LncBase Experimental v.2
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Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-200c-3p


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Go to Predicted module
Filters
Gene
miRNA
Pr. score
DIANA Links
Methods
RP11-531A24.3
hsa-miR-200c-3p
0.713
mTTBlnPmP
IP

Gene Details
Chromosome: 8
Transcript: ENST00000564832
Biotype: lincRNA
Gene id: ENSG00000260838
Gene Name: RP11-531A24.3
UCSC graphic:
Expression: -

miRNA Details
Name: hsa-miR-200c-3p
Sequence: uaauacugccggguaaugaugga
MirBase ID: MIMAT0000617
Related Diseases:

Publication
Tissue
Cell Type
Methods
Kameswaran V et al. 2014
Pancreas
Beta cells
IP
Tested Cell Line: Beta cells
Category: -
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
8:72948344-72948372
exon
HITS-CLIP
DIRECT
LncBasev2
RP11-601H16.1
hsa-miR-200c-3p
-
mTTBlnPmP
IP

Gene Details
Chromosome: 2
Transcript: ENST00000604823
Biotype: processed_pseudogene
Gene id: ENSG00000270470
Gene Name: RP11-601H16.1
UCSC graphic:
Expression: -

miRNA Details
Name: hsa-miR-200c-3p
Sequence: uaauacugccggguaaugaugga
MirBase ID: MIMAT0000617
Related Diseases:

Publication
Tissue
Cell Type
Methods
Karginov FV et al. 2013
Kidney
293S
IP
Tested Cell Line: 293S
Category: Embryonic/Fetal
Experimental Condition: treatment:emetine
Location
Region
Method
Result
Validation Type
Source
2:78438329-78438357
exon
HITS-CLIP
DIRECT
LncBasev2
RP11-64K7.1
hsa-miR-200c-3p
-
mTTBlnPmP
IP

Gene Details
Chromosome: 3
Transcript: ENST00000470499
Biotype: processed_pseudogene
Gene id: ENSG00000240854
Gene Name: RP11-64K7.1
UCSC graphic:
Expression: -

miRNA Details
Name: hsa-miR-200c-3p
Sequence: uaauacugccggguaaugaugga
MirBase ID: MIMAT0000617
Related Diseases:

Publication
Tissue
Cell Type
Methods
Pillai MM et al. 2014
Mammary Gland
BT474
IP
Tested Cell Line: BT474
Category: Cancer/Malignant
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
3:132176314-132176342
exon
HITS-CLIP
DIRECT
LncBasev2
Skalsky Rebecca L. et al. 2012
LCLBAC
IP
Tested Cell Line: LCLBAC
Category: Normal/Primary
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
3:132175569-132175597
exon
PAR-CLIP
DIRECT
LncBasev2
RP11-700P18.1
hsa-miR-200c-3p
-
mTTBlnPmP
IP

Gene Details
Chromosome: 7
Transcript: ENST00000449426
Biotype: processed_pseudogene
Gene id: ENSG00000223559
Gene Name: RP11-700P18.1
UCSC graphic:
Expression: -

miRNA Details
Name: hsa-miR-200c-3p
Sequence: uaauacugccggguaaugaugga
MirBase ID: MIMAT0000617
Related Diseases:

Publication
Tissue
Cell Type
Methods
Pillai MM et al. 2014
Mammary Gland
MCF7
IP
Tested Cell Line: MCF7
Category: Cancer/Malignant
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
7:56291196-56291224
exon
HITS-CLIP
DIRECT
LncBasev2
RP11-73M18.8
hsa-miR-200c-3p
0.442
mTTBlnPmP
IP

Gene Details
Chromosome: 14
Transcript: ENST00000602422
Biotype: sense_intronic
Gene id: ENSG00000269958
Gene Name: RP11-73M18.8
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
HMEpC Mammary Gland Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary

miRNA Details
Name: hsa-miR-200c-3p
Sequence: uaauacugccggguaaugaugga
MirBase ID: MIMAT0000617
Related Diseases:

