LncBase Experimental v.2
Help
Download
Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
Bulk download:
We have updated the bulk download module, which simplifies the download process! Please find the new online form by following this link
Deprecated!
This version is deprecated. Users are strongly advised to only use the latest, up-to-date versions of DIANA-Tools and Databases.
Please follow this link to navigate to the latest database version.

hsa-miR-145-5p


or   Search by location
Loading... Please wait, this might take a few seconds...



Go to Predicted module
Filters
Gene
miRNA
Pr. score
DIANA Links
Methods
RP11-422P24.10
hsa-miR-145-5p
0.478
mTTBlnPmP
IP

Gene Details
Chromosome: 1
Transcript: ENST00000608147
Biotype: antisense
Gene id: ENSG00000273026
Gene Name: RP11-422P24.10
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant
LCLBACD1 - Normal/Primary

miRNA Details
Name: hsa-miR-145-5p
Sequence: guccaguuuucccaggaaucccu
MirBase ID: MIMAT0000437
Related Diseases:

Publication
Tissue
Cell Type
Methods
Kameswaran V et al. 2014
Pancreas
Beta cells
IP
Tested Cell Line: Beta cells
Category: -
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
1:153966856-153966884
exon
HITS-CLIP
DIRECT
LncBasev2
RP11-425L10.1
hsa-miR-145-5p
-
mTTBlnPmP
IP

Gene Details
Chromosome: 11
Transcript: ENST00000467930
Biotype: processed_pseudogene
Gene id: ENSG00000244313
Gene Name: RP11-425L10.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
LCLBACD3 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary

miRNA Details
Name: hsa-miR-145-5p
Sequence: guccaguuuucccaggaaucccu
MirBase ID: MIMAT0000437
Related Diseases:

Publication
Tissue
Cell Type
Methods
Boudreau RL et al. 2014
Brain
-
IP
Tested Cell Line: -
Category: -
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
11:46428645-46428673
exon
HITS-CLIP
DIRECT
LncBasev2
RP11-438B23.2
hsa-miR-145-5p
0.962
mTTBlnPmP
IP

Gene Details
Chromosome: 9
Transcript: ENST00000566293
Biotype: sense_overlapping
Gene id: ENSG00000260412
Gene Name: RP11-438B23.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant

miRNA Details
Name: hsa-miR-145-5p
Sequence: guccaguuuucccaggaaucccu
MirBase ID: MIMAT0000437
Related Diseases:

Publication
Tissue
Cell Type
Methods
Kameswaran V et al. 2014
Pancreas
Beta cells
IP
Tested Cell Line: Beta cells
Category: -
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
9:27943637-27943665
exon
HITS-CLIP
DIRECT
LncBasev2
RP11-48B3.5
hsa-miR-145-5p
0.617
mTTBlnPmP
IP

Gene Details
Chromosome: 8
Transcript: ENST00000605948
Biotype: antisense
Gene id: ENSG00000251867
Gene Name: RP11-48B3.5
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant

miRNA Details
Name: hsa-miR-145-5p
Sequence: guccaguuuucccaggaaucccu
MirBase ID: MIMAT0000437
Related Diseases:

Publication
Tissue
Cell Type
Methods
Boudreau RL et al. 2014
Brain
-
IP
Tested Cell Line: -
Category: -
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
8:80485261-80485289
exon
HITS-CLIP
DIRECT
LncBasev2
RP11-492M23.2
hsa-miR-145-5p
-
mTTBlnPmP
IP

Gene Details
Chromosome: 10
Transcript: ENST00000480465
Biotype: processed_pseudogene
Gene id: ENSG00000229605
Gene Name: RP11-492M23.2
UCSC graphic:
Expression: -

miRNA Details
Name: hsa-miR-145-5p
Sequence: guccaguuuucccaggaaucccu
MirBase ID: MIMAT0000437
Related Diseases:

