LncBase Experimental v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-181a-5p


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Go to Predicted module
Filters
Gene
miRNA
Pr. score
DIANA Links
Methods
LINC-PINT
hsa-miR-181a-5p
0.696
mTTBlnPmP
IP

Gene Details
Chromosome: 7
Transcript: NR_015431.1
Biotype: lincRNA
Gene id: NR_015431.1 (gene)
Gene Name: LINC-PINT
UCSC graphic: -
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary

miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Publication
Tissue
Cell Type
Methods
Boudreau RL et al. 2014
Brain
-
IP
Tested Cell Line: -
Category: -
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
7:130944480-130944508
exon
HITS-CLIP
DIRECT
LncBasev2
LL22NC03-80A10.6
hsa-miR-181a-5p
-
mTTBlnPmP
IP

Gene Details
Chromosome: 22
Transcript: ENST00000413293
Biotype: transcribed_unprocessed_pseudogene
Gene id: ENSG00000272779
Gene Name: LL22NC03-80A10.6
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
HMEpC Mammary Gland Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
LCLBACD1 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary

miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Publication
Tissue
Cell Type
Methods
Boudreau RL et al. 2014
Brain
-
IP
Tested Cell Line: -
Category: -
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
22:22309715-22309743
exon
HITS-CLIP
DIRECT
LncBasev2
Kameswaran V et al. 2014
Pancreas
Beta cells
IP
Tested Cell Line: Beta cells
Category: -
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
22:22306903-22306931
exon
HITS-CLIP
DIRECT
LncBasev2
LLNLF-187D8.1
hsa-miR-181a-5p
0.644
mTTBlnPmP
IP

Gene Details
Chromosome: 19
Transcript: ENST00000617053
Biotype: lincRNA
Gene id: ENSG00000277531
Gene Name: LLNLF-187D8.1
UCSC graphic:
Expression: -

miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Publication
Tissue
Cell Type
Methods
Boudreau RL et al. 2014
Brain
-
IP
Tested Cell Line: -
Category: -
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
19:46424839-46424867
exon
HITS-CLIP
DIRECT
LncBasev2
LOC100129034
hsa-miR-181a-5p
0.401
mTTBlnPmP
IP

Gene Details
Chromosome: 9
Transcript: NR_027406.1
Biotype: antisense
Gene id: NR_027406.1 (gene)
Gene Name: LOC100129034
UCSC graphic: -
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD1 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBAC - Normal/Primary

miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Publication
Tissue
Cell Type
Methods
Pillai MM et al. 2014
Mammary Gland
MCF7
IP
Tested Cell Line: MCF7
Category: Cancer/Malignant
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
9:124357386-124357414
exon
HITS-CLIP
DIRECT
LncBasev2
Skalsky Rebecca L. et al. 2012
EF3DAGO2
IP
Tested Cell Line: EF3DAGO2
Category: Normal/Primary
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
9:124357386-124357414
exon
PAR-CLIP
DIRECT
LncBasev2
LOC100505761
hsa-miR-181a-5p
0.397
mTTBlnPmP
IP

Gene Details
Chromosome: 10
Transcript: NR_038938.1
Biotype: antisense
Gene id: NR_038938.1 (gene)
Gene Name: LOC100505761
UCSC graphic: -
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD2 - Normal/Primary

miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Publication
Tissue
Cell Type
Methods
Pillai MM et al. 2014
Mammary Gland
MCF7
IP
Tested Cell Line: MCF7
Category: Cancer/Malignant
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
10:102455843-102455871
exon
HITS-CLIP
DIRECT
LncBasev2
LOC100506100
hsa-miR-181a-5p
0.487
mTTBlnPmP
IP