Publication
Tissue
Cell Type
Methods
Pillai MM et al. 2014
Mammary Gland
BT474
IP
Tested Cell Line: BT474
Category: Cancer/Malignant
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
14:103696340-103696368
exon
HITS-CLIP
DIRECT
LncBasev2
RP11-750B16.1
hsa-miR-200c-3p
-
mTTBlnPmP
IP

Gene Details
Chromosome: 17
Transcript: ENST00000574371
Biotype: processed_pseudogene
Gene id: ENSG00000262902
Gene Name: RP11-750B16.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBAC - Normal/Primary
LCLBACD3 - Normal/Primary

miRNA Details
Name: hsa-miR-200c-3p
Sequence: uaauacugccggguaaugaugga
MirBase ID: MIMAT0000617
Related Diseases:

Publication
Tissue
Cell Type
Methods
Pillai MM et al. 2014
Mammary Gland
BT474
IP
Tested Cell Line: BT474
Category: Cancer/Malignant
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
17:53105753-53105781
exon
HITS-CLIP
DIRECT
LncBasev2
Kameswaran V et al. 2014
Pancreas
Beta cells
IP
Tested Cell Line: Beta cells
Category: -
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
17:53106188-53106216
exon
HITS-CLIP
DIRECT
LncBasev2
RP4-533D7.3
hsa-miR-200c-3p
-
mTTBlnPmP
IP

Gene Details
Chromosome: 1
Transcript: ENST00000426289
Biotype: processed_pseudogene
Gene id: ENSG00000233114
Gene Name: RP4-533D7.3
UCSC graphic:
Expression: -

miRNA Details
Name: hsa-miR-200c-3p
Sequence: uaauacugccggguaaugaugga
MirBase ID: MIMAT0000617
Related Diseases:

Publication
Tissue
Cell Type
Methods
Kameswaran V et al. 2014
Pancreas
Beta cells
IP
Tested Cell Line: Beta cells
Category: -
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
1:46105030-46105058
exon
HITS-CLIP
DIRECT
LncBasev2
RP5-857K21.11
hsa-miR-200c-3p
-
mTTBlnPmP
IP

Gene Details
Chromosome: 1
Transcript: ENST00000416718
Biotype: unprocessed_pseudogene
Gene id: ENSG00000198744
Gene Name: RP5-857K21.11
UCSC graphic:
Expression:
  Cell Line Tissue Category
MCF7 Mammary Gland Cancer/Malignant

miRNA Details
Name: hsa-miR-200c-3p
Sequence: uaauacugccggguaaugaugga
MirBase ID: MIMAT0000617
Related Diseases:

Publication
Tissue
Cell Type
Methods
Xue Y et al. 2013
Cervix
HELA
IP
Tested Cell Line: HELA
Category: Cancer/Malignant
Experimental Condition: Hela cells were treated with control shRNA.
Location
Region
Method
Result
Validation Type
Source
1:634758-634786
exon
HITS-CLIP
DIRECT
LncBasev2
RPL21P3
hsa-miR-200c-3p
-
mTTBlnPmP
IP

Gene Details
Chromosome: 20
Transcript: ENST00000395517
Biotype: processed_pseudogene
Gene id: ENSG00000225419
Gene Name: RPL21P3
UCSC graphic:
Expression: -

miRNA Details
Name: hsa-miR-200c-3p
Sequence: uaauacugccggguaaugaugga
MirBase ID: MIMAT0000617
Related Diseases:

Publication
Tissue
Cell Type
Methods
Kameswaran V et al. 2014
Pancreas
Beta cells
IP
Tested Cell Line: Beta cells
Category: -
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
20:18485438-18485466
exon
HITS-CLIP
DIRECT
LncBasev2
RPL23AP64
hsa-miR-200c-3p
-
mTTBlnPmP
IP

