LncBase Predicted v.2
Help
Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
Bulk download:
We have updated the bulk download module, which simplifies the download process! Please find the new online form by following this link
Deprecated!
This version is deprecated. Users are strongly advised to only use the latest, up-to-date versions of DIANA-Tools and Databases.
Please follow this link to navigate to the latest database version.

hsa-miR-93-5p


or   Search by location
Loading... Please wait, this might take a few seconds...



Go to Experimental module
Filters

Gene
miRNA
Score
DIANA Links
RP11-586K12.10
hsa-miR-93-5p
0.717
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000570183
Biotype: lincRNA
Gene id: ENSG00000260311
Gene Name: RP11-586K12.10
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-93-5p
Sequence: caaagugcuguucgugcagguag
MirBase ID: MIMAT0000093
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1889-1904
0.017
0
6mer
827-848
0.009
0
RP11-18B16.2
hsa-miR-93-5p
0.717
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000428292
Biotype: lincRNA
Gene id: ENSG00000227482
Gene Name: RP11-18B16.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-93-5p
Sequence: caaagugcuguucgugcagguag
MirBase ID: MIMAT0000093
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
863-882
0.019
2
7mer
549-569
0.007
1
CTD-2525I3.6
hsa-miR-93-5p
0.716
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000594379
Biotype: antisense
Gene id: ENSG00000269535
Gene Name: CTD-2525I3.6
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-93-5p
Sequence: caaagugcuguucgugcagguag
MirBase ID: MIMAT0000093
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
1718-1742
0.011
0
6mer
9-32
0.005
0
7mer
421-436
0.005
Not Conserved
6mer
932-949
0.003
1
6mer
989-1013
0.002
1
LINC00243
hsa-miR-93-5p
0.716
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000399196
Biotype: lincRNA
Gene id: ENSG00000214894
Gene Name: LINC00243
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-93-5p
Sequence: caaagugcuguucgugcagguag
MirBase ID: MIMAT0000093
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
251-270
0.015
1
9mer
907-927
0.011
1
CTD-2035E11.3
hsa-miR-93-5p
0.716
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000509036
Biotype: antisense
Gene id: ENSG00000251131
Gene Name: CTD-2035E11.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-93-5p
Sequence: caaagugcuguucgugcagguag
MirBase ID: MIMAT0000093
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
161-185
0.026
1
XLOC_010216
hsa-miR-93-5p
0.716
mTTBlnEmP

Gene Details
Chromosome: chr12
Transcript: TCONS_00020949
Biotype: transcript isomorph
Gene id: XLOC_010216
Gene Name: XLOC_010216
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-93-5p
Sequence: caaagugcuguucgugcagguag
MirBase ID: MIMAT0000093
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
499-520
0.026
1
CTD-2620I22.3
hsa-miR-93-5p
0.715
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000596769
Biotype: lincRNA
Gene id: ENSG00000267943
Gene Name: CTD-2620I22.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-93-5p
Sequence: caaagugcuguucgugcagguag
MirBase ID: MIMAT0000093
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
3781-3801
0.018
1
6mer
2912-2935
0.003
1
6mer
871-893
0.003
0
7mer
2966-2989
0.002
0
LOC100128885
hsa-miR-93-5p
0.715
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: NR_077227.1
Biotype: lincRNA
Gene id: NR_077227.1 (gene)
Gene Name: LOC100128885
UCSC graphic: -
Expression: -


miRNA Details
Name: hsa-miR-93-5p
Sequence: caaagugcuguucgugcagguag
MirBase ID: MIMAT0000093
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
3112-3135
0.013
0
6mer
4287-4307
0.007
0
6mer
3307-3329
0.005
0
6mer
2646-2663
0.001
Not Conserved
XLOC_004978
hsa-miR-93-5p
0.715
mTTBlnEmP

Gene Details
Chromosome: chr5
Transcript: TCONS_00010460
Biotype: transcript isomorph
Gene id: XLOC_004978
Gene Name: XLOC_004978
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary
- Heart Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-93-5p
Sequence: caaagugcuguucgugcagguag
MirBase ID: MIMAT0000093
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
1396-1417
0.016
9
7mer
748-765
0.006
1
7mer
649-670
0.004
1
XLOC_007089
hsa-miR-93-5p
0.715
mTTBlnEmP