Publication
Tissue
Cell Type
Methods
Kameswaran V et al. 2014
Pancreas
Beta cells
IP
Tested Cell Line: Beta cells
Category: -
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
10:28899298-28899326
exon
HITS-CLIP
DIRECT
LncBasev2
RP11-53O19.3
hsa-miR-145-5p
0.839
mTTBlnPmP
IP

Gene Details
Chromosome: 5
Transcript: ENST00000607056
Biotype: lincRNA
Gene id: ENSG00000272335
Gene Name: RP11-53O19.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary

miRNA Details
Name: hsa-miR-145-5p
Sequence: guccaguuuucccaggaaucccu
MirBase ID: MIMAT0000437
Related Diseases:

Publication
Tissue
Cell Type
Methods
Boudreau RL et al. 2014
Brain
-
IP
Tested Cell Line: -
Category: -
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
5:44828014-44828042
exon
HITS-CLIP
DIRECT
LncBasev2
RP11-546B8.5
hsa-miR-145-5p
-
mTTBlnPmP
IP

Gene Details
Chromosome: 5
Transcript: ENST00000522888
Biotype: processed_pseudogene
Gene id: ENSG00000254012
Gene Name: RP11-546B8.5
UCSC graphic:
Expression: -

miRNA Details
Name: hsa-miR-145-5p
Sequence: guccaguuuucccaggaaucccu
MirBase ID: MIMAT0000437
Related Diseases:

Publication
Tissue
Cell Type
Methods
Kameswaran V et al. 2014
Pancreas
Beta cells
IP
Tested Cell Line: Beta cells
Category: -
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
5:171366564-171366592
exon
HITS-CLIP
DIRECT
LncBasev2
RP11-556K13.1
hsa-miR-145-5p
-
mTTBlnPmP
IP

Gene Details
Chromosome: 1
Transcript: ENST00000431241
Biotype: processed_pseudogene
Gene id: ENSG00000183298
Gene Name: RP11-556K13.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary

miRNA Details
Name: hsa-miR-145-5p
Sequence: guccaguuuucccaggaaucccu
MirBase ID: MIMAT0000437
Related Diseases:

Publication
Tissue
Cell Type
Methods
Haecker Irina et al. 2012
Bone Marrow
BCBL1
IP
Tested Cell Line: BCBL1
Category: Cancer/Malignant
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
1:101786938-101786966
exon
HITS-CLIP
DIRECT
LncBasev2
RP11-578C11.2
hsa-miR-145-5p
-
mTTBlnPmP
IP

Gene Details
Chromosome: 17
Transcript: ENST00000577519
Biotype: unprocessed_pseudogene
Gene id: ENSG00000266356
Gene Name: RP11-578C11.2
UCSC graphic:
Expression: -

miRNA Details
Name: hsa-miR-145-5p
Sequence: guccaguuuucccaggaaucccu
MirBase ID: MIMAT0000437
Related Diseases:

Publication
Tissue
Cell Type
Methods
Kameswaran V et al. 2014
Pancreas
Beta cells
IP
Tested Cell Line: Beta cells
Category: -
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
17:27412756-27412784
exon
HITS-CLIP
DIRECT
LncBasev2
RP11-603K19.1
hsa-miR-145-5p
-
mTTBlnPmP
IP

Gene Details
Chromosome: 12
Transcript: ENST00000551090
Biotype: processed_pseudogene
Gene id: ENSG00000258012
Gene Name: RP11-603K19.1
UCSC graphic:
Expression: -

miRNA Details
Name: hsa-miR-145-5p
Sequence: guccaguuuucccaggaaucccu
MirBase ID: MIMAT0000437
Related Diseases:

Publication
Tissue
Cell Type
Methods
Boudreau RL et al. 2014
Brain
-
IP
Tested Cell Line: -
Category: -
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
12:92858242-92858270
exon
HITS-CLIP
DIRECT
LncBasev2
RP11-620J15.3
hsa-miR-145-5p
-
mTTBlnPmP
IP

