LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-92a-3p


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Gene
miRNA
Score
DIANA Links
LINC01419
hsa-miR-92a-3p
0.738
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000522365
Biotype: lincRNA
Gene id: ENSG00000253898
Gene Name: LINC01419
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-92a-3p
Sequence: uauugcacuugucccggccugu
MirBase ID: MIMAT0000092
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
28-41
0.017
0
6mer
309-333
0.007
2
6mer
518-536
0.004
0
KB-1205A7.2
hsa-miR-92a-3p
0.738
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000517397
Biotype: antisense
Gene id: ENSG00000253911
Gene Name: KB-1205A7.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-92a-3p
Sequence: uauugcacuugucccggccugu
MirBase ID: MIMAT0000092
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer+wobble
27-42
0.019
1
6mer
260-278
0.009
1
POU6F2-AS1
hsa-miR-92a-3p
0.738
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000433519
Biotype: antisense
Gene id: ENSG00000224122
Gene Name: POU6F2-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-92a-3p
Sequence: uauugcacuugucccggccugu
MirBase ID: MIMAT0000092
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
73-90
0.028
6
XLOC_011950
hsa-miR-92a-3p
0.737
mTTBlnEmP

Gene Details
Chromosome: chr16
Transcript: TCONS_00024662
Biotype: transcript isomorph
Gene id: XLOC_011950
Gene Name: XLOC_011950
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
- Brain Normal/Primary
- Breast Normal/Primary
HeLa Cervix Cancer/Malignant
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
- Kidney Normal/Primary
- Liver Normal/Primary
- Lung Normal/Primary
A549 Lung Cancer/Malignant
Fibroblasts Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-92a-3p
Sequence: uauugcacuugucccggccugu
MirBase ID: MIMAT0000092
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
246-263
0.013
1
6mer
36-58
0.007
1
7mer
1508-1522
0.006
2
6mer
1809-1824
0.002
Not Conserved
RP11-258F22.2
hsa-miR-92a-3p
0.737
mTTBlnEmP

Gene Details
Chromosome: 10
Transcript: ENST00000564417
Biotype: lincRNA
Gene id: ENSG00000260137
Gene Name: RP11-258F22.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-92a-3p
Sequence: uauugcacuugucccggccugu
MirBase ID: MIMAT0000092
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
119-133
0.028
0
LINC00710
hsa-miR-92a-3p
0.737
mTTBlnEmP

Gene Details
Chromosome: 10
Transcript: ENST00000617890
Biotype: retained_intron
Gene id: ENSG00000229240
Gene Name: LINC00710
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-92a-3p
Sequence: uauugcacuugucccggccugu
MirBase ID: MIMAT0000092
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
188-203
0.028
6
XLOC_009835
hsa-miR-92a-3p
0.737
mTTBlnEmP

Gene Details
Chromosome: chr12
Transcript: TCONS_00020193
Biotype: transcript isomorph
Gene id: XLOC_009835
Gene Name: XLOC_009835
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
GM12878 Blood Cancer/Malignant
- Breast Normal/Primary
- Colon Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD2 - Normal/Primary


miRNA Details
Name: hsa-miR-92a-3p
Sequence: uauugcacuugucccggccugu
MirBase ID: MIMAT0000092
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
75-100
0.019
4
6mer
1980-2003
0.003
1
6mer
434-449
0.003
0
6mer
453-475
0.003
1
XLOC_010416
hsa-miR-92a-3p
0.737
mTTBlnEmP

Gene Details
Chromosome: chr13
Transcript: TCONS_00021816
Biotype: transcript isomorph
Gene id: XLOC_010416
Gene Name: XLOC_010416
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Heart Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-92a-3p
Sequence: uauugcacuugucccggccugu
MirBase ID: MIMAT0000092
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
546-565
0.028
0
XLOC_001475
hsa-miR-92a-3p
0.736
mTTBlnEmP

Gene Details
Chromosome: chr2
Transcript: TCONS_00003681
Biotype: transcript isomorph
Gene id: XLOC_001475
Gene Name: XLOC_001475
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary
- Lung Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-92a-3p
Sequence: uauugcacuugucccggccugu
MirBase ID: MIMAT0000092
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
262-288
0.019
1
6mer
117-142
0.009
5
LINC00433
hsa-miR-92a-3p
0.736
mTTBlnEmP

Gene Details
Chromosome: 13
Transcript: ENST00000448425
Biotype: lincRNA
Gene id: ENSG00000229443
Gene Name: LINC00433
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-92a-3p
Sequence: uauugcacuugucccggccugu
MirBase ID: MIMAT0000092
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
121-144
0.027
1
XLOC_002318
hsa-miR-92a-3p
0.735
mTTBlnEmP

