LncBase Experimental v.2
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Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-182-5p


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Go to Predicted module
Filters
Gene
miRNA
Pr. score
DIANA Links
Methods
LINC01000
hsa-miR-182-5p
0.545
mTTBlnPmP
IP

Gene Details
Chromosome: 7
Transcript: NR_024368.1
Biotype: lincRNA
Gene id: NR_024368.1 (gene)
Gene Name: LINC01000
UCSC graphic: -
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD2 - Normal/Primary

miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Publication
Tissue
Cell Type
Methods
Eva Gottwein et al. 2011
Pleura
BC1
IP
Tested Cell Line: BC1
Category: Cancer/Malignant
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
7:128660266-128660294
exon
PAR-CLIP
DIRECT
LncBasev2
LINC01004
hsa-miR-182-5p
0.813
mTTBlnPmP
IP

Gene Details
Chromosome: 7
Transcript: NR_039981.2
Biotype: lincRNA
Gene id: NR_039981.2 (gene)
Gene Name: LINC01004
UCSC graphic: -
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD1 - Normal/Primary

miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Publication
Tissue
Cell Type
Methods
Kameswaran V et al. 2014
Pancreas
Beta cells
IP
Tested Cell Line: Beta cells
Category: -
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
7:104986098-104986126
exon
HITS-CLIP
DIRECT
LncBasev2
LOC100289495
hsa-miR-182-5p
0.375
mTTBlnPmP
IP

Gene Details
Chromosome: 6
Transcript: NR_040022.1
Biotype: lincRNA
Gene id: NR_040022.1 (gene)
Gene Name: LOC100289495
UCSC graphic: -
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
LCLBACD3 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary

miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Publication
Tissue
Cell Type
Methods
Kameswaran V et al. 2014
Pancreas
Beta cells
IP
Tested Cell Line: Beta cells
Category: -
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
6:166351065-166351093
exon
HITS-CLIP
DIRECT
LncBasev2
LOC100506124
hsa-miR-182-5p
0.467
mTTBlnPmP
IP

Gene Details
Chromosome: 2
Transcript: NR_045375.1
Biotype: sense
Gene id: NR_045375.1 (gene)
Gene Name: LOC100506124
UCSC graphic: -
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant

miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Publication
Tissue
Cell Type
Methods
Karginov FV et al. 2013
Kidney
293S
IP
Tested Cell Line: 293S
Category: Embryonic/Fetal
Experimental Condition: treatment: emetine
Location
Region
Method
Result
Validation Type
Source
2:165862973-165863001
exon
HITS-CLIP
DIRECT
LncBasev2
LOC100507472
hsa-miR-182-5p
0.383
mTTBlnPmP
IP

Gene Details
Chromosome: 15
Transcript: NR_045387.1
Biotype: sense
Gene id: NR_045387.1 (gene)
Gene Name: LOC100507472
UCSC graphic: -
Expression: -

miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Publication
Tissue
Cell Type
Methods
Karginov FV et al. 2013
Kidney
293S
IP
Tested Cell Line: 293S
Category: Embryonic/Fetal
Experimental Condition: treatment:emetine
Location
Region
Method
Result
Validation Type
Source
15:101307556-101307584
exon
HITS-CLIP
DIRECT
LncBasev2
LRRC37BP1
hsa-miR-182-5p
-
mTTBlnPmP
IP

Gene Details
Chromosome: 17
Transcript: ENST00000417404
Biotype: processed_transcript
Gene id: ENSG00000250462
Gene Name: LRRC37BP1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant
LCLBACD2 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD3 - Normal/Primary

miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Publication
Tissue
Cell Type
Methods
Kameswaran V et al. 2014
Pancreas
Beta cells
IP
Tested Cell Line: Beta cells
Category: -
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
17:30633209-30633237
exon
HITS-CLIP
DIRECT
LncBasev2
MALAT1
hsa-miR-182-5p
0.697
mTTBlnPmP
IP

Gene Details
Chromosome: 11
Transcript: ENST00000534336
Biotype: lincRNA
Gene id: ENSG00000251562
Gene Name: MALAT1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
HMEpC Mammary Gland Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD3 - Normal/Primary

miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Publication
Tissue
Cell Type
Methods
Karginov FV et al. 2013
Kidney
293S
IP
Tested Cell Line: 293S
Category: Embryonic/Fetal
Experimental Condition: treatment:emetine
Location
Region
Method
Result
Validation Type
Source
11:65500947-65500975
exon
HITS-CLIP
DIRECT
LncBasev2
11:65502797-65502825
exon
HITS-CLIP
DIRECT
LncBasev2
11:65500712-65500740
exon
HITS-CLIP
DIRECT
LncBasev2
11:65501762-65501790
exon
HITS-CLIP
DIRECT
LncBasev2
11:65503072-65503100
exon
HITS-CLIP
DIRECT
LncBasev2
11:65501586-65501614
exon
HITS-CLIP
DIRECT
LncBasev2
11:65503072-65503100
exon
HITS-CLIP
DIRECT
LncBasev2
11:65499936-65499964
exon
HITS-CLIP
DIRECT
LncBasev2
11:65500947-65500975
exon
HITS-CLIP
DIRECT
LncBasev2
11:65502797-65502825
exon
HITS-CLIP
DIRECT
LncBasev2
11:65500712-65500740
exon
HITS-CLIP
DIRECT
LncBasev2
11:65503984-65504012
exon
HITS-CLIP
DIRECT
LncBasev2
11:65501032-65501060
exon
HITS-CLIP
DIRECT
LncBasev2
11:65501762-65501790
exon
HITS-CLIP
DIRECT
LncBasev2
11:65503072-65503100
exon
HITS-CLIP
DIRECT
LncBasev2
11:65500712-65500740
exon
HITS-CLIP
DIRECT
LncBasev2
11:65500947-65500975
exon
HITS-CLIP
DIRECT
LncBasev2
11:65501762-65501790
exon
HITS-CLIP
DIRECT
LncBasev2
11:65503072-65503100
exon
HITS-CLIP
DIRECT
LncBasev2
11:65500712-65500740
exon
HITS-CLIP
DIRECT
LncBasev2
11:65502797-65502825
exon
HITS-CLIP
DIRECT
LncBasev2
11:65501762-65501790
exon
HITS-CLIP
DIRECT
LncBasev2
11:65501586-65501614
exon
HITS-CLIP
DIRECT
LncBasev2
11:65500947-65500975
exon
HITS-CLIP
DIRECT
LncBasev2
11:65502797-65502825
exon
HITS-CLIP
DIRECT
LncBasev2
11:65503072-65503100
exon
HITS-CLIP
DIRECT
LncBasev2
11:65501032-65501060
exon
HITS-CLIP
DIRECT
LncBasev2
Haecker Irina et al. 2012
Bone Marrow
BCBL1
IP
Tested Cell Line: BCBL1
Category: Cancer/Malignant
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
11:65503072-65503100
exon
HITS-CLIP
DIRECT
LncBasev2
11:65501032-65501060
exon
HITS-CLIP
DIRECT
LncBasev2
11:65499936-65499964
exon
HITS-CLIP
DIRECT
LncBasev2
11:65502797-65502825
exon
HITS-CLIP
DIRECT
LncBasev2
11:65499859-65499887
exon
HITS-CLIP
DIRECT
LncBasev2
11:65500712-65500740
exon
HITS-CLIP
DIRECT
LncBasev2
11:65501586-65501614
exon
HITS-CLIP
DIRECT
LncBasev2
11:65500947-65500975
exon
HITS-CLIP
DIRECT
LncBasev2
Pillai MM et al. 2014
Mammary Gland
MCF7
IP
Tested Cell Line: MCF7
Category: Cancer/Malignant
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
11:65502797-65502825
exon
HITS-CLIP
DIRECT
LncBasev2
11:65501762-65501790
exon
HITS-CLIP
DIRECT
LncBasev2
11:65503072-65503100
exon
HITS-CLIP
DIRECT
LncBasev2
11:65500947-65500975
exon
HITS-CLIP
DIRECT
LncBasev2
11:65499936-65499964
exon
HITS-CLIP
DIRECT
LncBasev2
11:65501586-65501614
exon
HITS-CLIP
DIRECT
LncBasev2
11:65501032-65501060
exon
HITS-CLIP
DIRECT
LncBasev2
11:65500712-65500740
exon
HITS-CLIP
DIRECT
LncBasev2
11:65503072-65503100
exon
HITS-CLIP
DIRECT
LncBasev2
11:65501586-65501614
exon
HITS-CLIP
DIRECT
LncBasev2
11:65502797-65502825
exon
HITS-CLIP
DIRECT
LncBasev2
11:65500947-65500975
exon
HITS-CLIP
DIRECT
LncBasev2
11:65501762-65501790
exon
HITS-CLIP
DIRECT
LncBasev2
11:65500712-65500740
exon
HITS-CLIP
DIRECT
LncBasev2
MT1XP1
hsa-miR-182-5p
-
mTTBlnPmP
IP

Gene Details
Chromosome: 1
Transcript: ENST00000421314
Biotype: processed_pseudogene
Gene id: ENSG00000233929
Gene Name: MT1XP1
UCSC graphic:
Expression: -

miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Publication
Tissue
Cell Type
Methods
Kameswaran V et al. 2014
Pancreas
Beta cells
IP
Tested Cell Line: Beta cells
Category: -
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
1:16241270-16241298
exon
HITS-CLIP
DIRECT
LncBasev2
MT2P1
hsa-miR-182-5p
-
mTTBlnPmP
IP