Gene Details
Chromosome: 12
Transcript: ENST00000547492
Biotype: retained_intron
Gene id: ENSG00000257698
Gene Name: RP11-620J15.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
- Brain Normal/Primary
- Breast Normal/Primary
HeLa Cervix Cancer/Malignant
- Colon Normal/Primary
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
HREpiC Kidney Normal/Primary
- Liver Normal/Primary
HepG2 Liver Cancer/Malignant
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
- Lymph Node Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary

miRNA Details
Name: hsa-miR-145-5p
Sequence: guccaguuuucccaggaaucccu
MirBase ID: MIMAT0000437
Related Diseases:

Publication
Tissue
Cell Type
Methods
Kameswaran V et al. 2014
Pancreas
Beta cells
IP
Tested Cell Line: Beta cells
Category: -
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
12:57931565-57931593
exon
HITS-CLIP
DIRECT
LncBasev2
Boudreau RL et al. 2014
Brain
-
IP
Tested Cell Line: -
Category: -
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
12:57931565-57931593
exon
HITS-CLIP
DIRECT
LncBasev2
RP11-631M6.2
hsa-miR-145-5p
-
mTTBlnPmP
IP

Gene Details
Chromosome: 5
Transcript: ENST00000439448
Biotype: processed_pseudogene
Gene id: ENSG00000250461
Gene Name: RP11-631M6.2
UCSC graphic:
Expression: -

miRNA Details
Name: hsa-miR-145-5p
Sequence: guccaguuuucccaggaaucccu
MirBase ID: MIMAT0000437
Related Diseases:

Publication
Tissue
Cell Type
Methods
Boudreau RL et al. 2014
Brain
-
IP
Tested Cell Line: -
Category: -
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
5:61375292-61375333
exon
HITS-CLIP
DIRECT
LncBasev2
RP11-658F2.3
hsa-miR-145-5p
-
mTTBlnPmP
IP

Gene Details
Chromosome: 11
Transcript: ENST00000528754
Biotype: processed_pseudogene
Gene id: ENSG00000213409
Gene Name: RP11-658F2.3
UCSC graphic:
Expression: -

miRNA Details
Name: hsa-miR-145-5p
Sequence: guccaguuuucccaggaaucccu
MirBase ID: MIMAT0000437
Related Diseases:

Publication
Tissue
Cell Type
Methods
Haecker Irina et al. 2012
Bone Marrow
BCBL1
IP
Tested Cell Line: BCBL1
Category: Cancer/Malignant
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
11:66761728-66761756
exon
HITS-CLIP
DIRECT
LncBasev2
RP11-664D7.4
hsa-miR-145-5p
-
mTTBlnPmP
IP

Gene Details
Chromosome: 8
Transcript: ENST00000512294
Biotype: antisense
Gene id: ENSG00000248801
Gene Name: RP11-664D7.4
UCSC graphic:
Expression:
  Cell Line Tissue Category
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor

miRNA Details
Name: hsa-miR-145-5p
Sequence: guccaguuuucccaggaaucccu
MirBase ID: MIMAT0000437
Related Diseases:

Publication
Tissue
Cell Type
Methods
Boudreau RL et al. 2014
Brain
-
IP
Tested Cell Line: -
Category: -
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
8:68306533-68306561
exon
HITS-CLIP
DIRECT
LncBasev2
RP11-66B24.4
hsa-miR-145-5p
0.515
mTTBlnPmP
IP

Gene Details
Chromosome: 15
Transcript: ENST00000560068
Biotype: antisense
Gene id: ENSG00000259583
Gene Name: RP11-66B24.4
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
A549 Lung Cancer/Malignant

miRNA Details
Name: hsa-miR-145-5p
Sequence: guccaguuuucccaggaaucccu
MirBase ID: MIMAT0000437
Related Diseases:

