Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-132-3p

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Filters
Gene
miRNA
Pr. score
Methods
RP1-309I22.2
hsa-miR-132-3p
IP

Gene Details
Chromosome: 22
Transcript: ENST00000624184
Biotype: sense_overlapping
Gene id: ENSG00000279338
Gene Name: RP1-309I22.2
UCSC graphic:
Expression: -

miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Publication
Tissue
Cell Type
Methods
Cervix
HELA
IP
Tested Cell Line: HELA
Category: Cancer/Malignant
Experimental Condition: Hela cells were treated with control shRN.
Location
Region
Method
Result
Validation Type
Source
22:32860427-32860455
exon
HITS-CLIP
DIRECT
LncBasev2
Pancreas
Beta cells
IP
Tested Cell Line: Beta cells
Category: -
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
22:32855718-32855746
exon
HITS-CLIP
DIRECT
LncBasev2
RP3-347M6.2
hsa-miR-132-3p
-
IP

Gene Details
Chromosome: X
Transcript: ENST00000414579
Biotype: processed_pseudogene
Gene id: ENSG00000238116
Gene Name: RP3-347M6.2
UCSC graphic:
Expression: -

miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Publication
Tissue
Cell Type
Methods
Tested Cell Line: -
Category: -
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
X:100802081-100802109
exon
HITS-CLIP
DIRECT
LncBasev2
RP3-368A4.6
hsa-miR-132-3p
IP

Gene Details
Chromosome: X
Transcript: ENST00000604070
Biotype: sense_intronic
Gene id: ENSG00000271533
Gene Name: RP3-368A4.6
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
HMEpC Mammary Gland Normal/Primary

miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Publication
Tissue
Cell Type
Methods
Tested Cell Line: -
Category: -
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
X:74210463-74210491
exon
HITS-CLIP
DIRECT
LncBasev2
X:74211225-74211253
exon
HITS-CLIP
DIRECT
LncBasev2
RP4-545K15.5
hsa-miR-132-3p
-
IP

Gene Details
Chromosome: X
Transcript: ENST00000564612
Biotype: sense_overlapping
Gene id: ENSG00000261101
Gene Name: RP4-545K15.5
UCSC graphic:
Expression:
  Cell Line Tissue Category
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary

miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Publication
Tissue
Cell Type
Methods
Tested Cell Line: -
Category: -
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
X:101627856-101627884
exon
HITS-CLIP
DIRECT
LncBasev2
RP4-630A11.3
hsa-miR-132-3p
IP

Gene Details
Chromosome: 1
Transcript: ENST00000429871
Biotype: sense_intronic
Gene id: ENSG00000237852
Gene Name: RP4-630A11.3
UCSC graphic:
Expression: -

miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Publication
Tissue
Cell Type
Methods
Tested Cell Line: -
Category: -
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
1:65494008-65494036
exon
HITS-CLIP
DIRECT
LncBasev2
RP4-758J18.2
hsa-miR-132-3p
IP

Gene Details
Chromosome: 1
Transcript: ENST00000572242
Biotype: retained_intron
Gene id: ENSG00000224870
Gene Name: RP4-758J18.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD3 - Normal/Primary

miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Publication
Tissue
Cell Type
Methods
Tested Cell Line: -
Category: -
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
1:1400961-1400989
exon
HITS-CLIP
DIRECT
LncBasev2
RP4-758J24.5
hsa-miR-132-3p
IP

Gene Details
Chromosome: 1
Transcript: ENST00000606641
Biotype: lincRNA
Gene id: ENSG00000272091
Gene Name: RP4-758J24.5
UCSC graphic:
Expression:
  Cell Line Tissue Category
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
A549 Lung Cancer/Malignant

miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Publication
Tissue
Cell Type
Methods
Tested Cell Line: -
Category: -
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
1:54027113-54027141
exon
HITS-CLIP
DIRECT
LncBasev2
RP4-773N10.4
hsa-miR-132-3p
IP

Gene Details
Chromosome: 1
Transcript: ENST00000554749
Biotype: antisense
Gene id: ENSG00000258634
Gene Name: RP4-773N10.4
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant

miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Publication
Tissue
Cell Type
Methods
Tested Cell Line: -
Category: -
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
1:110062413-110062441
exon
HITS-CLIP
DIRECT
LncBasev2
RP5-935K16.1
hsa-miR-132-3p
IP

Gene Details
Chromosome: 2
Transcript: ENST00000602909
Biotype: lincRNA
Gene id: ENSG00000270081
Gene Name: RP5-935K16.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary

miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Publication
Tissue
Cell Type
Methods
Tested Cell Line: -
Category: -
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
2:127843573-127843601
exon
HITS-CLIP
DIRECT
LncBasev2
RP6-24A23.7
hsa-miR-132-3p
IP

Gene Details
Chromosome: X
Transcript: ENST00000564206
Biotype: sense_overlapping
Gene id: ENSG00000261409
Gene Name: RP6-24A23.7
UCSC graphic:
Expression:
  Cell Line Tissue Category
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor

miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Publication
Tissue
Cell Type
Methods
Tested Cell Line: 293S
Category: Embryonic/Fetal
Experimental Condition: no treatment (control)
Location
Region
Method
Result
Validation Type
Source
X:108721063-108721091
exon
HITS-CLIP
DIRECT
LncBasev2
RPL13AP25
hsa-miR-132-3p
-
IP