Gene Details
Chromosome: 9
Transcript: NR_046240.1
Biotype: antisense
Gene id: NR_046240.1 (gene)
Gene Name: LOC100506100
UCSC graphic: -
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD2 - Normal/Primary

miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Publication
Tissue
Cell Type
Methods
Whisnant Adam W et al. 2013
Cervix
TZMBL
IP
Tested Cell Line: TZMBL
Category: Cancer/Malignant
Experimental Condition: shRNs against HIV-1
Location
Region
Method
Result
Validation Type
Source
9:128733031-128733059
exon
HITS-CLIP
DIRECT
LncBasev2
LOC100507217
hsa-miR-181a-5p
-
mTTBlnPmP
IP

Gene Details
Chromosome: 15
Transcript: NR_037602.1
Biotype: lincRNA
Gene id: NR_037602.1 (gene)
Gene Name: LOC100507217
UCSC graphic: -
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
HeLa Cervix Cancer/Malignant
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary

miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Publication
Tissue
Cell Type
Methods
Boudreau RL et al. 2014
Brain
-
IP
Tested Cell Line: -
Category: -
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
15:92898109-92898137
exon
HITS-CLIP
DIRECT
LncBasev2
LOC100507472
hsa-miR-181a-5p
0.368
mTTBlnPmP
IP

Gene Details
Chromosome: 15
Transcript: NR_045387.1
Biotype: sense
Gene id: NR_045387.1 (gene)
Gene Name: LOC100507472
UCSC graphic: -
Expression: -

miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Publication
Tissue
Cell Type
Methods
Karginov FV et al. 2013
Kidney
293S
IP
Tested Cell Line: 293S
Category: Embryonic/Fetal
Experimental Condition: no treatment (control)
Location
Region
Method
Result
Validation Type
Source
15:101308758-101308786
exon
HITS-CLIP
DIRECT
LncBasev2
LOC113230
hsa-miR-181a-5p
-
mTTBlnPmP
IP

Gene Details
Chromosome: 19
Transcript: NR_024282.1
Biotype: sense
Gene id: NR_024282.1 (gene)
Gene Name: LOC113230
UCSC graphic: -
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant

miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Publication
Tissue
Cell Type
Methods
Pillai MM et al. 2014
Mammary Gland
MCF7
IP
Tested Cell Line: MCF7
Category: Cancer/Malignant
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
19:14074963-14074991
exon
HITS-CLIP
DIRECT
LncBasev2
LOC388692
hsa-miR-181a-5p
0.513
mTTBlnPmP
IP

Gene Details
Chromosome: 1
Transcript: NR_027002.1
Biotype: lincRNA
Gene id: NR_027002.1 (gene)
Gene Name: LOC388692
UCSC graphic: -
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant

miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Publication
Tissue
Cell Type
Methods
Kameswaran V et al. 2014
Pancreas
Beta cells
IP
Tested Cell Line: Beta cells
Category: -
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
1:143787020-143787048
exon
HITS-CLIP
DIRECT
LncBasev2
LOC646719
hsa-miR-181a-5p
0.521
mTTBlnPmP
IP

Gene Details
Chromosome: 5
Transcript: NR_046262.1
Biotype: lincRNA
Gene id: NR_046262.1 (gene)
Gene Name: LOC646719
UCSC graphic: -
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBAC - Normal/Primary

miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Publication
Tissue
Cell Type
Methods
Boudreau RL et al. 2014
Brain
-
IP
Tested Cell Line: -
Category: -
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
5:36871650-36871678
exon
HITS-CLIP
DIRECT
LncBasev2
LOC90784
hsa-miR-181a-5p
0.402
mTTBlnPmP
IP

Gene Details
Chromosome: 2
Transcript: NR_026984.1
Biotype: sense
Gene id: NR_026984.1 (gene)
Gene Name: LOC90784
UCSC graphic: -
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary

miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Publication
Tissue
Cell Type
Methods
Pillai MM et al. 2014
Mammary Gland
MCF7
IP
Tested Cell Line: MCF7
Category: Cancer/Malignant
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
2:86021059-86021087
exon
HITS-CLIP
DIRECT
LncBasev2
MAGI2-AS3
hsa-miR-181a-5p
0.708
mTTBlnPmP
IP