Gene Details
Chromosome: 4
Transcript: ENST00000262499
Biotype: processed_pseudogene
Gene id: ENSG00000162840
Gene Name: MT2P1
UCSC graphic:
Expression: -

miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Publication
Tissue
Cell Type
Methods
Kameswaran V et al. 2014
Pancreas
Beta cells
IP
Tested Cell Line: Beta cells
Category: -
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
4:68376423-68376451
exon
HITS-CLIP
DIRECT
LncBasev2
NAMPTL
hsa-miR-182-5p
-
mTTBlnPmP
IP

Gene Details
Chromosome: 10
Transcript: ENST00000440465
Biotype: processed_pseudogene
Gene id: ENSG00000229644
Gene Name: NAMPTL
UCSC graphic:
Expression:
  Cell Line Tissue Category
HeLa Cervix Cancer/Malignant
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary

miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Publication
Tissue
Cell Type
Methods
Kameswaran V et al. 2014
Pancreas
Beta cells
IP
Tested Cell Line: Beta cells
Category: -
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
10:36522550-36522578
exon
HITS-CLIP
DIRECT
LncBasev2
NEAT1
hsa-miR-182-5p
0.698
mTTBlnPmP
IP

Gene Details
Chromosome: 11
Transcript: ENST00000501122
Biotype: lincRNA
Gene id: ENSG00000245532
Gene Name: NEAT1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary

miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Publication
Tissue
Cell Type
Methods
Kameswaran V et al. 2014
Pancreas
Beta cells
IP
Tested Cell Line: Beta cells
Category: -
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
11:65443773-65443801
exon
HITS-CLIP
DIRECT
LncBasev2
11:65435670-65435698
exon
HITS-CLIP
DIRECT
LncBasev2
Karginov FV et al. 2013
Kidney
293S
IP
Tested Cell Line: 293S
Category: Embryonic/Fetal
Experimental Condition: treatment: arsenite
Location
Region
Method
Result
Validation Type
Source
11:65443773-65443801
exon
HITS-CLIP
DIRECT
LncBasev2
11:65435670-65435698
exon
HITS-CLIP
DIRECT
LncBasev2
11:65443773-65443801
exon
HITS-CLIP
DIRECT
LncBasev2
11:65438933-65438961
exon
HITS-CLIP
DIRECT
LncBasev2
11:65435670-65435698
exon
HITS-CLIP
DIRECT
LncBasev2
Pillai MM et al. 2014
Mammary Gland
MCF7
IP
Tested Cell Line: MCF7
Category: Cancer/Malignant
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
11:65428087-65428115
exon
HITS-CLIP
DIRECT
LncBasev2
11:65435670-65435698
exon
HITS-CLIP
DIRECT
LncBasev2
Xue Y et al. 2013
Cervix
HELA
IP
Tested Cell Line: HELA
Category: Cancer/Malignant
Experimental Condition: Hela cells were treated with control shRN.
Location
Region
Method
Result
Validation Type
Source
11:65438933-65438961
exon
HITS-CLIP
DIRECT
LncBasev2
PABPC1P4
hsa-miR-182-5p
-
mTTBlnPmP
IP

Gene Details
Chromosome: 12
Transcript: ENST00000539977
Biotype: processed_pseudogene
Gene id: ENSG00000255642
Gene Name: PABPC1P4
UCSC graphic:
Expression:
  Cell Line Tissue Category
IMR90 Lung Embryonic/Fetal/Stem/Progenitor

miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Publication
Tissue
Cell Type
Methods
Kameswaran V et al. 2014
Pancreas
Beta cells
IP
Tested Cell Line: Beta cells
Category: -
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
12:63823264-63823292
exon
HITS-CLIP
DIRECT
LncBasev2
Pillai MM et al. 2014
Mammary Gland
MCF7
IP
Tested Cell Line: MCF7
Category: Cancer/Malignant
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
12:63823264-63823292
exon
HITS-CLIP
DIRECT
LncBasev2
PCAT19
hsa-miR-182-5p
0.916
mTTBlnPmP
IP

Gene Details
Chromosome: 19
Transcript: ENST00000588495
Biotype: lincRNA
Gene id: ENSG00000267107
Gene Name: PCAT19
UCSC graphic:
Expression:
  Cell Line Tissue Category
HUVEC Blood Vessel Normal/Primary

miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Publication
Tissue
Cell Type
Methods
Kameswaran V et al. 2014
Pancreas
Beta cells
IP
Tested Cell Line: Beta cells
Category: -
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
19:41454443-41454471
exon
HITS-CLIP
DIRECT
LncBasev2
PDXDC2P
hsa-miR-182-5p
0.380
mTTBlnPmP
IP