Gene Details
Chromosome: 11
Transcript: ENST00000469465
Biotype: processed_pseudogene
Gene id: ENSG00000240970
Gene Name: RPL23AP64
UCSC graphic:
Expression: -

miRNA Details
Name: hsa-miR-200c-3p
Sequence: uaauacugccggguaaugaugga
MirBase ID: MIMAT0000617
Related Diseases:

Publication
Tissue
Cell Type
Methods
Kameswaran V et al. 2014
Pancreas
Beta cells
IP
Tested Cell Line: Beta cells
Category: -
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
11:119003367-119003395
exon
HITS-CLIP
DIRECT
LncBasev2
RPL23AP78
hsa-miR-200c-3p
-
mTTBlnPmP
IP

Gene Details
Chromosome: 19
Transcript: ENST00000599928
Biotype: processed_pseudogene
Gene id: ENSG00000269244
Gene Name: RPL23AP78
UCSC graphic:
Expression: -

miRNA Details
Name: hsa-miR-200c-3p
Sequence: uaauacugccggguaaugaugga
MirBase ID: MIMAT0000617
Related Diseases:

Publication
Tissue
Cell Type
Methods
Kameswaran V et al. 2014
Pancreas
Beta cells
IP
Tested Cell Line: Beta cells
Category: -
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
19:8729118-8729146
exon
HITS-CLIP
DIRECT
LncBasev2
RPL24P4
hsa-miR-200c-3p
-
mTTBlnPmP
IP

Gene Details
Chromosome: 6
Transcript: ENST00000326586
Biotype: processed_pseudogene
Gene id: ENSG00000181524
Gene Name: RPL24P4
UCSC graphic:
Expression:
  Cell Line Tissue Category
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary

miRNA Details
Name: hsa-miR-200c-3p
Sequence: uaauacugccggguaaugaugga
MirBase ID: MIMAT0000617
Related Diseases:

Publication
Tissue
Cell Type
Methods
Haecker Irina et al. 2012
Bone Marrow
BCBL1
IP
Tested Cell Line: BCBL1
Category: Cancer/Malignant
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
6:42956704-42956732
exon
HITS-CLIP
DIRECT
LncBasev2
Pillai MM et al. 2014
Mammary Gland
BT474
IP
Tested Cell Line: BT474
Category: Cancer/Malignant
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
6:42956704-42956732
exon
HITS-CLIP
DIRECT
LncBasev2
SNHG15
hsa-miR-200c-3p
0.519
mTTBlnPmP
IP

Gene Details
Chromosome: 7
Transcript: ENST00000577700
Biotype: lincRNA
Gene id: ENSG00000232956
Gene Name: SNHG15
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD3 - Normal/Primary

miRNA Details
Name: hsa-miR-200c-3p
Sequence: uaauacugccggguaaugaugga
MirBase ID: MIMAT0000617
Related Diseases:

Publication
Tissue
Cell Type
Methods
Karginov FV et al. 2013
Kidney
293S
IP
Tested Cell Line: 293S
Category: Embryonic/Fetal
Experimental Condition: treatment:hippuristanol
Location
Region
Method
Result
Validation Type
Source
7:44985839-44985867
exon
HITS-CLIP
DIRECT
LncBasev2
SNHG22
hsa-miR-200c-3p
0.561
mTTBlnPmP
IP

Gene Details
Chromosome: 18
Transcript: ENST00000615535
Biotype: antisense
Gene id: ENSG00000267322
Gene Name: SNHG22
UCSC graphic:
Expression: -

miRNA Details
Name: hsa-miR-200c-3p
Sequence: uaauacugccggguaaugaugga
MirBase ID: MIMAT0000617
Related Diseases:

Publication
Tissue
Cell Type
Methods
Karginov FV et al. 2013
Kidney
293S
IP
Tested Cell Line: 293S
Category: Embryonic/Fetal
Experimental Condition: no treatment (control)
Location
Region
Method
Result
Validation Type
Source
18:49814148-49814176
exon
HITS-CLIP
DIRECT
LncBasev2
TP73-AS1
hsa-miR-200c-3p
0.417
mTTBlnPmP
IP