Gene Details
Chromosome: chr8
Transcript: TCONS_00015015
Biotype: transcript isomorph
Gene id: XLOC_007089
Gene Name: XLOC_007089
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Kidney Normal/Primary
- Lymph Node Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-93-5p
Sequence: caaagugcuguucgugcagguag
MirBase ID: MIMAT0000093
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
1174-1196
0.024
1
6mer
9354-9372
0.002
Not Conserved
RP11-1E4.1
hsa-miR-93-5p
0.714
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000562143
Biotype: antisense
Gene id: ENSG00000260093
Gene Name: RP11-1E4.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-93-5p
Sequence: caaagugcuguucgugcagguag
MirBase ID: MIMAT0000093
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
3113-3140
0.017
3
7mer
2650-2670
0.005
1
7mer
720-740
0.004
1
KMT2E-AS1
hsa-miR-93-5p
0.714
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: NR_024586.1
Biotype: lincRNA
Gene id: NR_024586.1 (gene)
Gene Name: KMT2E-AS1
UCSC graphic: -
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD2 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-93-5p
Sequence: caaagugcuguucgugcagguag
MirBase ID: MIMAT0000093
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1114-1137
0.019
1
6mer
561-587
0.004
2
6mer
1740-1753
0.002
1
6mer
2358-2384
0.001
Not Conserved
LAMTOR5-AS1
hsa-miR-93-5p
0.714
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000596890
Biotype: antisense
Gene id: ENSG00000224699
Gene Name: LAMTOR5-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-93-5p
Sequence: caaagugcuguucgugcagguag
MirBase ID: MIMAT0000093
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
169-189
0.021
1
6mer
98-114
0.005
1
AC005754.7
hsa-miR-93-5p
0.714
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000607216
Biotype: antisense
Gene id: ENSG00000272154
Gene Name: AC005754.7
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-93-5p
Sequence: caaagugcuguucgugcagguag
MirBase ID: MIMAT0000093
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
14-36
0.015
0
7mer
402-416
0.011
3
RP1-166H4.2
hsa-miR-93-5p
0.714
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000563807
Biotype: lincRNA
Gene id: ENSG00000261080
Gene Name: RP1-166H4.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-93-5p
Sequence: caaagugcuguucgugcagguag
MirBase ID: MIMAT0000093
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1086-1109
0.026
1
RP11-338L22.2
hsa-miR-93-5p
0.713
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000584258
Biotype: antisense
Gene id: ENSG00000263477
Gene Name: RP11-338L22.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-93-5p
Sequence: caaagugcuguucgugcagguag
MirBase ID: MIMAT0000093
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
637-660
0.008
1
6mer
298-321
0.006
1
6mer
493-506
0.005
1
6mer
542-566
0.004
1
6mer
458-479
0.003
0
CTA-212A2.3
hsa-miR-93-5p
0.713
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000624264
Biotype: lincRNA
Gene id: ENSG00000279217
Gene Name: CTA-212A2.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-93-5p
Sequence: caaagugcuguucgugcagguag
MirBase ID: MIMAT0000093
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
2770-2797
0.004
0
9mer
13519-13539
0.004
0
9mer
6827-6847
0.004
1
7mer
8294-8319
0.004
1
9mer
7168-7188
0.003
0
9mer
3378-3402
0.003
0
6mer
12454-12476
0.002
1
6mer
9935-9953
0.002
0
7mer
12666-12690
0.001
Not Conserved
LINC01483
hsa-miR-93-5p
0.713
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000433856
Biotype: lincRNA
Gene id: ENSG00000227517
Gene Name: LINC01483
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Placenta Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-93-5p
Sequence: caaagugcuguucgugcagguag
MirBase ID: MIMAT0000093
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2814-2837
0.011
1
6mer
559-585
0.003
1
6mer
1028-1047
0.003
3
6mer
856-872
0.003
2
7mer
1469-1493
0.002
1
9mer
1796-1820
0.002
Not Conserved
RP11-550H2.1
hsa-miR-93-5p
0.713
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000436121
Biotype: lincRNA
Gene id: ENSG00000225605
Gene Name: RP11-550H2.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-93-5p
Sequence: caaagugcuguucgugcagguag
MirBase ID: MIMAT0000093
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
11-38
0.026
0
RP11-486L19.2
hsa-miR-93-5p
0.713
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000536986
Biotype: antisense
Gene id: ENSG00000250685
Gene Name: RP11-486L19.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-93-5p
Sequence: caaagugcuguucgugcagguag
MirBase ID: MIMAT0000093
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
531-551
0.015
1
9mer
247-266
0.009
1
6mer
1452-1467
0.002
0
Funded by:
We have placed cookies on your device to help make this website and the services we offer better. By using this site, you agree to the use of cookies. Learn more
I accept