LncBase Experimental v.2
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Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-155-5p


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Go to Predicted module
Filters
Gene
miRNA
Pr. score
DIANA Links
Methods
MALAT1
hsa-miR-155-5p
0.671
mTTBlnPmP
IP

Gene Details
Chromosome: 11
Transcript: ENST00000534336
Biotype: lincRNA
Gene id: ENSG00000251562
Gene Name: MALAT1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
HMEpC Mammary Gland Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD3 - Normal/Primary

miRNA Details
Name: hsa-miR-155-5p
Sequence: uuaaugcuaaucgugauaggggu
MirBase ID: MIMAT0000646
Related Diseases:

Publication
Tissue
Cell Type
Methods
Balakrishnan I et al. 2014
Bone Marrow
HS27a
IP
Tested Cell Line: HS27a
Category: Normal/Primary
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
11:65502190-65502218
exon
HITS-CLIP
DIRECT
LncBasev2
11:65502190-65502218
exon
HITS-CLIP
DIRECT
LncBasev2
11:65502072-65502100
exon
HITS-CLIP
DIRECT
LncBasev2
11:65502190-65502218
exon
HITS-CLIP
DIRECT
LncBasev2
11:65503563-65503591
exon
HITS-CLIP
DIRECT
LncBasev2
Eva Gottwein et al. 2011
Pleura
BC3
IP
Tested Cell Line: BC3
Category: Cancer/Malignant
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
11:65500354-65500382
exon
PAR-CLIP
DIRECT
LncBasev2
Haecker Irina et al. 2012
Bone Marrow
BCBL1
IP
Tested Cell Line: BCBL1
Category: Cancer/Malignant
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
11:65502190-65502218
exon
HITS-CLIP
DIRECT
LncBasev2
11:65502072-65502100
exon
HITS-CLIP
DIRECT
LncBasev2
MAP3K14-AS1
hsa-miR-155-5p
0.406
mTTBlnPmP
IP

Gene Details
Chromosome: 17
Transcript: ENST00000590100
Biotype: antisense
Gene id: ENSG00000267278
Gene Name: MAP3K14-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD3 - Normal/Primary

miRNA Details
Name: hsa-miR-155-5p
Sequence: uuaaugcuaaucgugauaggggu
MirBase ID: MIMAT0000646
Related Diseases:

Publication
Tissue
Cell Type
Methods
Eva Gottwein et al. 2011
Pleura
BC3
IP
Tested Cell Line: BC3
Category: Cancer/Malignant
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
17:45268559-45268587
exon
PAR-CLIP
DIRECT
LncBasev2
MTND2P28
hsa-miR-155-5p
-
mTTBlnPmP
IP

Gene Details
Chromosome: 1
Transcript: ENST00000457540
Biotype: unprocessed_pseudogene
Gene id: ENSG00000225630
Gene Name: MTND2P28
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary

miRNA Details
Name: hsa-miR-155-5p
Sequence: uuaaugcuaaucgugauaggggu
MirBase ID: MIMAT0000646
Related Diseases:

Publication
Tissue
Cell Type
Methods
Xue Y et al. 2013
Cervix
HELA
IP
Tested Cell Line: HELA
Category: Cancer/Malignant
Experimental Condition: Hela cells were treated with control shRNA.
Location
Region
Method
Result
Validation Type
Source
1:629900-629952
exon
HITS-CLIP
DIRECT
LncBasev2
Haecker Irina et al. 2012
Bone Marrow
BCBL1
IP
Tested Cell Line: BCBL1
Category: Cancer/Malignant
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
1:629924-629952
exon
HITS-CLIP
DIRECT
LncBasev2
MTND5P15
hsa-miR-155-5p
-
mTTBlnPmP
IP

Gene Details
Chromosome: 3
Transcript: ENST00000434246
Biotype: processed_pseudogene
Gene id: ENSG00000231888
Gene Name: MTND5P15
UCSC graphic:
Expression: -

miRNA Details
Name: hsa-miR-155-5p
Sequence: uuaaugcuaaucgugauaggggu
MirBase ID: MIMAT0000646
Related Diseases:

Publication
Tissue
Cell Type
Methods
Skalsky Rebecca L. et al. 2012
LCL35
IP
Tested Cell Line: LCL35
Category: Normal/Primary
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
3:177010747-177010775
exon
PAR-CLIP
DIRECT
LncBasev2
NEAT1
hsa-miR-155-5p
0.441
mTTBlnPmP
IP

