LncBase Predicted v.2
Help
Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
Bulk download:
We have updated the bulk download module, which simplifies the download process! Please find the new online form by following this link
Deprecated!
This version is deprecated. Users are strongly advised to only use the latest, up-to-date versions of DIANA-Tools and Databases.
Please follow this link to navigate to the latest database version.

hsa-miR-92a-3p


or   Search by location
Loading... Please wait, this might take a few seconds...



Go to Experimental module
Filters

Gene
miRNA
Score
DIANA Links
RP11-363G2.4
hsa-miR-92a-3p
0.765
mTTBlnEmP

Gene Details
Chromosome: 13
Transcript: ENST00000445646
Biotype: lincRNA
Gene id: ENSG00000229556
Gene Name: RP11-363G2.4
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant


miRNA Details
Name: hsa-miR-92a-3p
Sequence: uauugcacuugucccggccugu
MirBase ID: MIMAT0000092
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
378-389
0.013
0
8mer+wobble
918-933
0.009
0
6mer
695-712
0.008
0
RP11-1277A3.1
hsa-miR-92a-3p
0.764
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000499900
Biotype: antisense
Gene id: ENSG00000247679
Gene Name: RP11-1277A3.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-92a-3p
Sequence: uauugcacuugucccggccugu
MirBase ID: MIMAT0000092
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
204-218
0.021
1
7mer
592-615
0.009
0
RP11-251P6.1
hsa-miR-92a-3p
0.764
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000623447
Biotype: lincRNA
Gene id: ENSG00000230768
Gene Name: RP11-251P6.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-92a-3p
Sequence: uauugcacuugucccggccugu
MirBase ID: MIMAT0000092
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
18-41
0.027
2
6mer
519-541
0.003
0
RP11-53I6.3
hsa-miR-92a-3p
0.763
mTTBlnEmP

Gene Details
Chromosome: 18
Transcript: ENST00000582233
Biotype: antisense
Gene id: ENSG00000265008
Gene Name: RP11-53I6.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-92a-3p
Sequence: uauugcacuugucccggccugu
MirBase ID: MIMAT0000092
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
67-81
0.030
0
CTD-2562J15.6
hsa-miR-92a-3p
0.762
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000588945
Biotype: antisense
Gene id: ENSG00000267275
Gene Name: CTD-2562J15.6
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-92a-3p
Sequence: uauugcacuugucccggccugu
MirBase ID: MIMAT0000092
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
12-19
0.030
1
XLOC_012114
hsa-miR-92a-3p
0.762
mTTBlnEmP

Gene Details
Chromosome: chr17
Transcript: TCONS_00025843
Biotype: transcript isomorph
Gene id: XLOC_012114
Gene Name: XLOC_012114
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-92a-3p
Sequence: uauugcacuugucccggccugu
MirBase ID: MIMAT0000092
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
356-371
0.030
Not Conserved
LINC00323
hsa-miR-92a-3p
0.761
mTTBlnEmP

Gene Details
Chromosome: 21
Transcript: ENST00000441268
Biotype: antisense
Gene id: ENSG00000226496
Gene Name: LINC00323
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-92a-3p
Sequence: uauugcacuugucccggccugu
MirBase ID: MIMAT0000092
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
160-181
0.021
1
6mer
23-42
0.009
3
CTB-5E10.3
hsa-miR-92a-3p
0.761
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000586894
Biotype: antisense
Gene id: ENSG00000267633
Gene Name: CTB-5E10.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-92a-3p
Sequence: uauugcacuugucccggccugu
MirBase ID: MIMAT0000092
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
514-536
0.030
0
XLOC_014019
hsa-miR-92a-3p
0.760
mTTBlnEmP

Gene Details
Chromosome: chr21
Transcript: TCONS_00029091
Biotype: transcript isomorph
Gene id: XLOC_014019
Gene Name: XLOC_014019
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor


miRNA Details
Name: hsa-miR-92a-3p
Sequence: uauugcacuugucccggccugu
MirBase ID: MIMAT0000092
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
271-287
0.015
1
7mer
1594-1614
0.013
6
6mer
1482-1508
0.002
1
RP11-157D23.2
hsa-miR-92a-3p
0.760
mTTBlnEmP

Gene Details
Chromosome: X
Transcript: ENST00000438867
Biotype: lincRNA
Gene id: ENSG00000234191
Gene Name: RP11-157D23.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-92a-3p
Sequence: uauugcacuugucccggccugu
MirBase ID: MIMAT0000092
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
644-670
0.030
2
RP11-416O18.2
hsa-miR-92a-3p
0.760
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000462382
Biotype: lincRNA
Gene id: ENSG00000240478
Gene Name: RP11-416O18.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-92a-3p
Sequence: uauugcacuugucccggccugu
MirBase ID: MIMAT0000092
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
233-260
0.019
2
6mer
251-274
0.011
6
XLOC_009217
hsa-miR-92a-3p
0.758
mTTBlnEmP