Gene Details
Chromosome: 13
Transcript: ENST00000484130
Biotype: processed_pseudogene
Gene id: ENSG00000136149
Gene Name: RPL13AP25
UCSC graphic:
Expression: -

miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Publication
Tissue
Cell Type
Methods
Tested Cell Line: -
Category: -
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
13:54440686-54440714
exon
HITS-CLIP
DIRECT
LncBasev2
RPL21P75
hsa-miR-132-3p
-
IP

Gene Details
Chromosome: 7
Transcript: ENST00000396599
Biotype: processed_pseudogene
Gene id: ENSG00000213860
Gene Name: RPL21P75
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary

miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Publication
Tissue
Cell Type
Methods
Pancreas
Beta cells
IP
Tested Cell Line: Beta cells
Category: -
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
7:20002881-20002909
exon
HITS-CLIP
DIRECT
LncBasev2
RPS18P9
hsa-miR-132-3p
-
IP

Gene Details
Chromosome: 6
Transcript: ENST00000482817
Biotype: processed_pseudogene
Gene id: ENSG00000220848
Gene Name: RPS18P9
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD1 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary

miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Publication
Tissue
Cell Type
Methods
Tested Cell Line: 293S
Category: Embryonic/Fetal
Experimental Condition: treatment: emetine
Location
Region
Method
Result
Validation Type
Source
6:149594536-149594564
exon
HITS-CLIP
DIRECT
LncBasev2
SKP1P1
hsa-miR-132-3p
-
IP

Gene Details
Chromosome: 7
Transcript: ENST00000438081
Biotype: processed_pseudogene
Gene id: ENSG00000231234
Gene Name: SKP1P1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD1 - Normal/Primary

miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Publication
Tissue
Cell Type
Methods
Pancreas
Beta cells
IP
Tested Cell Line: Beta cells
Category: -
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
7:66423527-66423555
exon
HITS-CLIP
DIRECT
LncBasev2
Tested Cell Line: -
Category: -
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
7:66423527-66423555
exon
HITS-CLIP
DIRECT
LncBasev2
SLC16A1-AS1
hsa-miR-132-3p
IP

Gene Details
Chromosome: 1
Transcript: ENST00000428411
Biotype: antisense
Gene id: ENSG00000226419
Gene Name: SLC16A1-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary

miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Publication
Tissue
Cell Type
Methods
Tested Cell Line: -
Category: -
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
1:112975330-112975358
exon
HITS-CLIP
DIRECT
LncBasev2
SLC2A3P2
hsa-miR-132-3p
-
IP

Gene Details
Chromosome: 1
Transcript: ENST00000331747
Biotype: processed_pseudogene
Gene id: ENSG00000185031
Gene Name: SLC2A3P2
UCSC graphic:
Expression: -

miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Publication
Tissue
Cell Type
Methods
Tested Cell Line: 293S
Category: Embryonic/Fetal
Experimental Condition: treatment: arsenite
Location
Region
Method
Result
Validation Type
Source
1:64985844-64985872
exon
HITS-CLIP
DIRECT
LncBasev2
SMG1P6
hsa-miR-132-3p
-
IP

Gene Details
Chromosome: 16
Transcript: ENST00000532337
Biotype: unprocessed_pseudogene
Gene id: ENSG00000254634
Gene Name: SMG1P6
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBAC - Normal/Primary

miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Publication
Tissue
Cell Type
Methods
Tested Cell Line: -
Category: -
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
16:29436602-29436630
exon
HITS-CLIP
DIRECT
LncBasev2
SNHG14
hsa-miR-132-3p
IP

Gene Details
Chromosome: 15
Transcript: ENST00000549804
Biotype: antisense
Gene id: ENSG00000224078
Gene Name: SNHG14
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary

miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Publication
Tissue
Cell Type
Methods
Tested Cell Line: -
Category: -
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
15:25120295-25120323
exon
HITS-CLIP
DIRECT
LncBasev2
15:25121016-25121044
exon
HITS-CLIP
DIRECT
LncBasev2
15:25120779-25120807
exon
HITS-CLIP
DIRECT
LncBasev2
SNHG16
hsa-miR-132-3p
IP

Gene Details
Chromosome: 17
Transcript: ENST00000448136
Biotype: lincRNA
Gene id: ENSG00000163597
Gene Name: SNHG16
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary

miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Publication
Tissue
Cell Type
Methods
Tested Cell Line: 293S
Category: Embryonic/Fetal
Experimental Condition: treatment:emetine
Location
Region
Method
Result
Validation Type
Source
17:76564701-76564729
exon
HITS-CLIP
DIRECT
LncBasev2
SNHG23
hsa-miR-132-3p
IP

Gene Details
Chromosome: 14
Transcript: ENST00000414488
Biotype: lincRNA
Gene id: ENSG00000225746
Gene Name: SNHG23
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary

miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Publication
Tissue
Cell Type
Methods
Tested Cell Line: -
Category: -
Experimental Condition: -
Location
Region
Method
Result
Validation Type
Source
14:100958449-100958477
exon
HITS-CLIP
DIRECT
LncBasev2
Funded by: