LncBase Experimental v.2
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Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-146a-5p


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Go to Predicted module
Filters
Gene
miRNA
Pr. score
DIANA Links
Methods
RP11-697E2.9
hsa-miR-146a-5p
-
mTTBlnPmP
IP

Gene Details
Chromosome: 15
Transcript: ENST00000605689
Biotype: processed_pseudogene
Gene id: ENSG00000271396
Gene Name: RP11-697E2.9
UCSC graphic:
Expression: -

miRNA Details
Name: hsa-miR-146a-5p
Sequence: ugagaacugaauuccauggguu
MirBase ID: MIMAT0000449
Related Diseases:

Publication
Tissue
Cell Type
Methods
Karginov FV et al. 2013
Kidney
293S
IP
Tested Cell Line: 293S
Category: Embryonic/Fetal
Experimental Condition: treatment:emetine
Location
Region
Method
Result
Validation Type
Source
15:90284470-90284498
exon
HITS-CLIP
DIRECT
LncBasev2
RP11-767N6.7
hsa-miR-146a-5p
0.407
mTTBlnPmP
IP

Gene Details
Chromosome: 1
Transcript: ENST00000430643
Biotype: sense_intronic
Gene id: ENSG00000230896
Gene Name: RP11-767N6.7
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
A549 Lung Cancer/Malignant

miRNA Details
Name: hsa-miR-146a-5p
Sequence: ugagaacugaauuccauggguu
MirBase ID: MIMAT0000449
Related Diseases:

Publication
Tissue
Cell Type
Methods
Eva Gottwein et al. 2011
Pleura
BC1
IP
Tested Cell Line: BC1
Category: Cancer/Malignant
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
1:45696964-45696992
exon
PAR-CLIP
DIRECT
LncBasev2
RP1-5O6.6
hsa-miR-146a-5p
0.643
mTTBlnPmP
IP

Gene Details
Chromosome: 22
Transcript: ENST00000624867
Biotype: sense_intronic
Gene id: ENSG00000279038
Gene Name: RP1-5O6.6
UCSC graphic:
Expression: -

miRNA Details
Name: hsa-miR-146a-5p
Sequence: ugagaacugaauuccauggguu
MirBase ID: MIMAT0000449
Related Diseases:

Publication
Tissue
Cell Type
Methods
Karginov FV et al. 2013
Kidney
293S
IP
Tested Cell Line: 293S
Category: Embryonic/Fetal
Experimental Condition: no treatment (control)
Location
Region
Method
Result
Validation Type
Source
22:38261006-38261034
exon
HITS-CLIP
DIRECT
LncBasev2
RP5-1057I20.6
hsa-miR-146a-5p
0.469
mTTBlnPmP
IP

Gene Details
Chromosome: 12
Transcript: ENST00000614749
Biotype: sense_intronic
Gene id: ENSG00000274737
Gene Name: RP5-1057I20.6
UCSC graphic:
Expression: -

miRNA Details
Name: hsa-miR-146a-5p
Sequence: ugagaacugaauuccauggguu
MirBase ID: MIMAT0000449
Related Diseases:

Publication
Tissue
Cell Type
Methods
Karginov FV et al. 2013
Kidney
293S
IP
Tested Cell Line: 293S
Category: Embryonic/Fetal
Experimental Condition: no treatment (control)
Location
Region
Method
Result
Validation Type
Source
12:47817905-47817933
exon
HITS-CLIP
DIRECT
LncBasev2
RPL39P3
hsa-miR-146a-5p
-
mTTBlnPmP
IP

Gene Details
Chromosome: 6
Transcript: ENST00000424573
Biotype: processed_pseudogene
Gene id: ENSG00000235174
Gene Name: RPL39P3
UCSC graphic:
Expression:
  Cell Line Tissue Category
MCF7 Mammary Gland Cancer/Malignant
LCLBACD1 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBAC - Normal/Primary

miRNA Details
Name: hsa-miR-146a-5p
Sequence: ugagaacugaauuccauggguu
MirBase ID: MIMAT0000449
Related Diseases:

Publication
Tissue
Cell Type
Methods
Karginov FV et al. 2013
Kidney
293S
IP
Tested Cell Line: 293S
Category: Embryonic/Fetal
Experimental Condition: no treatment (control)
Location
Region
Method
Result
Validation Type
Source
6:73373253-73373281
exon
HITS-CLIP
DIRECT
LncBasev2
Haecker Irina et al. 2012
Bone Marrow
BCBL1
IP
Tested Cell Line: BCBL1
Category: Cancer/Malignant
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
6:73373253-73373281
exon
HITS-CLIP
DIRECT
LncBasev2
Balakrishnan I et al. 2014
Bone Marrow
HS5
IP
Tested Cell Line: HS5
Category: Normal/Primary
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
6:73373253-73373281
exon
HITS-CLIP
DIRECT
LncBasev2
RPS28P7
hsa-miR-146a-5p
-
mTTBlnPmP
IP

Gene Details
Chromosome: 11
Transcript: ENST00000473748
Biotype: processed_pseudogene
Gene id: ENSG00000227097
Gene Name: RPS28P7
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary

miRNA Details
Name: hsa-miR-146a-5p
Sequence: ugagaacugaauuccauggguu
MirBase ID: MIMAT0000449
Related Diseases:

Publication
Tissue
Cell Type
Methods
Balakrishnan I et al. 2014
Bone Marrow
HS27a
IP
Tested Cell Line: HS27a
Category: Normal/Primary
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
11:82689601-82689629
exon
HITS-CLIP
DIRECT
LncBasev2
11:82689601-82689629
exon
HITS-CLIP
DIRECT
LncBasev2
Haecker Irina et al. 2012
Bone Marrow
BCBL1
IP
Tested Cell Line: BCBL1
Category: Cancer/Malignant
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
11:82689601-82689629
exon
HITS-CLIP
DIRECT
LncBasev2
SERF2-C15ORF63
hsa-miR-146a-5p
0.386
mTTBlnPmP
IP

Gene Details
Chromosome: 15
Transcript: NR_037673.1
Biotype: sense
Gene id: NR_037673.1 (gene)
Gene Name: SERF2-C15ORF63
UCSC graphic: -
Expression: -

miRNA Details
Name: hsa-miR-146a-5p
Sequence: ugagaacugaauuccauggguu
MirBase ID: MIMAT0000449
Related Diseases:

Publication
Tissue
Cell Type
Methods
Balakrishnan I et al. 2014
Bone Marrow
HS5
IP
Tested Cell Line: HS5
Category: Normal/Primary
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
15:43801792-43801820
exon
HITS-CLIP
DIRECT
LncBasev2
Haecker Irina et al. 2012
Bone Marrow
BCBL1
IP
Tested Cell Line: BCBL1
Category: Cancer/Malignant
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
15:43801792-43801820
exon
HITS-CLIP
DIRECT
LncBasev2
SLX1A-SULT1A3
hsa-miR-146a-5p
0.435
mTTBlnPmP
IP

Gene Details
Chromosome: 16
Transcript: NR_037608.1
Biotype: sense
Gene id: NR_037608.1 (gene)
Gene Name: SLX1A-SULT1A3
UCSC graphic: -
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant

miRNA Details
Name: hsa-miR-146a-5p
Sequence: ugagaacugaauuccauggguu
MirBase ID: MIMAT0000449
Related Diseases:

Publication
Tissue
Cell Type
Methods
Karginov FV et al. 2013
Kidney
293S
IP
Tested Cell Line: 293S
Category: Embryonic/Fetal
Experimental Condition: no treatment (control)
Location
Region
Method
Result
Validation Type
Source
16:30194704-30194732
exon
HITS-CLIP
DIRECT
LncBasev2
STAG3L4
hsa-miR-146a-5p
-
mTTBlnPmP
IP

Gene Details
Chromosome: 7
Transcript: ENST00000416602
Biotype: processed_transcript
Gene id: ENSG00000106610
Gene Name: STAG3L4
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD1 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary

miRNA Details
Name: hsa-miR-146a-5p
Sequence: ugagaacugaauuccauggguu
MirBase ID: MIMAT0000449
Related Diseases:

Publication
Tissue
Cell Type
Methods
Karginov FV et al. 2013
Kidney
293S
IP
Tested Cell Line: 293S
Category: Embryonic/Fetal
Experimental Condition: no treatment (control)
Location
Region
Method
Result
Validation Type
Source
7:67309068-67309096
exon
HITS-CLIP
DIRECT
LncBasev2
TYRO3P
hsa-miR-146a-5p
-
mTTBlnPmP
IP