Gene Details
Chromosome: 11
Transcript: ENST00000501122
Biotype: lincRNA
Gene id: ENSG00000245532
Gene Name: NEAT1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary

miRNA Details
Name: hsa-miR-155-5p
Sequence: uuaaugcuaaucgugauaggggu
MirBase ID: MIMAT0000646
Related Diseases:

Publication
Tissue
Cell Type
Methods
Balakrishnan I et al. 2014
Bone Marrow
HMSC
IP
Tested Cell Line: HMSC
Category: Stem/Progenitor
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
11:65437677-65437705
exon
HITS-CLIP
DIRECT
LncBasev2
11:65437677-65437705
exon
HITS-CLIP
DIRECT
LncBasev2
PNPT1P1
hsa-miR-155-5p
-
mTTBlnPmP
IP

Gene Details
Chromosome: 3
Transcript: ENST00000450418
Biotype: processed_pseudogene
Gene id: ENSG00000229241
Gene Name: PNPT1P1
UCSC graphic:
Expression: -

miRNA Details
Name: hsa-miR-155-5p
Sequence: uuaaugcuaaucgugauaggggu
MirBase ID: MIMAT0000646
Related Diseases:

Publication
Tissue
Cell Type
Methods
Haecker Irina et al. 2012
Pleura
BC3
IP
Tested Cell Line: BC3
Category: Cancer/Malignant
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
3:3982653-3982681
exon
HITS-CLIP
DIRECT
LncBasev2
3:3982653-3982681
exon
HITS-CLIP
DIRECT
LncBasev2
RP11-175O19.4
hsa-miR-155-5p
0.904
mTTBlnPmP
IP

Gene Details
Chromosome: 10
Transcript: ENST00000421806
Biotype: antisense
Gene id: ENSG00000231025
Gene Name: RP11-175O19.4
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant

miRNA Details
Name: hsa-miR-155-5p
Sequence: uuaaugcuaaucgugauaggggu
MirBase ID: MIMAT0000646
Related Diseases:

Publication
Tissue
Cell Type
Methods
Skalsky Rebecca L. et al. 2012
LCLBAC
IP
Tested Cell Line: LCLBAC
Category: Normal/Primary
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
10:96994442-96994470
exon
PAR-CLIP
DIRECT
LncBasev2
10:96994902-96994930
exon
PAR-CLIP
DIRECT
LncBasev2
10:96994902-96994930
exon
PAR-CLIP
DIRECT
LncBasev2
10:96994902-96994930
exon
PAR-CLIP
DIRECT
LncBasev2
10:96994902-96994930
exon
PAR-CLIP
DIRECT
LncBasev2
10:96994902-96994930
exon
PAR-CLIP
DIRECT
LncBasev2
Eva Gottwein et al. 2011
Pleura
BC3
IP
Tested Cell Line: BC3
Category: Cancer/Malignant
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
10:96994442-96994470
exon
PAR-CLIP
DIRECT
LncBasev2
10:96994902-96994930
exon
PAR-CLIP
DIRECT
LncBasev2
Xue Y et al. 2013
Cervix
HELA
IP
Tested Cell Line: HELA
Category: Cancer/Malignant
Experimental Condition: Hela cells were treated with control shRN.
Location
Region
Method
Result
Validation Type
Source
10:96994885-96994930
exon
HITS-CLIP
DIRECT
LncBasev2
RP11-201A3.1
hsa-miR-155-5p
0.714
mTTBlnPmP
IP

Gene Details
Chromosome: 1
Transcript: ENST00000569873
Biotype: lincRNA
Gene id: ENSG00000261182
Gene Name: RP11-201A3.1
UCSC graphic:
Expression: -

miRNA Details
Name: hsa-miR-155-5p
Sequence: uuaaugcuaaucgugauaggggu
MirBase ID: MIMAT0000646
Related Diseases:

Publication
Tissue
Cell Type
Methods
Haecker Irina et al. 2012
Bone Marrow
BCBL1
IP
Tested Cell Line: BCBL1
Category: Cancer/Malignant
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
1:188219712-188219740
exon
HITS-CLIP
DIRECT
LncBasev2
1:188219712-188219740
exon
HITS-CLIP
DIRECT
LncBasev2
RP11-215G15.5
hsa-miR-155-5p
0.397
mTTBlnPmP
IP

Gene Details
Chromosome: 5
Transcript: ENST00000607560
Biotype: lincRNA
Gene id: ENSG00000272016
Gene Name: RP11-215G15.5
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
LCLBACD1 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBAC - Normal/Primary

miRNA Details
Name: hsa-miR-155-5p
Sequence: uuaaugcuaaucgugauaggggu
MirBase ID: MIMAT0000646
Related Diseases:

