LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-92a-3p


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Gene
miRNA
Score
DIANA Links
AC007131.1
hsa-miR-92a-3p
0.746
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000409590
Biotype: lincRNA
Gene id: ENSG00000222030
Gene Name: AC007131.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-92a-3p
Sequence: uauugcacuugucccggccugu
MirBase ID: MIMAT0000092
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
463-468
0.028
10
XLOC_005202
hsa-miR-92a-3p
0.746
mTTBlnEmP

Gene Details
Chromosome: chr6
Transcript: TCONS_00011735
Biotype: transcript isomorph
Gene id: XLOC_005202
Gene Name: XLOC_005202
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-92a-3p
Sequence: uauugcacuugucccggccugu
MirBase ID: MIMAT0000092
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
21-44
0.015
1
7mer
87-109
0.013
3
PDCD4-AS1
hsa-miR-92a-3p
0.746
mTTBlnEmP

Gene Details
Chromosome: 10
Transcript: NR_026932.1
Biotype: lincRNA
Gene id: NR_026932.1 (gene)
Gene Name: PDCD4-AS1
UCSC graphic: -
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-92a-3p
Sequence: uauugcacuugucccggccugu
MirBase ID: MIMAT0000092
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
881-891
0.017
1
7mer
1175-1197
0.007
1
6mer
1797-1809
0.005
1
XLOC_011529
hsa-miR-92a-3p
0.745
mTTBlnEmP

Gene Details
Chromosome: chr15
Transcript: TCONS_00023739
Biotype: transcript isomorph
Gene id: XLOC_011529
Gene Name: XLOC_011529
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-92a-3p
Sequence: uauugcacuugucccggccugu
MirBase ID: MIMAT0000092
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
137-158
0.028
1
RP11-109D24.1
hsa-miR-92a-3p
0.745
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000562568
Biotype: sense_intronic
Gene id: ENSG00000260600
Gene Name: RP11-109D24.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-92a-3p
Sequence: uauugcacuugucccggccugu
MirBase ID: MIMAT0000092
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1818-1836
0.012
1
7mer
576-602
0.012
2
6mer
632-657
0.004
1
RP11-789C2.1
hsa-miR-92a-3p
0.745
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000420721
Biotype: lincRNA
Gene id: ENSG00000251598
Gene Name: RP11-789C2.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-92a-3p
Sequence: uauugcacuugucccggccugu
MirBase ID: MIMAT0000092
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer+wobble
233-248
0.028
1
XLOC_011222
hsa-miR-92a-3p
0.744
mTTBlnEmP

Gene Details
Chromosome: chr15
Transcript: TCONS_00023376
Biotype: transcript isomorph
Gene id: XLOC_011222
Gene Name: XLOC_011222
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Heart Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-92a-3p
Sequence: uauugcacuugucccggccugu
MirBase ID: MIMAT0000092
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
101-123
0.028
0
RP11-494M8.4
hsa-miR-92a-3p
0.744
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000529488
Biotype: sense_overlapping
Gene id: ENSG00000254951
Gene Name: RP11-494M8.4
UCSC graphic:
Expression:
  Cell Line Tissue Category
HMEpC Mammary Gland Normal/Primary


miRNA Details
Name: hsa-miR-92a-3p
Sequence: uauugcacuugucccggccugu
MirBase ID: MIMAT0000092
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
505-519
0.028
1
RP11-678G15.1
hsa-miR-92a-3p
0.744
mTTBlnEmP

Gene Details
Chromosome: 18
Transcript: ENST00000584036
Biotype: sense_intronic
Gene id: ENSG00000264596
Gene Name: RP11-678G15.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-92a-3p
Sequence: uauugcacuugucccggccugu
MirBase ID: MIMAT0000092
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1490-1516
0.012
0
6mer
1548-1557
0.006
1
6mer
271-289
0.005
1
6mer
1185-1210
0.003
1
6mer
1420-1446
0.002
Not Conserved
CTD-2562J15.6
hsa-miR-92a-3p
0.743
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000588799
Biotype: antisense
Gene id: ENSG00000267275
Gene Name: CTD-2562J15.6
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-92a-3p
Sequence: uauugcacuugucccggccugu
MirBase ID: MIMAT0000092
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
14-21
0.028
1
NR2F1-AS1
hsa-miR-92a-3p
0.743
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000503134
Biotype: antisense
Gene id: ENSG00000237187
Gene Name: NR2F1-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-92a-3p
Sequence: uauugcacuugucccggccugu
MirBase ID: MIMAT0000092
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
369-386
0.024
1
6mer
673-690
0.002
1
8mer+wobble
569-584
0.002
1
RP11-178F10.3
hsa-miR-92a-3p
0.743
mTTBlnEmP