Gene Details
Chromosome: chr11
Transcript: TCONS_00019151
Biotype: transcript isomorph
Gene id: XLOC_009217
Gene Name: XLOC_009217
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
- Heart Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
- Kidney Normal/Primary
- Liver Normal/Primary
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-92a-3p
Sequence: uauugcacuugucccggccugu
MirBase ID: MIMAT0000092
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1322-1344
0.029
0
XLOC_013995
hsa-miR-92a-3p
0.758
mTTBlnEmP

Gene Details
Chromosome: chr21
Transcript: TCONS_00029073
Biotype: transcript isomorph
Gene id: XLOC_013995
Gene Name: XLOC_013995
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
- Brain Normal/Primary
SK-N-SH Brain Cancer/Malignant
- Breast Normal/Primary
HeLa Cervix Cancer/Malignant
- Colon Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
- Liver Normal/Primary
HepG2 Liver Cancer/Malignant
- Lung Normal/Primary
A549 Lung Cancer/Malignant
Fibroblasts Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-92a-3p
Sequence: uauugcacuugucccggccugu
MirBase ID: MIMAT0000092
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
4120-4144
0.019
1
7mer
516-537
0.010
0
BCYRN1
hsa-miR-92a-3p
0.758
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000418539
Biotype: lincRNA
Gene id: ENSG00000236824
Gene Name: BCYRN1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HeLa Cervix Cancer/Malignant
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-92a-3p
Sequence: uauugcacuugucccggccugu
MirBase ID: MIMAT0000092
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
13431-13446
0.008
1
6mer
12354-12369
0.004
3
8mer+wobble
6810-6825
0.003
0
6mer
1025-1037
0.003
1
8mer+wobble
8449-8464
0.002
1
6mer
8227-8251
0.002
1
8mer+wobble
3483-3498
0.002
1
6mer
4329-4355
0.001
0
6mer
3889-3911
0.001
4
6mer
3237-3253
0.001
1
7mer
11832-11847
0.001
1
6mer
9668-9684
0.001
0
6mer
3499-3521
0.000
0
LINC00384
hsa-miR-92a-3p
0.758
mTTBlnEmP

Gene Details
Chromosome: 13
Transcript: ENST00000437721
Biotype: lincRNA
Gene id: ENSG00000232117
Gene Name: LINC00384
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-92a-3p
Sequence: uauugcacuugucccggccugu
MirBase ID: MIMAT0000092
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
586-608
0.025
1
8mer
1790-1811
0.005
1
AC005307.3
hsa-miR-92a-3p
0.757
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000592347
Biotype: lincRNA
Gene id: ENSG00000267243
Gene Name: AC005307.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor


miRNA Details
Name: hsa-miR-92a-3p
Sequence: uauugcacuugucccggccugu
MirBase ID: MIMAT0000092
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
564-588
0.029
Not Conserved
CXorf24
hsa-miR-92a-3p
0.757
mTTBlnEmP

Gene Details
Chromosome: X
Transcript: ENST00000624822
Biotype: lincRNA
Gene id: ENSG00000196741
Gene Name: CXorf24
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
HepG2 Liver Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-92a-3p
Sequence: uauugcacuugucccggccugu
MirBase ID: MIMAT0000092
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1140-1145
0.019
1
7mer
829-845
0.011
1
RP11-370I10.2
hsa-miR-92a-3p
0.757
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000547523
Biotype: lincRNA
Gene id: ENSG00000258234
Gene Name: RP11-370I10.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-92a-3p
Sequence: uauugcacuugucccggccugu
MirBase ID: MIMAT0000092
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
46-68
0.017
1
6mer
310-335
0.006
1
8mer+wobble
53-68
0.006
1
RP11-255A11.2
hsa-miR-92a-3p
0.757
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000420315
Biotype: antisense
Gene id: ENSG00000228072
Gene Name: RP11-255A11.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-92a-3p
Sequence: uauugcacuugucccggccugu
MirBase ID: MIMAT0000092
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
213-235
0.029
0
RP11-896J10.3
hsa-miR-92a-3p
0.756
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000521945
Biotype: processed_transcript
Gene id: ENSG00000257520
Gene Name: RP11-896J10.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-92a-3p
Sequence: uauugcacuugucccggccugu
MirBase ID: MIMAT0000092
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
614-640
0.024
7
6mer
22-47
0.006
1
Funded by:
We have placed cookies on your device to help make this website and the services we offer better. By using this site, you agree to the use of cookies. Learn more
I accept