Publication
Tissue
Cell Type
Methods
Skalsky Rebecca L. et al. 2012
LCL35
IP
Tested Cell Line: LCL35
Category: Normal/Primary
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
5:10657222-10657250
exon
PAR-CLIP
DIRECT
LncBasev2
5:10657222-10657250
exon
PAR-CLIP
DIRECT
LncBasev2
5:10657222-10657250
exon
PAR-CLIP
DIRECT
LncBasev2
5:10657222-10657250
exon
PAR-CLIP
DIRECT
LncBasev2
5:10657222-10657250
exon
PAR-CLIP
DIRECT
LncBasev2
RP11-278C7.3
hsa-miR-155-5p
0.453
mTTBlnPmP
IP

Gene Details
Chromosome: 12
Transcript: ENST00000620472
Biotype: sense_intronic
Gene id: ENSG00000274105
Gene Name: RP11-278C7.3
UCSC graphic:
Expression: -

miRNA Details
Name: hsa-miR-155-5p
Sequence: uuaaugcuaaucgugauaggggu
MirBase ID: MIMAT0000646
Related Diseases:

Publication
Tissue
Cell Type
Methods
Skalsky Rebecca L. et al. 2012
LCLBACD1
IP
Tested Cell Line: LCLBACD1
Category: Normal/Primary
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
12:32728699-32728727
exon
PAR-CLIP
DIRECT
LncBasev2
RP11-350F4.2
hsa-miR-155-5p
0.454
mTTBlnPmP
IP

Gene Details
Chromosome: 12
Transcript: ENST00000553202
Biotype: lincRNA
Gene id: ENSG00000257742
Gene Name: RP11-350F4.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary

miRNA Details
Name: hsa-miR-155-5p
Sequence: uuaaugcuaaucgugauaggggu
MirBase ID: MIMAT0000646
Related Diseases:

Publication
Tissue
Cell Type
Methods
Skalsky Rebecca L. et al. 2012
LCL35
IP
Tested Cell Line: LCL35
Category: Normal/Primary
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
12:43721071-43721099
exon
PAR-CLIP
DIRECT
LncBasev2
RP11-40C6.2
hsa-miR-155-5p
-
mTTBlnPmP
IP

Gene Details
Chromosome: 9
Transcript: ENST00000401543
Biotype: processed_pseudogene
Gene id: ENSG00000219928
Gene Name: RP11-40C6.2
UCSC graphic:
Expression: -

miRNA Details
Name: hsa-miR-155-5p
Sequence: uuaaugcuaaucgugauaggggu
MirBase ID: MIMAT0000646
Related Diseases:

Publication
Tissue
Cell Type
Methods
Balakrishnan I et al. 2014
Bone Marrow
HS27a
IP
Tested Cell Line: HS27a
Category: Normal/Primary
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
9:87525437-87525465
exon
HITS-CLIP
DIRECT
LncBasev2
9:87525437-87525465
exon
HITS-CLIP
DIRECT
LncBasev2
Haecker Irina et al. 2012
Bone Marrow
BCBL1
IP
Tested Cell Line: BCBL1
Category: Cancer/Malignant
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
9:87525437-87525465
exon
HITS-CLIP
DIRECT
LncBasev2
RP11-452N17.1
hsa-miR-155-5p
-
mTTBlnPmP
IP

Gene Details
Chromosome: 2
Transcript: ENST00000613695
Biotype: unprocessed_pseudogene
Gene id: ENSG00000277998
Gene Name: RP11-452N17.1
UCSC graphic:
Expression: -

miRNA Details
Name: hsa-miR-155-5p
Sequence: uuaaugcuaaucgugauaggggu
MirBase ID: MIMAT0000646
Related Diseases:

Publication
Tissue
Cell Type
Methods
Haecker Irina et al. 2012
Bone Marrow
BCBL1
IP
Tested Cell Line: BCBL1
Category: Cancer/Malignant
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
2:164573770-164573798
exon
HITS-CLIP
DIRECT
LncBasev2
RP11-478H16.1
hsa-miR-155-5p
-
mTTBlnPmP
IP

Gene Details
Chromosome: 1
Transcript: ENST00000423792
Biotype: processed_pseudogene
Gene id: ENSG00000237922
Gene Name: RP11-478H16.1
UCSC graphic:
Expression: -

miRNA Details
Name: hsa-miR-155-5p
Sequence: uuaaugcuaaucgugauaggggu
MirBase ID: MIMAT0000646
Related Diseases:

Publication
Tissue
Cell Type
Methods
Eva Gottwein et al. 2011
Pleura
BC3
IP
Tested Cell Line: BC3
Category: Cancer/Malignant
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
1:236286816-236286844
exon
PAR-CLIP
DIRECT
LncBasev2
RP11-592N21.1
hsa-miR-155-5p
-
mTTBlnPmP
IP