Gene Details
Chromosome: 18
Transcript: ENST00000581648
Biotype: lincRNA
Gene id: ENSG00000266489
Gene Name: RP11-178F10.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-92a-3p
Sequence: uauugcacuugucccggccugu
MirBase ID: MIMAT0000092
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
28-54
0.028
0
RP11-171I2.1
hsa-miR-92a-3p
0.743
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000590024
Biotype: antisense
Gene id: ENSG00000267784
Gene Name: RP11-171I2.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-92a-3p
Sequence: uauugcacuugucccggccugu
MirBase ID: MIMAT0000092
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
3021-3040
0.014
3
6mer
478-503
0.005
3
6mer
2891-2904
0.005
2
6mer
2420-2440
0.004
6
HIF1A-AS2
hsa-miR-92a-3p
0.742
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: NR_045406.1
Biotype: antisense
Gene id: NR_045406.1 (gene)
Gene Name: HIF1A-AS2
UCSC graphic: -
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
LCLBAC - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-92a-3p
Sequence: uauugcacuugucccggccugu
MirBase ID: MIMAT0000092
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
507-519
0.017
9
6mer
284-298
0.007
5
6mer
279-294
0.004
4
XLOC_014292
hsa-miR-92a-3p
0.742
mTTBlnEmP

Gene Details
Chromosome: chr22
Transcript: TCONS_00029344
Biotype: transcript isomorph
Gene id: XLOC_014292
Gene Name: XLOC_014292
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Kidney Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-92a-3p
Sequence: uauugcacuugucccggccugu
MirBase ID: MIMAT0000092
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
114-123
0.024
1
6mer
458-480
0.004
0
AC005301.8
hsa-miR-92a-3p
0.740
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000422917
Biotype: lincRNA
Gene id: ENSG00000235343
Gene Name: AC005301.8
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-92a-3p
Sequence: uauugcacuugucccggccugu
MirBase ID: MIMAT0000092
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
115-124
0.024
1
6mer
459-481
0.004
0
CTC-325H20.2
hsa-miR-92a-3p
0.740
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000592371
Biotype: lincRNA
Gene id: ENSG00000266912
Gene Name: CTC-325H20.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-92a-3p
Sequence: uauugcacuugucccggccugu
MirBase ID: MIMAT0000092
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
925-951
0.022
0
6mer
449-465
0.006
0
XLOC_011623
hsa-miR-92a-3p
0.740
mTTBlnEmP

Gene Details
Chromosome: chr16
Transcript: TCONS_00024244
Biotype: transcript isomorph
Gene id: XLOC_011623
Gene Name: XLOC_011623
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
SK-N-SH Brain Cancer/Malignant
- Breast Normal/Primary
- Colon Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
- Lymph Node Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-92a-3p
Sequence: uauugcacuugucccggccugu
MirBase ID: MIMAT0000092
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1773-1782
0.024
3
6mer
313-336
0.004
0
XLOC_006863
hsa-miR-92a-3p
0.738
mTTBlnEmP

Gene Details
Chromosome: chr8
Transcript: TCONS_00014497
Biotype: transcript isomorph
Gene id: XLOC_006863
Gene Name: XLOC_006863
UCSC graphic: -
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
- Testes Normal/Primary
LCLBAC - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-92a-3p
Sequence: uauugcacuugucccggccugu
MirBase ID: MIMAT0000092
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
28-41
0.017
0
6mer
309-333
0.007
2
6mer
518-536
0.004
0
XLOC_007278
hsa-miR-92a-3p
0.738
mTTBlnEmP

Gene Details
Chromosome: chr9
Transcript: TCONS_00015916
Biotype: transcript isomorph
Gene id: XLOC_007278
Gene Name: XLOC_007278
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-92a-3p
Sequence: uauugcacuugucccggccugu
MirBase ID: MIMAT0000092
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
20-37
0.028
2
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