LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-92a-3p


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Gene
miRNA
Score
DIANA Links
CTA-929C8.9
hsa-miR-92a-3p
0.702
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000624278
Biotype: sense_intronic
Gene id: ENSG00000279185
Gene Name: CTA-929C8.9
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-92a-3p
Sequence: uauugcacuugucccggccugu
MirBase ID: MIMAT0000092
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
138-161
0.009
1
8mer+wobble
138-154
0.006
1
7mer
20395-20422
0.002
0
6mer
23851-23874
0.002
1
6mer
7743-7757
0.002
1
6mer
14039-14050
0.002
1
6mer
20386-20405
0.001
0
8mer+wobble
15089-15104
0.001
Not Conserved
XLOC_008106
hsa-miR-92a-3p
0.702
mTTBlnEmP

Gene Details
Chromosome: chrX
Transcript: TCONS_00017284
Biotype: transcript isomorph
Gene id: XLOC_008106
Gene Name: XLOC_008106
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-92a-3p
Sequence: uauugcacuugucccggccugu
MirBase ID: MIMAT0000092
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
1595-1618
0.015
1
6mer
65-78
0.010
0
CTD-2561J22.5
hsa-miR-92a-3p
0.702
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000599993
Biotype: lincRNA
Gene id: ENSG00000268119
Gene Name: CTD-2561J22.5
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor


miRNA Details
Name: hsa-miR-92a-3p
Sequence: uauugcacuugucccggccugu
MirBase ID: MIMAT0000092
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer+wobble
570-585
0.025
1
RP11-341N2.1
hsa-miR-92a-3p
0.702
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000567549
Biotype: antisense
Gene id: ENSG00000261186
Gene Name: RP11-341N2.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant


miRNA Details
Name: hsa-miR-92a-3p
Sequence: uauugcacuugucccggccugu
MirBase ID: MIMAT0000092
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
107-127
0.025
1
RP11-173D14.3
hsa-miR-92a-3p
0.701
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000430931
Biotype: lincRNA
Gene id: ENSG00000229495
Gene Name: RP11-173D14.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Breast Normal/Primary
- Ovary Normal/Primary


miRNA Details
Name: hsa-miR-92a-3p
Sequence: uauugcacuugucccggccugu
MirBase ID: MIMAT0000092
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
61-72
0.023
1
6mer
1128-1145
0.002
1
LINC00693
hsa-miR-92a-3p
0.701
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: NR_038840.1
Biotype: lincRNA
Gene id: NR_038840.1 (gene)
Gene Name: LINC00693
UCSC graphic: -
Expression: -


miRNA Details
Name: hsa-miR-92a-3p
Sequence: uauugcacuugucccggccugu
MirBase ID: MIMAT0000092
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1616-1629
0.016
2
6mer
1594-1611
0.005
0
6mer
1039-1062
0.003
2
RP11-1275H24.3
hsa-miR-92a-3p
0.700
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000608012
Biotype: lincRNA
Gene id: ENSG00000273084
Gene Name: RP11-1275H24.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-92a-3p
Sequence: uauugcacuugucccggccugu
MirBase ID: MIMAT0000092
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
268-288
0.025
3
AC002115.5
hsa-miR-92a-3p
0.700
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000453968
Biotype: lincRNA
Gene id: ENSG00000224910
Gene Name: AC002115.5
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-92a-3p
Sequence: uauugcacuugucccggccugu
MirBase ID: MIMAT0000092
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
345-358
0.025
Not Conserved
XLOC_006016
hsa-miR-92a-3p
0.700
mTTBlnEmP

Gene Details
Chromosome: chr7
Transcript: TCONS_00013381
Biotype: transcript isomorph
Gene id: XLOC_006016
Gene Name: XLOC_006016
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
- Heart Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-92a-3p
Sequence: uauugcacuugucccggccugu
MirBase ID: MIMAT0000092
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
633-658
0.020
3
6mer
2093-2117
0.004
1
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