Gene Details
Chromosome: 15
Transcript: ENST00000558165
Biotype: processed_pseudogene
Gene id: ENSG00000259581
Gene Name: TYRO3P
UCSC graphic:
Expression: -

miRNA Details
Name: hsa-miR-146a-5p
Sequence: ugagaacugaauuccauggguu
MirBase ID: MIMAT0000449
Related Diseases:

Publication
Tissue
Cell Type
Methods
Pillai MM et al. 2014
Mammary Gland
MDAMB231
IP
Tested Cell Line: MDAMB231
Category: Cancer/Malignant
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
15:76261046-76261074
exon
HITS-CLIP
DIRECT
LncBasev2
XIST
hsa-miR-146a-5p
0.721
mTTBlnPmP
IP

Gene Details
Chromosome: X
Transcript: ENST00000429829
Biotype: lincRNA
Gene id: ENSG00000229807
Gene Name: XIST
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
- Brain Normal/Primary
SK-N-SH Brain Cancer/Malignant
- Breast Normal/Primary
HeLa Cervix Cancer/Malignant
- Colon Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
Fibroblasts Lung Normal/Primary
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
- Lymph Node Normal/Primary
HMEpC Mammary Gland Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary

miRNA Details
Name: hsa-miR-146a-5p
Sequence: ugagaacugaauuccauggguu
MirBase ID: MIMAT0000449
Related Diseases:

Publication
Tissue
Cell Type
Methods
Karginov FV et al. 2013
Kidney
293S
IP
Tested Cell Line: 293S
Category: Embryonic/Fetal
Experimental Condition: no treatment (control)
Location
Region
Method
Result
Validation Type
Source
X:73821945-73821973
exon
HITS-CLIP
DIRECT
LncBasev2
X:73846833-73846861
exon
HITS-CLIP
DIRECT
LncBasev2
X:73846923-73846951
exon
HITS-CLIP
DIRECT
LncBasev2
X:73824600-73824628
exon
HITS-CLIP
DIRECT
LncBasev2
X:73847588-73847616
exon
HITS-CLIP
DIRECT
LncBasev2
X:73826581-73826609
exon
HITS-CLIP
DIRECT
LncBasev2
X:73821193-73821221
exon
HITS-CLIP
DIRECT
LncBasev2
X:73827937-73827965
exon
HITS-CLIP
DIRECT
LncBasev2
X:73842736-73842764
exon
HITS-CLIP
DIRECT
LncBasev2
X:73827419-73827447
exon
HITS-CLIP
DIRECT
LncBasev2
X:73843131-73843159
exon
HITS-CLIP
DIRECT
LncBasev2
X:73825079-73825107
exon
HITS-CLIP
DIRECT
LncBasev2
X:73842736-73842764
exon
HITS-CLIP
DIRECT
LncBasev2
X:73827419-73827447
exon
HITS-CLIP
DIRECT
LncBasev2
X:73848695-73848723
exon
HITS-CLIP
DIRECT
LncBasev2
X:73848695-73848723
exon
HITS-CLIP
DIRECT
LncBasev2
X:73827419-73827447
exon
HITS-CLIP
DIRECT
LncBasev2
X:73844383-73844411
exon
HITS-CLIP
DIRECT
LncBasev2
X:73843131-73843159
exon
HITS-CLIP
DIRECT
LncBasev2
X:73842736-73842764
exon
HITS-CLIP
DIRECT
LncBasev2
X:73844221-73844249
exon
HITS-CLIP
DIRECT
LncBasev2
X:73843131-73843159
exon
HITS-CLIP
DIRECT
LncBasev2
X:73826581-73826609
exon
HITS-CLIP
DIRECT
LncBasev2
X:73848695-73848723
exon
HITS-CLIP
DIRECT
LncBasev2
X:73827419-73827447
exon
HITS-CLIP
DIRECT
LncBasev2
X:73844383-73844411
exon
HITS-CLIP
DIRECT
LncBasev2
X:73825079-73825107
exon
HITS-CLIP
DIRECT
LncBasev2
X:73844221-73844249
exon
HITS-CLIP
DIRECT
LncBasev2
X:73821945-73821973
exon
HITS-CLIP
DIRECT
LncBasev2
X:73821945-73821973
exon
HITS-CLIP
DIRECT
LncBasev2
X:73849763-73849791
exon
HITS-CLIP
DIRECT
LncBasev2
X:73842736-73842764
exon
HITS-CLIP
DIRECT
LncBasev2
X:73848695-73848723
exon
HITS-CLIP
DIRECT
LncBasev2
X:73826581-73826609
exon
HITS-CLIP
DIRECT
LncBasev2
X:73827419-73827447
exon
HITS-CLIP
DIRECT
LncBasev2
X:73848695-73848723
exon
HITS-CLIP
DIRECT
LncBasev2
XLOC_003323
hsa-miR-146a-5p
0.777
mTTBlnPmP
IP