Publication
Tissue
Cell Type
Methods
Kameswaran V et al. 2014
Pancreas
Beta cells
IP
Tested Cell Line: Beta cells
Category: -
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
15:100913671-100913699
exon
HITS-CLIP
DIRECT
LncBasev2
RP11-680H20.1
hsa-miR-145-5p
-
mTTBlnPmP
IP

Gene Details
Chromosome: 11
Transcript: ENST00000397300
Biotype: processed_pseudogene
Gene id: ENSG00000256745
Gene Name: RP11-680H20.1
UCSC graphic:
Expression: -

miRNA Details
Name: hsa-miR-145-5p
Sequence: guccaguuuucccaggaaucccu
MirBase ID: MIMAT0000437
Related Diseases:

Publication
Tissue
Cell Type
Methods
Boudreau RL et al. 2014
Brain
-
IP
Tested Cell Line: -
Category: -
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
11:94188562-94188590
exon
HITS-CLIP
DIRECT
LncBasev2
RP11-700P18.1
hsa-miR-145-5p
-
mTTBlnPmP
IP

Gene Details
Chromosome: 7
Transcript: ENST00000449426
Biotype: processed_pseudogene
Gene id: ENSG00000223559
Gene Name: RP11-700P18.1
UCSC graphic:
Expression: -

miRNA Details
Name: hsa-miR-145-5p
Sequence: guccaguuuucccaggaaucccu
MirBase ID: MIMAT0000437
Related Diseases:

Publication
Tissue
Cell Type
Methods
Kameswaran V et al. 2014
Pancreas
Beta cells
IP
Tested Cell Line: Beta cells
Category: -
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
7:56291409-56291437
exon
HITS-CLIP
DIRECT
LncBasev2
RP11-736K20.5
hsa-miR-145-5p
0.547
mTTBlnPmP
IP

Gene Details
Chromosome: 11
Transcript: ENST00000528660
Biotype: antisense
Gene id: ENSG00000255471
Gene Name: RP11-736K20.5
UCSC graphic:
Expression: -

miRNA Details
Name: hsa-miR-145-5p
Sequence: guccaguuuucccaggaaucccu
MirBase ID: MIMAT0000437
Related Diseases:

Publication
Tissue
Cell Type
Methods
Boudreau RL et al. 2014
Brain
-
IP
Tested Cell Line: -
Category: -
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
11:86921478-86921506
exon
HITS-CLIP
DIRECT
LncBasev2
RP11-737O24.3
hsa-miR-145-5p
-
mTTBlnPmP
IP

Gene Details
Chromosome: 18
Transcript: ENST00000581139
Biotype: processed_transcript
Gene id: ENSG00000263606
Gene Name: RP11-737O24.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary

miRNA Details
Name: hsa-miR-145-5p
Sequence: guccaguuuucccaggaaucccu
MirBase ID: MIMAT0000437
Related Diseases:

Publication
Tissue
Cell Type
Methods
Boudreau RL et al. 2014
Brain
-
IP
Tested Cell Line: -
Category: -
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
18:2945829-2945857
exon
HITS-CLIP
DIRECT
LncBasev2
RP11-752G15.9
hsa-miR-145-5p
-
mTTBlnPmP
IP

Gene Details
Chromosome: 15
Transcript: ENST00000560958
Biotype: processed_transcript
Gene id: ENSG00000259315
Gene Name: RP11-752G15.9
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD2 - Normal/Primary

miRNA Details
Name: hsa-miR-145-5p
Sequence: guccaguuuucccaggaaucccu
MirBase ID: MIMAT0000437
Related Diseases:

Publication
Tissue
Cell Type
Methods
Boudreau RL et al. 2014
Brain
-
IP
Tested Cell Line: -
Category: -
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
15:82726201-82726229
exon
HITS-CLIP
DIRECT
LncBasev2
Funded by:
We have placed cookies on your device to help make this website and the services we offer better. By using this site, you agree to the use of cookies. Learn more
I accept