:42132512-42132540
exon
HITS-CLIP
DIRECT
LncBasev2
NDUFA9P1
hsa-miR-324-3p
-
mTTBlnPmP
IP

Gene Details
Chromosome: 22
Transcript: ENST00000436210
Biotype: processed_pseudogene
Gene id: ENSG00000237406
Gene Name: NDUFA9P1
UCSC graphic:
Expression: -

miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Publication
Tissue
Cell Type
Methods
Kameswaran V et al. 2014
Pancreas
Beta cells
IP
Tested Cell Line: Beta cells
Category: -
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
22:35897697-35897725
exon
HITS-CLIP
DIRECT
LncBasev2
NEAT1
hsa-miR-324-3p
0.843
mTTBlnPmP
IP

Gene Details
Chromosome: 11
Transcript: ENST00000501122
Biotype: lincRNA
Gene id: ENSG00000245532
Gene Name: NEAT1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary

miRNA Details
Name: hsa-miR-324-3p
Sequence: acugccccaggugcugcugg
MirBase ID: MIMAT0000762
Related Diseases:

Publication
Tissue
Cell Type
Methods
Balakrishnan I et al. 2014
Bone Marrow
HS5
IP
Tested Cell Line: HS5
Category: Normal/Primary
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
11:65442267-65442295
exon
HITS-CLIP
DIRECT
LncBasev2
11:65442267-65442295
exon
HITS-CLIP
DIRECT
LncBasev2
11:65428494-65428522
exon
HITS-CLIP
DIRECT
LncBasev2
11:65428068-65428096
exon
HITS-CLIP
DIRECT
LncBasev2
11:65429935-65429963
exon
HITS-CLIP
DIRECT
LncBasev2
11:65430708-65430736
exon
HITS-CLIP
DIRECT
LncBasev2
Karginov FV et al. 2013
Kidney
293S
IP
Tested Cell Line: 293S
Category: Embryonic/Fetal
Experimental Condition: treatment: emetine
Location
Region
Method
Result
Validation Type
Source
11:65444791-65444819
exon
HITS-CLIP
DIRECT
LncBasev2
11:65426333-65426361
exon
HITS-CLIP
DIRECT
LncBasev2
11:65430708-65430736
exon
HITS-CLIP
DIRECT
LncBasev2
11:65428494-65428522
exon
HITS-CLIP
DIRECT
LncBasev2
11:65430708-65430736
exon
HITS-CLIP
DIRECT
LncBasev2
11:65428494-65428522
exon
HITS-CLIP
DIRECT
LncBasev2
11:65427594-65427622
exon
HITS-CLIP
DIRECT
LncBasev2
11:65443543-65443571
exon
HITS-CLIP
DIRECT
LncBasev2
11:65422953-65422981
exon
HITS-CLIP
DIRECT
LncBasev2
11:65426333-65426361
exon
HITS-CLIP
DIRECT
LncBasev2
11:65429935-65429963
exon
HITS-CLIP
DIRECT
LncBasev2
11:65423193-65423221
exon
HITS-CLIP
DIRECT
LncBasev2
11:65428068-65428096
exon
HITS-CLIP
DIRECT
LncBasev2
11:65430708-65430736
exon
HITS-CLIP
DIRECT
LncBasev2
11:65426333-65426361
exon
HITS-CLIP
DIRECT
LncBasev2
11:65444155-65444183
exon
HITS-CLIP
DIRECT
LncBasev2
11:65443543-65443571
exon
HITS-CLIP
DIRECT
LncBasev2
11:65444791-65444819
exon
HITS-CLIP
DIRECT
LncBasev2
11:65422953-65422981
exon
HITS-CLIP
DIRECT
LncBasev2
11:65423193-65423221
exon
HITS-CLIP
DIRECT
LncBasev2
11:65427594-65427622
exon
HITS-CLIP
DIRECT
LncBasev2
11:65422953-65422981
exon
HITS-CLIP
DIRECT
LncBasev2
11:65426333-65426361
exon
HITS-CLIP
DIRECT
LncBasev2
11:65427594-65427622
exon
HITS-CLIP
DIRECT
LncBasev2
11:65430708-65430736
exon
HITS-CLIP
DIRECT
LncBasev2
11:65423193-65423221
exon
HITS-CLIP
DIRECT
LncBasev2
11:65430708-65430736
exon
HITS-CLIP
DIRECT
LncBasev2
Kameswaran V et al. 2014
Pancreas
Beta cells
IP
Tested Cell Line: Beta cells
Category: -
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
11:65443543-65443571
exon
HITS-CLIP
DIRECT
LncBasev2
11:65426333-65426361
exon
HITS-CLIP
DIRECT
LncBasev2
11:65444155-65444183
exon
HITS-CLIP
DIRECT
LncBasev2
11:65423193-65423221
exon
HITS-CLIP
DIRECT
LncBasev2
11:65435564-65435592
exon
HITS-CLIP
DIRECT
LncBasev2
11:65429935-65429963
exon
HITS-CLIP
DIRECT
LncBasev2
11:65428494-65428522
exon
HITS-CLIP
DIRECT
LncBasev2
11:65422953-65422981
exon
HITS-CLIP
DIRECT
LncBasev2
11:65444791-65444819
exon
HITS-CLIP
DIRECT
LncBasev2
Pillai MM et al. 2014
Mammary Gland
BT474
IP
Tested Cell Line: BT474
Category: Cancer/Malignant
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
11:65427594-65427622
exon
HITS-CLIP
DIRECT
LncBasev2
11:65444791-65444819
exon
HITS-CLIP
DIRECT
LncBasev2
11:65442267-65442295
exon
HITS-CLIP
DIRECT
LncBasev2
11:65429935-65429963
exon
HITS-CLIP
DIRECT
LncBasev2
11:65422953-65422981
exon
HITS-CLIP
DIRECT
LncBasev2
11:65426333-65426361
exon
HITS-CLIP
DIRECT
LncBasev2
11:65428068-65428096
exon
HITS-CLIP
DIRECT
LncBasev2
11:65430708-65430736
exon
HITS-CLIP
DIRECT
LncBasev2
11:65428494-65428522
exon
HITS-CLIP
DIRECT
LncBasev2
11:65435172-65435200
exon
HITS-CLIP
DIRECT
LncBasev2
11:65444155-65444183
exon
HITS-CLIP
DIRECT
LncBasev2
11:65441891-65441919
exon
HITS-CLIP
DIRECT
LncBasev2
Haecker Irina et al. 2012
Bone Marrow
BCBL1
IP
Tested Cell Line: BCBL1
Category: Cancer/Malignant
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
11:65435172-65435200
exon
HITS-CLIP
DIRECT
LncBasev2
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