Gene Details
Chromosome: 1
Transcript: ENST00000452079
Biotype: antisense
Gene id: ENSG00000227372
Gene Name: TP73-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary

miRNA Details
Name: hsa-miR-200c-3p
Sequence: uaauacugccggguaaugaugga
MirBase ID: MIMAT0000617
Related Diseases:

Publication
Tissue
Cell Type
Methods
Karginov FV et al. 2013
Kidney
293S
IP
Tested Cell Line: 293S
Category: Embryonic/Fetal
Experimental Condition: no treatment (control)
Location
Region
Method
Result
Validation Type
Source
1:3738545-3738573
exon
HITS-CLIP
DIRECT
LncBasev2
TP73-AS1
hsa-miR-200c-3p
0.413
mTTBlnPmP
IP

Gene Details
Chromosome: 1
Transcript: NR_033710.1
Biotype: antisense
Gene id: NR_033710.1 (gene)
Gene Name: TP73-AS1
UCSC graphic: -
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor

miRNA Details
Name: hsa-miR-200c-3p
Sequence: uaauacugccggguaaugaugga
MirBase ID: MIMAT0000617
Related Diseases:

Publication
Tissue
Cell Type
Methods
Karginov FV et al. 2013
Kidney
293S
IP
Tested Cell Line: 293S
Category: Embryonic/Fetal
Experimental Condition: no treatment (control)
Location
Region
Method
Result
Validation Type
Source
1:3738545-3738573
exon
HITS-CLIP
DIRECT
LncBasev2
TUG1
hsa-miR-200c-3p
0.445
mTTBlnPmP
IP

Gene Details
Chromosome: 22
Transcript: ENST00000519077
Biotype: antisense
Gene id: ENSG00000253352
Gene Name: TUG1
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
- Brain Normal/Primary
- Breast Normal/Primary
HeLa Cervix Cancer/Malignant
- Colon Normal/Primary
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
HREpiC Kidney Normal/Primary
- Liver Normal/Primary
HepG2 Liver Cancer/Malignant
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
- Lymph Node Normal/Primary
HMEpC Mammary Gland Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary

miRNA Details
Name: hsa-miR-200c-3p
Sequence: uaauacugccggguaaugaugga
MirBase ID: MIMAT0000617
Related Diseases:

Publication
Tissue
Cell Type
Methods
Eva Gottwein et al. 2011
Pleura
BC1
IP
Tested Cell Line: BC1
Category: Cancer/Malignant
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
22:30979304-30979332
exon
PAR-CLIP
DIRECT
LncBasev2
UG0898H09
hsa-miR-200c-3p
0.531
mTTBlnPmP
IP

Gene Details
Chromosome: 8
Transcript: ENST00000623646
Biotype: lincRNA
Gene id: ENSG00000274956
Gene Name: UG0898H09
UCSC graphic:
Expression: -

miRNA Details
Name: hsa-miR-200c-3p
Sequence: uaauacugccggguaaugaugga
MirBase ID: MIMAT0000617
Related Diseases:

Publication
Tissue
Cell Type
Methods
Karginov FV et al. 2013
Kidney
293S
IP
Tested Cell Line: 293S
Category: Embryonic/Fetal
Experimental Condition: treatment:emetine
Location
Region
Method
Result
Validation Type
Source
8:62983271-62983299
exon
HITS-CLIP
DIRECT
LncBasev2
XIST
hsa-miR-200c-3p
0.965
mTTBlnPmP
IP

Gene Details
Chromosome: X
Transcript: ENST00000429829
Biotype: lincRNA
Gene id: ENSG00000229807
Gene Name: XIST
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
- Brain Normal/Primary
SK-N-SH Brain Cancer/Malignant
- Breast Normal/Primary
HeLa Cervix Cancer/Malignant
- Colon Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
Fibroblasts Lung Normal/Primary
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
- Lymph Node Normal/Primary
HMEpC Mammary Gland Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary

miRNA Details
Name: hsa-miR-200c-3p
Sequence: uaauacugccggguaaugaugga
MirBase ID: MIMAT0000617
Related Diseases:

Publication
Tissue
Cell Type
Methods
Karginov FV et al. 2013
Kidney
293S
IP
Tested Cell Line: 293S
Category: Embryonic/Fetal
Experimental Condition: treatment: arsenite
Location
Region
Method
Result
Validation Type
Source
X:73842552-73842580
exon
HITS-CLIP
DIRECT
LncBasev2
X:73826507-73826535
exon
HITS-CLIP
DIRECT
LncBasev2
X:73825082-73825110
exon
HITS-CLIP
DIRECT
LncBasev2
X:73845849-73845877
exon
HITS-CLIP
DIRECT
LncBasev2
X:73846137-73846165
exon
HITS-CLIP
DIRECT
LncBasev2
X:73851467-73851495
exon
HITS-CLIP
DIRECT
LncBasev2
X:73825556-73825584
exon
HITS-CLIP
DIRECT
LncBasev2
X:73822767-73822795
exon
HITS-CLIP
DIRECT
LncBasev2
X:73827446-73827474
exon
HITS-CLIP
DIRECT
LncBasev2
X:73851467-73851495
exon
HITS-CLIP
DIRECT
LncBasev2
X:73825082-73825110
exon
HITS-CLIP
DIRECT
LncBasev2
X:73831235-73831263
exon
HITS-CLIP
DIRECT
LncBasev2
X:73826507-73826535
exon
HITS-CLIP
DIRECT
LncBasev2
X:73827386-73827414
exon
HITS-CLIP
DIRECT
LncBasev2
X:73843039-73843067
exon
HITS-CLIP
DIRECT
LncBasev2
X:73842552-73842580
exon
HITS-CLIP
DIRECT
LncBasev2
X:73845849-73845877
exon
HITS-CLIP
DIRECT
LncBasev2
X:73851467-73851495
exon
HITS-CLIP
DIRECT
LncBasev2
X:73845849-73845877
exon
HITS-CLIP
DIRECT
LncBasev2
X:73827386-73827414
exon
HITS-CLIP
DIRECT
LncBasev2
X:73842552-73842580
exon
HITS-CLIP
DIRECT
LncBasev2
X:73825082-73825110
exon
HITS-CLIP
DIRECT
LncBasev2
X:73831235-73831263
exon
HITS-CLIP
DIRECT
LncBasev2
X:73842552-73842580
exon
HITS-CLIP
DIRECT
LncBasev2
X:73827446-73827474
exon
HITS-CLIP
DIRECT
LncBasev2
X:73831235-73831263
exon
HITS-CLIP
DIRECT
LncBasev2
XLOC_002997
hsa-miR-200c-3p
-
mTTBlnPmP
IP

Gene Details
Chromosome: chr3
Transcript: TCONS_00006381
Biotype: transcript isomorph
Gene id: XLOC_002997
Gene Name: XLOC_002997
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
K562 Blood Cancer/Malignant
- Brain Normal/Primary
SK-N-SH Brain Cancer/Malignant
- Breast Normal/Primary
HeLa Cervix Cancer/Malignant
- Colon Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
- Liver Normal/Primary
A549 Lung Cancer/Malignant
Fibroblasts Lung Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary

miRNA Details
Name: hsa-miR-200c-3p
Sequence: uaauacugccggguaaugaugga
MirBase ID: MIMAT0000617
Related Diseases:

Publication
Tissue
Cell Type
Methods
Pillai MM et al. 2014
Mammary Gland
BT474
IP
Tested Cell Line: BT474
Category: Cancer/Malignant
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
chr3:195711866-195711894
exon
HITS-CLIP
DIRECT
LncBasev2
Funded by:
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