Gene Details
Chromosome: chr3
Transcript: TCONS_00005403
Biotype: transcript isomorph
Gene id: XLOC_003323
Gene Name: XLOC_003323
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Brain Normal/Primary
- Testes Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD3 - Normal/Primary

miRNA Details
Name: hsa-miR-146a-5p
Sequence: ugagaacugaauuccauggguu
MirBase ID: MIMAT0000449
Related Diseases:

Publication
Tissue
Cell Type
Methods
Karginov FV et al. 2013
Kidney
293S
IP
Tested Cell Line: 293S
Category: Embryonic/Fetal
Experimental Condition: no treatment (control)
Location
Region
Method
Result
Validation Type
Source
chr3:169954372-169954400
exon
HITS-CLIP
DIRECT
LncBasev2
XLOC_003405
hsa-miR-146a-5p
0.471
mTTBlnPmP
IP

Gene Details
Chromosome: chr3
Transcript: TCONS_00006771
Biotype: transcript isomorph
Gene id: XLOC_003405
Gene Name: XLOC_003405
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
- Brain Normal/Primary
SK-N-SH Brain Cancer/Malignant
- Breast Normal/Primary
HeLa Cervix Cancer/Malignant
- Colon Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
- Kidney Normal/Primary
- Liver Normal/Primary
Fibroblasts Lung Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary

miRNA Details
Name: hsa-miR-146a-5p
Sequence: ugagaacugaauuccauggguu
MirBase ID: MIMAT0000449
Related Diseases:

Publication
Tissue
Cell Type
Methods
Karginov FV et al. 2013
Kidney
293S
IP
Tested Cell Line: 293S
Category: Embryonic/Fetal
Experimental Condition: treatment:emetine
Location
Region
Method
Result
Validation Type
Source
chr3:197645095-197645123
exon
HITS-CLIP
DIRECT
LncBasev2
XLOC_003411
hsa-miR-146a-5p
0.449
mTTBlnPmP
IP

Gene Details
Chromosome: chr4
Transcript: TCONS_00008728
Biotype: transcript isomorph
Gene id: XLOC_003411
Gene Name: XLOC_003411
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary
- Colon Normal/Primary
- Lymph Node Normal/Primary
- Testes Normal/Primary

miRNA Details
Name: hsa-miR-146a-5p
Sequence: ugagaacugaauuccauggguu
MirBase ID: MIMAT0000449
Related Diseases:

Publication
Tissue
Cell Type
Methods
Karginov FV et al. 2013
Kidney
293S
IP
Tested Cell Line: 293S
Category: Embryonic/Fetal
Experimental Condition: treatment: emetine
Location
Region
Method
Result
Validation Type
Source
chr4:617739-617767
exon
HITS-CLIP
DIRECT
LncBasev2
XLOC_003809
hsa-miR-146a-5p
0.460
mTTBlnPmP
IP

Gene Details
Chromosome: chr4
Transcript: TCONS_00008359
Biotype: transcript isomorph
Gene id: XLOC_003809
Gene Name: XLOC_003809
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- White Blood Cell Normal/Primary

miRNA Details
Name: hsa-miR-146a-5p
Sequence: ugagaacugaauuccauggguu
MirBase ID: MIMAT0000449
Related Diseases:

Publication
Tissue
Cell Type
Methods
Skalsky Rebecca L. et al. 2012
EF3DAGO2
IP
Tested Cell Line: EF3DAGO2
Category: Normal/Primary
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
chr4:184845289-184845317
exon
PAR-CLIP
DIRECT
LncBasev2
XLOC_004697
hsa-miR-146a-5p
0.380
mTTBlnPmP
IP

