LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-92a-3p


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Gene
miRNA
Score
DIANA Links
LINC01326
hsa-miR-92a-3p
0.720
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000495159
Biotype: lincRNA
Gene id: ENSG00000244321
Gene Name: LINC01326
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-92a-3p
Sequence: uauugcacuugucccggccugu
MirBase ID: MIMAT0000092
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
17-39
0.015
0
7mer
544-560
0.011
Not Conserved
RP11-335E6.3
hsa-miR-92a-3p
0.719
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000449140
Biotype: lincRNA
Gene id: ENSG00000228734
Gene Name: RP11-335E6.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-92a-3p
Sequence: uauugcacuugucccggccugu
MirBase ID: MIMAT0000092
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
114-119
0.015
1
8mer
458-472
0.011
1
RP11-259K5.2
hsa-miR-92a-3p
0.719
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000604992
Biotype: antisense
Gene id: ENSG00000270194
Gene Name: RP11-259K5.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
HeLa Cervix Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor


miRNA Details
Name: hsa-miR-92a-3p
Sequence: uauugcacuugucccggccugu
MirBase ID: MIMAT0000092
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
54-63
0.018
1
6mer
578-582
0.005
1
6mer
786-799
0.004
1
NR2F2-AS1
hsa-miR-92a-3p
0.719
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000558935
Biotype: antisense
Gene id: ENSG00000247809
Gene Name: NR2F2-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-92a-3p
Sequence: uauugcacuugucccggccugu
MirBase ID: MIMAT0000092
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
404-423
0.026
9
XLOC_001195
hsa-miR-92a-3p
0.719
mTTBlnEmP

Gene Details
Chromosome: chr1
Transcript: TCONS_00001810
Biotype: transcript isomorph
Gene id: XLOC_001195
Gene Name: XLOC_001195
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
Fibroblasts Lung Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-92a-3p
Sequence: uauugcacuugucccggccugu
MirBase ID: MIMAT0000092
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2521-2540
0.008
1
6mer
161-187
0.005
1
7mer
2041-2061
0.005
1
6mer
504-519
0.005
2
6mer
7735-7753
0.002
1
8mer+wobble
4761-4776
0.001
1
RP11-137H15.4
hsa-miR-92a-3p
0.718
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000619737
Biotype: lincRNA
Gene id: ENSG00000276008
Gene Name: RP11-137H15.4
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-92a-3p
Sequence: uauugcacuugucccggccugu
MirBase ID: MIMAT0000092
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
27-37
0.026
0
LINC01189
hsa-miR-92a-3p
0.718
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000428440
Biotype: lincRNA
Gene id: ENSG00000232827
Gene Name: LINC01189
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-92a-3p
Sequence: uauugcacuugucccggccugu
MirBase ID: MIMAT0000092
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1406-1431
0.021
1
6mer
1560-1573
0.005
1
LINC01193
hsa-miR-92a-3p
0.718
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000553416
Biotype: lincRNA
Gene id: ENSG00000258710
Gene Name: LINC01193
UCSC graphic:
Expression:
  Cell Line Tissue Category
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-92a-3p
Sequence: uauugcacuugucccggccugu
MirBase ID: MIMAT0000092
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
3343-3355
0.015
0
7mer
899-904
0.007
0
6mer
1630-1655
0.002
0
6mer
941-952
0.002
Not Conserved
RP11-798G7.7
hsa-miR-92a-3p
0.718
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000586411
Biotype: processed_transcript
Gene id: ENSG00000267246
Gene Name: RP11-798G7.7
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-92a-3p
Sequence: uauugcacuugucccggccugu
MirBase ID: MIMAT0000092
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
461-475
0.026
0
RP11-728E14.3
hsa-miR-92a-3p
0.718
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000577309
Biotype: lincRNA
Gene id: ENSG00000265043
Gene Name: RP11-728E14.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-92a-3p
Sequence: uauugcacuugucccggccugu
MirBase ID: MIMAT0000092
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
21-33
0.018
1
6mer
155-178
0.008
0
RP11-213H15.1
hsa-miR-92a-3p
0.718
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000440769
Biotype: lincRNA
Gene id: ENSG00000234292
Gene Name: RP11-213H15.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-92a-3p
Sequence: uauugcacuugucccggccugu
MirBase ID: MIMAT0000092
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
300-316
0.026
1
XLOC_002407
hsa-miR-92a-3p
0.717
mTTBlnEmP