Gene Details
Chromosome: 16
Transcript: ENST00000531894
Biotype: processed_transcript
Gene id: ENSG00000196696
Gene Name: PDXDC2P
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary

miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Publication
Tissue
Cell Type
Methods
Kameswaran V et al. 2014
Pancreas
Beta cells
IP
Tested Cell Line: Beta cells
Category: -
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
16:69982355-69982383
exon
HITS-CLIP
DIRECT
LncBasev2
PRSS3P1
hsa-miR-182-5p
-
mTTBlnPmP
IP

Gene Details
Chromosome: 7
Transcript: ENST00000503996
Biotype: unprocessed_pseudogene
Gene id: ENSG00000250591
Gene Name: PRSS3P1
UCSC graphic:
Expression: -

miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Publication
Tissue
Cell Type
Methods
Kameswaran V et al. 2014
Pancreas
Beta cells
IP
Tested Cell Line: Beta cells
Category: -
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
7:142763911-142763939
exon
HITS-CLIP
DIRECT
LncBasev2
RAC1P2
hsa-miR-182-5p
-
mTTBlnPmP
IP

Gene Details
Chromosome: 4
Transcript: ENST00000511164
Biotype: processed_pseudogene
Gene id: ENSG00000249936
Gene Name: RAC1P2
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant

miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Publication
Tissue
Cell Type
Methods
Kameswaran V et al. 2014
Pancreas
Beta cells
IP
Tested Cell Line: Beta cells
Category: -
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
4:46724280-46724308
exon
HITS-CLIP
DIRECT
LncBasev2
RANP1
hsa-miR-182-5p
-
mTTBlnPmP
IP

Gene Details
Chromosome: 6
Transcript: ENST00000455094
Biotype: processed_pseudogene
Gene id: ENSG00000236603
Gene Name: RANP1
UCSC graphic:
Expression: -

miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Publication
Tissue
Cell Type
Methods
Whisnant Adam W et al. 2013
Cervix
TZMBL
IP
Tested Cell Line: TZMBL
Category: Cancer/Malignant
Experimental Condition: shRNAs against HIV-1
Location
Region
Method
Result
Validation Type
Source
6:30486367-30486395
exon
HITS-CLIP
DIRECT
LncBasev2
RGS17P1
hsa-miR-182-5p
-
mTTBlnPmP
IP

Gene Details
Chromosome: 13
Transcript: ENST00000423358
Biotype: processed_pseudogene
Gene id: ENSG00000229473
Gene Name: RGS17P1
UCSC graphic:
Expression:
  Cell Line Tissue Category
LCLBACD2 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD3 - Normal/Primary

miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Publication
Tissue
Cell Type
Methods
Kameswaran V et al. 2014
Pancreas
Beta cells
IP
Tested Cell Line: Beta cells
Category: -
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
13:40993121-40993149
exon
HITS-CLIP
DIRECT
LncBasev2
RNASEK-C17orf49
hsa-miR-182-5p
0.470
mTTBlnPmP
IP

Gene Details
Chromosome: 17
Transcript: NR_037717.1
Biotype: sense
Gene id: NR_037717.1 (gene)
Gene Name: RNASEK-C17orf49
UCSC graphic: -
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HREpiC Kidney Normal/Primary

miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Publication
Tissue
Cell Type
Methods
Hafner M. et al. 2010
Kidney
HEK293
IP
Tested Cell Line: HEK293
Category: Embryonic/Fetal
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
17:7014220-7014248
exon
PAR-CLIP
DIRECT
LncBasev2
Whisnant Adam W et al. 2013
Cervix
TZMBL
IP
Tested Cell Line: TZMBL
Category: Cancer/Malignant
Experimental Condition: shRNs against HIV-1
Location
Region
Method
Result
Validation Type
Source
17:7014220-7014248
exon
HITS-CLIP
DIRECT
LncBasev2
RP11-1018J11.1
hsa-miR-182-5p
-
mTTBlnPmP
IP

Gene Details
Chromosome: 12
Transcript: ENST00000444513
Biotype: processed_pseudogene
Gene id: ENSG00000256211
Gene Name: RP11-1018J11.1
UCSC graphic:
Expression: -

miRNA Details
Name: hsa-miR-182-5p
Sequence: uuuggcaaugguagaacucacacu
MirBase ID: MIMAT0000259
Related Diseases:

Publication
Tissue
Cell Type
Methods
Kameswaran V et al. 2014
Pancreas
Beta cells
IP
Tested Cell Line: Beta cells
Category: -
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
12:16989472-16989500
exon
HITS-CLIP
DIRECT
LncBasev2
Funded by:
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