Gene Details
Chromosome: chr5
Transcript: TCONS_00010872
Biotype: transcript isomorph
Gene id: XLOC_004697
Gene Name: XLOC_004697
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
GM12878 Blood Cancer/Malignant
- Brain Normal/Primary
- Breast Normal/Primary
HeLa Cervix Cancer/Malignant
- Colon Normal/Primary
- Heart Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
- Kidney Normal/Primary
A549 Lung Cancer/Malignant
Fibroblasts Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary

miRNA Details
Name: hsa-miR-146a-5p
Sequence: ugagaacugaauuccauggguu
MirBase ID: MIMAT0000449
Related Diseases:

Publication
Tissue
Cell Type
Methods
Karginov FV et al. 2013
Kidney
293S
IP
Tested Cell Line: 293S
Category: Embryonic/Fetal
Experimental Condition: treatment: arsenite
Location
Region
Method
Result
Validation Type
Source
chr5:859753-859781
exon
HITS-CLIP
DIRECT
LncBasev2
XLOC_006753
hsa-miR-146a-5p
0.526
mTTBlnPmP
IP

Gene Details
Chromosome: chr8
Transcript: TCONS_00015261
Biotype: transcript isomorph
Gene id: XLOC_006753
Gene Name: XLOC_006753
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
- Brain Normal/Primary
- Breast Normal/Primary
HeLa Cervix Cancer/Malignant
- Colon Normal/Primary
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
HREpiC Kidney Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
- Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
- Liver Normal/Primary
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary

miRNA Details
Name: hsa-miR-146a-5p
Sequence: ugagaacugaauuccauggguu
MirBase ID: MIMAT0000449
Related Diseases:

Publication
Tissue
Cell Type
Methods
Haecker Irina et al. 2012
Bone Marrow
BCBL1
IP
Tested Cell Line: BCBL1
Category: Cancer/Malignant
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
chr8:29058107-29058135
exon
HITS-CLIP
DIRECT
LncBasev2
XLOC_009124
hsa-miR-146a-5p
0.409
mTTBlnPmP
IP

Gene Details
Chromosome: chr11
Transcript: TCONS_00019298
Biotype: transcript isomorph
Gene id: XLOC_009124
Gene Name: XLOC_009124
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary

miRNA Details
Name: hsa-miR-146a-5p
Sequence: ugagaacugaauuccauggguu
MirBase ID: MIMAT0000449
Related Diseases:

Publication
Tissue
Cell Type
Methods
Skalsky Rebecca L. et al. 2012
LCLBACD3
IP
Tested Cell Line: LCLBACD3
Category: Normal/Primary
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
chr11:45745741-45745769
exon
PAR-CLIP
DIRECT
LncBasev2
XLOC_012342
hsa-miR-146a-5p
-
mTTBlnPmP
IP

Gene Details
Chromosome: chr17
Transcript: TCONS_00025107
Biotype: transcript isomorph
Gene id: XLOC_012342
Gene Name: XLOC_012342
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
Fibroblasts Lung Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary

miRNA Details
Name: hsa-miR-146a-5p
Sequence: ugagaacugaauuccauggguu
MirBase ID: MIMAT0000449
Related Diseases:

Publication
Tissue
Cell Type
Methods
Karginov FV et al. 2013
Kidney
293S
IP
Tested Cell Line: 293S
Category: Embryonic/Fetal
Experimental Condition: treatment:emetine
Location
Region
Method
Result
Validation Type
Source
chr17:81930072-81930100
exon
HITS-CLIP
DIRECT
LncBasev2
XLOC_012692
hsa-miR-146a-5p
0.448
mTTBlnPmP
IP

Gene Details
Chromosome: chr18
Transcript: TCONS_00026215
Biotype: transcript isomorph
Gene id: XLOC_012692
Gene Name: XLOC_012692
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary

miRNA Details
Name: hsa-miR-146a-5p
Sequence: ugagaacugaauuccauggguu
MirBase ID: MIMAT0000449
Related Diseases:

Publication
Tissue
Cell Type
Methods
Karginov FV et al. 2013
Kidney
293S
IP
Tested Cell Line: 293S
Category: Embryonic/Fetal
Experimental Condition: treatment:emetine
Location
Region
Method
Result
Validation Type
Source
chr18:57805493-57805521
exon
HITS-CLIP
DIRECT
LncBasev2
Funded by:
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