Gene Details
Chromosome: 15
Transcript: ENST00000498103
Biotype: processed_pseudogene
Gene id: ENSG00000212664
Gene Name: RP11-592N21.1
UCSC graphic:
Expression: -

miRNA Details
Name: hsa-miR-155-5p
Sequence: uuaaugcuaaucgugauaggggu
MirBase ID: MIMAT0000646
Related Diseases:

Publication
Tissue
Cell Type
Methods
Haecker Irina et al. 2012
Bone Marrow
BCBL1
IP
Tested Cell Line: BCBL1
Category: Cancer/Malignant
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
15:71341146-71341174
exon
HITS-CLIP
DIRECT
LncBasev2
RP11-693J15.4
hsa-miR-155-5p
0.544
mTTBlnPmP
IP

Gene Details
Chromosome: 12
Transcript: ENST00000508671
Biotype: antisense
Gene id: ENSG00000266923
Gene Name: RP11-693J15.4
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
LCLBACD3 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary

miRNA Details
Name: hsa-miR-155-5p
Sequence: uuaaugcuaaucgugauaggggu
MirBase ID: MIMAT0000646
Related Diseases:

Publication
Tissue
Cell Type
Methods
Skalsky Rebecca L. et al. 2012
LCL35
IP
Tested Cell Line: LCL35
Category: Normal/Primary
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
12:92482273-92482301
exon
PAR-CLIP
DIRECT
LncBasev2
RP11-693J15.5
hsa-miR-155-5p
0.681
mTTBlnPmP
IP

Gene Details
Chromosome: 12
Transcript: ENST00000504409
Biotype: lincRNA
Gene id: ENSG00000205056
Gene Name: RP11-693J15.5
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
LCLBACD1 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary

miRNA Details
Name: hsa-miR-155-5p
Sequence: uuaaugcuaaucgugauaggggu
MirBase ID: MIMAT0000646
Related Diseases:

Publication
Tissue
Cell Type
Methods
Skalsky Rebecca L. et al. 2012
LCL35
IP
Tested Cell Line: LCL35
Category: Normal/Primary
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
12:92482273-92482301
exon
PAR-CLIP
DIRECT
LncBasev2
RP11-731C17.2
hsa-miR-155-5p
0.516
mTTBlnPmP
IP

Gene Details
Chromosome: 3
Transcript: ENST00000609553
Biotype: antisense
Gene id: ENSG00000273486
Gene Name: RP11-731C17.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant

miRNA Details
Name: hsa-miR-155-5p
Sequence: uuaaugcuaaucgugauaggggu
MirBase ID: MIMAT0000646
Related Diseases:

Publication
Tissue
Cell Type
Methods
Eva Gottwein et al. 2011
Pleura
BC3
IP
Tested Cell Line: BC3
Category: Cancer/Malignant
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
3:136838473-136838501
exon
PAR-CLIP
DIRECT
LncBasev2
RP3-368A4.5
hsa-miR-155-5p
0.362
mTTBlnPmP
IP

Gene Details
Chromosome: X
Transcript: ENST00000603037
Biotype: sense_intronic
Gene id: ENSG00000271430
Gene Name: RP3-368A4.5
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary

miRNA Details
Name: hsa-miR-155-5p
Sequence: uuaaugcuaaucgugauaggggu
MirBase ID: MIMAT0000646
Related Diseases:

Publication
Tissue
Cell Type
Methods
Skalsky Rebecca L. et al. 2012
EF3DAGO2
IP
Tested Cell Line: EF3DAGO2
Category: Normal/Primary
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
X:74202675-74202703
exon
PAR-CLIP
DIRECT
LncBasev2
RP4-612B15.2
hsa-miR-155-5p
-
mTTBlnPmP
IP

Gene Details
Chromosome: 1
Transcript: ENST00000447415
Biotype: processed_pseudogene
Gene id: ENSG00000230721
Gene Name: RP4-612B15.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary

miRNA Details
Name: hsa-miR-155-5p
Sequence: uuaaugcuaaucgugauaggggu
MirBase ID: MIMAT0000646
Related Diseases:

Publication
Tissue
Cell Type
Methods
Haecker Irina et al. 2012
Pleura
BC3
IP
Tested Cell Line: BC3
Category: Cancer/Malignant
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
1:86785451-86785479
exon
HITS-CLIP
DIRECT
LncBasev2
1:86785451-86785479
exon
HITS-CLIP
DIRECT
LncBasev2
Funded by:
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