Gene Details
Chromosome: chr2
Transcript: TCONS_00004444
Biotype: transcript isomorph
Gene id: XLOC_002318
Gene Name: XLOC_002318
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-92a-3p
Sequence: uauugcacuugucccggccugu
MirBase ID: MIMAT0000092
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
494-520
0.027
1
CTD-3074O7.12
hsa-miR-92a-3p
0.734
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000602427
Biotype: lincRNA
Gene id: ENSG00000269990
Gene Name: CTD-3074O7.12
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-92a-3p
Sequence: uauugcacuugucccggccugu
MirBase ID: MIMAT0000092
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
937-952
0.018
1
8mer
607-622
0.005
0
8mer+wobble
1991-2006
0.004
0
RP11-310I9.1
hsa-miR-92a-3p
0.734
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000506926
Biotype: antisense
Gene id: ENSG00000248601
Gene Name: RP11-310I9.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-92a-3p
Sequence: uauugcacuugucccggccugu
MirBase ID: MIMAT0000092
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
316-335
0.027
0
LINC00662
hsa-miR-92a-3p
0.734
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000561521
Biotype: lincRNA
Gene id: ENSG00000261824
Gene Name: LINC00662
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
- Brain Normal/Primary
- Breast Normal/Primary
HeLa Cervix Cancer/Malignant
- Colon Normal/Primary
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
HREpiC Kidney Normal/Primary
- Liver Normal/Primary
HepG2 Liver Cancer/Malignant
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
- Lymph Node Normal/Primary
HMEpC Mammary Gland Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-92a-3p
Sequence: uauugcacuugucccggccugu
MirBase ID: MIMAT0000092
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
182-208
0.012
Not Conserved
7mer
2090-2105
0.011
Not Conserved
7mer
1245-1271
0.005
Not Conserved
CTA-212A2.3
hsa-miR-92a-3p
0.734
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000624264
Biotype: lincRNA
Gene id: ENSG00000279217
Gene Name: CTA-212A2.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-92a-3p
Sequence: uauugcacuugucccggccugu
MirBase ID: MIMAT0000092
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
9296-9314
0.004
0
8mer
9688-9703
0.004
1
8mer
11116-11131
0.004
0
8mer
11428-11443
0.003
1
8mer+wobble
5824-5839
0.002
1
8mer+wobble
13178-13193
0.002
0
6mer
8485-8504
0.002
1
6mer
10238-10254
0.002
0
7mer
2743-2770
0.001
0
7mer
13178-13200
0.001
0
8mer+wobble
11967-11982
0.001
0
8mer+wobble
8596-8611
0.001
1
6mer
3364-3390
0.001
Not Conserved
RP11-674P19.2
hsa-miR-92a-3p
0.734
mTTBlnEmP

Gene Details
Chromosome: 18
Transcript: ENST00000579651
Biotype: lincRNA
Gene id: ENSG00000264705
Gene Name: RP11-674P19.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-92a-3p
Sequence: uauugcacuugucccggccugu
MirBase ID: MIMAT0000092
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1827-1834
0.027
Not Conserved
MCCC1-AS1
hsa-miR-92a-3p
0.734
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000471731
Biotype: antisense
Gene id: ENSG00000243368
Gene Name: MCCC1-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-92a-3p
Sequence: uauugcacuugucccggccugu
MirBase ID: MIMAT0000092
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
19-33
0.027
0
XLOC_000318
hsa-miR-92a-3p
0.733
mTTBlnEmP

Gene Details
Chromosome: chr1
Transcript: TCONS_00001079
Biotype: transcript isomorph
Gene id: XLOC_000318
Gene Name: XLOC_000318
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-92a-3p
Sequence: uauugcacuugucccggccugu
MirBase ID: MIMAT0000092
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
7618-7638
0.006
0
8mer
5284-5299
0.005
0
6mer
9216-9242
0.003
0
7mer
1468-1492
0.003
Not Conserved
6mer
4589-4599
0.002
2
6mer
317-339
0.002
1
8mer+wobble
3507-3522
0.002
1
6mer
8421-8434
0.002
1
6mer
8155-8173
0.002
Not Conserved
RP11-677M14.2
hsa-miR-92a-3p
0.733
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000531241
Biotype: antisense
Gene id: ENSG00000255045
Gene Name: RP11-677M14.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-92a-3p
Sequence: uauugcacuugucccggccugu
MirBase ID: MIMAT0000092
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
63-80
0.027
1
RP11-804F13.1
hsa-miR-92a-3p
0.733
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000552639
Biotype: lincRNA
Gene id: ENSG00000258119
Gene Name: RP11-804F13.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-92a-3p
Sequence: uauugcacuugucccggccugu
MirBase ID: MIMAT0000092
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
233-256
0.022
3
6mer
325-339
0.006
3
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