Gene Details
Chromosome: chr2
Transcript: TCONS_00003450
Biotype: transcript isomorph
Gene id: XLOC_002407
Gene Name: XLOC_002407
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Prostate Normal/Primary


miRNA Details
Name: hsa-miR-92a-3p
Sequence: uauugcacuugucccggccugu
MirBase ID: MIMAT0000092
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
172-185
0.026
7
RP11-383C5.3
hsa-miR-92a-3p
0.717
mTTBlnEmP

Gene Details
Chromosome: 10
Transcript: ENST00000415305
Biotype: lincRNA
Gene id: ENSG00000228021
Gene Name: RP11-383C5.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
HeLa Cervix Cancer/Malignant


miRNA Details
Name: hsa-miR-92a-3p
Sequence: uauugcacuugucccggccugu
MirBase ID: MIMAT0000092
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1136-1160
0.019
4
6mer
652-678
0.004
3
6mer
2600-2620
0.003
0
MLIP-AS1
hsa-miR-92a-3p
0.717
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000434196
Biotype: antisense
Gene id: ENSG00000235050
Gene Name: MLIP-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-92a-3p
Sequence: uauugcacuugucccggccugu
MirBase ID: MIMAT0000092
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
633-652
0.026
1
AC017048.2
hsa-miR-92a-3p
0.717
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000431455
Biotype: lincRNA
Gene id: ENSG00000236231
Gene Name: AC017048.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-92a-3p
Sequence: uauugcacuugucccggccugu
MirBase ID: MIMAT0000092
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
172-185
0.026
7
RP11-115J16.1
hsa-miR-92a-3p
0.717
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000520390
Biotype: lincRNA
Gene id: ENSG00000254235
Gene Name: RP11-115J16.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant


miRNA Details
Name: hsa-miR-92a-3p
Sequence: uauugcacuugucccggccugu
MirBase ID: MIMAT0000092
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
3121-3140
0.018
1
7mer
3326-3341
0.008
0
AC019117.2
hsa-miR-92a-3p
0.716
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000439046
Biotype: lincRNA
Gene id: ENSG00000236039
Gene Name: AC019117.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-92a-3p
Sequence: uauugcacuugucccggccugu
MirBase ID: MIMAT0000092
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
138-164
0.026
0
FLJ42627
hsa-miR-92a-3p
0.716
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000563449
Biotype: antisense
Gene id: ENSG00000261613
Gene Name: FLJ42627
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-92a-3p
Sequence: uauugcacuugucccggccugu
MirBase ID: MIMAT0000092
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
75-84
0.022
2
6mer
1521-1541
0.004
0
RP4-714D9.5
hsa-miR-92a-3p
0.716
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000564623
Biotype: sense_overlapping
Gene id: ENSG00000261254
Gene Name: RP4-714D9.5
UCSC graphic:
Expression:
  Cell Line Tissue Category
HeLa Cervix Cancer/Malignant


miRNA Details
Name: hsa-miR-92a-3p
Sequence: uauugcacuugucccggccugu
MirBase ID: MIMAT0000092
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
3840-3862
0.009
1
6mer
4935-4950
0.007
1
6mer
4935-4957
0.007
2
6mer
4020-4042
0.003
2
RP13-379O24.3
hsa-miR-92a-3p
0.716
mTTBlnEmP

Gene Details
Chromosome: 20
Transcript: ENST00000606283
Biotype: lincRNA
Gene id: ENSG00000272050
Gene Name: RP13-379O24.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-92a-3p
Sequence: uauugcacuugucccggccugu
MirBase ID: MIMAT0000092
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
668-695
0.022
0
8mer+wobble
417-439
0.004
0
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