Gene Details
Chromosome: 7
Transcript: ENST00000621901
Biotype: antisense
Gene id: ENSG00000234456
Gene Name: MAGI2-AS3
UCSC graphic:
Expression:
  Cell Line Tissue Category
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
HMEpC Mammary Gland Normal/Primary

miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Publication
Tissue
Cell Type
Methods
Boudreau RL et al. 2014
Brain
-
IP
Tested Cell Line: -
Category: -
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
7:79459096-79459124
exon
HITS-CLIP
DIRECT
LncBasev2
MAGI2-AS3
hsa-miR-181a-5p
0.668
mTTBlnPmP
IP

Gene Details
Chromosome: 7
Transcript: ENST00000452320
Biotype: retained_intron
Gene id: ENSG00000234456
Gene Name: MAGI2-AS3
UCSC graphic:
Expression:
  Cell Line Tissue Category
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
HMEpC Mammary Gland Normal/Primary

miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Publication
Tissue
Cell Type
Methods
Boudreau RL et al. 2014
Brain
-
IP
Tested Cell Line: -
Category: -
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
7:79466788-79466816
exon
HITS-CLIP
DIRECT
LncBasev2
MALAT1
hsa-miR-181a-5p
0.735
mTTBlnPmP
IP

Gene Details
Chromosome: 11
Transcript: ENST00000534336
Biotype: lincRNA
Gene id: ENSG00000251562
Gene Name: MALAT1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
HMEpC Mammary Gland Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD3 - Normal/Primary

miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Publication
Tissue
Cell Type
Methods
Karginov FV et al. 2013
Kidney
293S
IP
Tested Cell Line: 293S
Category: Embryonic/Fetal
Experimental Condition: treatment:hippuristanol
Location
Region
Method
Result
Validation Type
Source
11:65501543-65501571
exon
HITS-CLIP
DIRECT
LncBasev2
11:65503075-65503103
exon
HITS-CLIP
DIRECT
LncBasev2
11:65502981-65503009
exon
HITS-CLIP
DIRECT
LncBasev2
11:65501168-65501196
exon
HITS-CLIP
DIRECT
LncBasev2
11:65502552-65502580
exon
HITS-CLIP
DIRECT
LncBasev2
11:65503763-65503791
exon
HITS-CLIP
DIRECT
LncBasev2
11:65501543-65501571
exon
HITS-CLIP
DIRECT
LncBasev2
11:65502552-65502580
exon
HITS-CLIP
DIRECT
LncBasev2
11:65503075-65503103
exon
HITS-CLIP
DIRECT
LncBasev2
11:65501543-65501571
exon
HITS-CLIP
DIRECT
LncBasev2
11:65503763-65503791
exon
HITS-CLIP
DIRECT
LncBasev2
11:65501766-65501794
exon
HITS-CLIP
DIRECT
LncBasev2
11:65502552-65502580
exon
HITS-CLIP
DIRECT
LncBasev2
11:65501766-65501794
exon
HITS-CLIP
DIRECT
LncBasev2
11:65501168-65501196
exon
HITS-CLIP
DIRECT
LncBasev2
11:65501543-65501571
exon
HITS-CLIP
DIRECT
LncBasev2
11:65503763-65503791
exon
HITS-CLIP
DIRECT
LncBasev2
11:65504035-65504063
exon
HITS-CLIP
DIRECT
LncBasev2
11:65503075-65503103
exon
HITS-CLIP
DIRECT
LncBasev2
11:65502981-65503009
exon
HITS-CLIP
DIRECT
LncBasev2
11:65503197-65503225
exon
HITS-CLIP
DIRECT
LncBasev2
11:65502981-65503009
exon
HITS-CLIP
DIRECT
LncBasev2
11:65503075-65503103
exon
HITS-CLIP
DIRECT
LncBasev2
11:65504035-65504063
exon
HITS-CLIP
DIRECT
LncBasev2
11:65502552-65502580
exon
HITS-CLIP
DIRECT
LncBasev2
11:65501766-65501794
exon
HITS-CLIP
DIRECT
LncBasev2
11:65503197-65503225
exon
HITS-CLIP
DIRECT
LncBasev2
11:65501543-65501571
exon
HITS-CLIP
DIRECT
LncBasev2
11:65503763-65503791
exon
HITS-CLIP
DIRECT
LncBasev2
11:65501168-65501196
exon
HITS-CLIP
DIRECT
LncBasev2
11:65503995-65504023
exon
HITS-CLIP
DIRECT
LncBasev2
11:65503763-65503791
exon
HITS-CLIP
DIRECT
LncBasev2
11:65502552-65502580
exon
HITS-CLIP
DIRECT
LncBasev2
11:65501168-65501196
exon
HITS-CLIP
DIRECT
LncBasev2
11:65503075-65503103
exon
HITS-CLIP
DIRECT
LncBasev2
11:65501766-65501794
exon
HITS-CLIP
DIRECT
LncBasev2
Pillai MM et al. 2014
Mammary Gland
MCF7
IP
Tested Cell Line: MCF7
Category: Cancer/Malignant
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
11:65502981-65503009
exon
HITS-CLIP
DIRECT
LncBasev2
11:65502552-65502580
exon
HITS-CLIP
DIRECT
LncBasev2
11:65501766-65501794
exon
HITS-CLIP
DIRECT
LncBasev2
11:65503197-65503225
exon
HITS-CLIP
DIRECT
LncBasev2
11:65501543-65501571
exon
HITS-CLIP
DIRECT
LncBasev2
11:65503075-65503103
exon
HITS-CLIP
DIRECT
LncBasev2
11:65501168-65501196
exon
HITS-CLIP
DIRECT
LncBasev2
11:65501072-65501100
exon
HITS-CLIP
DIRECT
LncBasev2
11:65503763-65503791
exon
HITS-CLIP
DIRECT
LncBasev2
11:65501766-65501794
exon
HITS-CLIP
DIRECT
LncBasev2
11:65503075-65503103
exon
HITS-CLIP
DIRECT
LncBasev2
11:65503763-65503791
exon
HITS-CLIP
DIRECT
LncBasev2
11:65503197-65503225
exon
HITS-CLIP
DIRECT
LncBasev2
Balakrishnan I et al. 2014
Umbilical vein
HUVEC
IP
Tested Cell Line: HUVEC
Category: Normal/Primary
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
11:65503763-65503791
exon
HITS-CLIP
DIRECT
LncBasev2
11:65501766-65501794
exon
HITS-CLIP
DIRECT
LncBasev2
11:65503075-65503103
exon
HITS-CLIP
DIRECT
LncBasev2
11:65503197-65503225
exon
HITS-CLIP
DIRECT
LncBasev2
11:65501543-65501571
exon
HITS-CLIP
DIRECT
LncBasev2
11:65501072-65501100
exon
HITS-CLIP
DIRECT
LncBasev2
11:65501766-65501794
exon
HITS-CLIP
DIRECT
LncBasev2
11:65503075-65503103
exon
HITS-CLIP
DIRECT
LncBasev2
11:65502552-65502580
exon
HITS-CLIP
DIRECT
LncBasev2
11:65501766-65501794
exon
HITS-CLIP
DIRECT
LncBasev2
11:65501072-65501100
exon
HITS-CLIP
DIRECT
LncBasev2
11:65503197-65503225
exon
HITS-CLIP
DIRECT
LncBasev2
11:65501168-65501196
exon
HITS-CLIP
DIRECT
LncBasev2
11:65501766-65501794
exon
HITS-CLIP
DIRECT
LncBasev2
11:65503763-65503791
exon
HITS-CLIP
DIRECT
LncBasev2
Haecker Irina et al. 2012
Bone Marrow
BCBL1
IP
Tested Cell Line: BCBL1
Category: Cancer/Malignant
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
11:65501072-65501100
exon
HITS-CLIP
DIRECT
LncBasev2
11:65502981-65503009
exon
HITS-CLIP
DIRECT
LncBasev2
11:65503197-65503225
exon
HITS-CLIP
DIRECT
LncBasev2
11:65503075-65503103
exon
HITS-CLIP
DIRECT
LncBasev2
11:65501168-65501196
exon
HITS-CLIP
DIRECT
LncBasev2
11:65502552-65502580
exon
HITS-CLIP
DIRECT
LncBasev2
11:65503197-65503225
exon
HITS-CLIP
DIRECT
LncBasev2
MEG3
hsa-miR-181a-5p
0.637
mTTBlnPmP
IP

Gene Details
Chromosome: 14
Transcript: ENST00000522771
Biotype: lincRNA
Gene id: ENSG00000214548
Gene Name: MEG3
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
HREpiC Kidney Normal/Primary
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant

miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Publication
Tissue
Cell Type
Methods
Kameswaran V et al. 2014
Pancreas
Beta cells
IP
Tested Cell Line: Beta cells
Category: -
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
14:100830141-100830169
exon
HITS-CLIP
DIRECT
LncBasev2
Boudreau RL et al. 2014
Brain
-
IP
Tested Cell Line: -
Category: -
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
14:100846512-100846540
exon
HITS-CLIP
DIRECT
LncBasev2
14:100831088-100831116
exon
HITS-CLIP
DIRECT
LncBasev2
MFI2-AS1
hsa-miR-181a-5p
-
mTTBlnPmP
IP

Gene Details
Chromosome: 3
Transcript: ENST00000415244
Biotype: antisense
Gene id: ENSG00000228109
Gene Name: MFI2-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant

miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Publication
Tissue
Cell Type
Methods
Boudreau RL et al. 2014
Brain
-
IP
Tested Cell Line: -
Category: -
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
3:197004724-197004752
exon
HITS-CLIP
DIRECT
LncBasev2
MIAT
hsa-miR-181a-5p
0.812
mTTBlnPmP
IP

Gene Details
Chromosome: 22
Transcript: ENST00000613780
Biotype: lincRNA
Gene id: ENSG00000225783
Gene Name: MIAT
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
GM12878 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
A549 Lung Cancer/Malignant
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary

miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Publication
Tissue
Cell Type
Methods
Boudreau RL et al. 2014
Brain
-
IP
Tested Cell Line: -
Category: -
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
22:26676396-26676424
exon
HITS-CLIP
DIRECT
LncBasev2
MIR124-2HG
hsa-miR-181a-5p
0.431
mTTBlnPmP
IP

Gene Details
Chromosome: 8
Transcript: ENST00000521441
Biotype: lincRNA
Gene id: ENSG00000254377
Gene Name: MIR124-2HG
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary

miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Publication
Tissue
Cell Type
Methods
Boudreau RL et al. 2014
Brain
-
IP
Tested Cell Line: -
Category: -
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
8:64383446-64383474
exon
HITS-CLIP
DIRECT
LncBasev2
MIR17HG
hsa-miR-181a-5p
0.462
mTTBlnPmP
IP

Gene Details
Chromosome: 13
Transcript: ENST00000582141
Biotype: retained_intron
Gene id: ENSG00000215417
Gene Name: MIR17HG
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary

miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Publication
Tissue
Cell Type
Methods
Karginov FV et al. 2013
Kidney
293S
IP
Tested Cell Line: 293S
Category: Embryonic/Fetal
Experimental Condition: treatment:hippuristanol
Location
Region
Method
Result
Validation Type
Source
13:91350165-91350193
exon
HITS-CLIP
DIRECT
LncBasev2
13:91350165-91350193
exon
HITS-CLIP
DIRECT
LncBasev2
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