LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-767-5p


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Gene
miRNA
Score
DIANA Links
XLOC_007440
hsa-miR-767-5p
0.856
mTTBlnEmP

Gene Details
Chromosome: chr9
Transcript: TCONS_00016048
Biotype: transcript isomorph
Gene id: XLOC_007440
Gene Name: XLOC_007440
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Colon Normal/Primary
Fibroblasts Lung Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
679-703
0.040
1
NEAT1
hsa-miR-767-5p
0.855
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000501122
Biotype: lincRNA
Gene id: ENSG00000245532
Gene Name: NEAT1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
8502-8528
0.008
1
7mer
16027-16045
0.006
1
7mer
9565-9591
0.006
2
8mer
5697-5722
0.005
0
7mer
5038-5064
0.003
0
7mer
16744-16759
0.002
1
6mer
21820-21845
0.002
3
7mer
5579-5596
0.002
0
6mer
716-743
0.002
0
8mer
7053-7072
0.002
0
6mer
17006-17031
0.001
1
6mer
16337-16361
0.001
1
6mer
7424-7442
0.001
0
RP11-575L7.4
hsa-miR-767-5p
0.854
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000586211
Biotype: antisense
Gene id: ENSG00000231616
Gene Name: RP11-575L7.4
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
141-165
0.020
2
8mer
375-398
0.019
Not Conserved
RP11-351I21.11
hsa-miR-767-5p
0.851
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000602981
Biotype: lincRNA
Gene id: ENSG00000270074
Gene Name: RP11-351I21.11
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
378-404
0.037
1
6mer
1481-1495
0.002
Not Conserved
RP4-671O14.6
hsa-miR-767-5p
0.849
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000624919
Biotype: sense_overlapping
Gene id: ENSG00000280434
Gene Name: RP4-671O14.6
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
125-149
0.027
0
7mer
5288-5304
0.003
0
9mer
9214-9234
0.002
0
6mer
3935-3955
0.001
2
7mer
12290-12315
0.001
0
6mer
5962-5983
0.001
0
6mer
2137-2160
0.001
Not Conserved
6mer
7772-7790
0.001
Not Conserved
6mer
11299-11322
0.001
0
6mer
4403-4425
0.001
0
6mer
4036-4062
0.001
1
CTB-114C7.4
hsa-miR-767-5p
0.849
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000511921
Biotype: lincRNA
Gene id: ENSG00000250274
Gene Name: CTB-114C7.4
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Placenta Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1425-1446
0.024
0
7mer
2016-2040
0.015
1
RP11-102F4.2
hsa-miR-767-5p
0.848
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000533344
Biotype: antisense
Gene id: ENSG00000254557
Gene Name: RP11-102F4.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
309-324
0.039
1
RP11-16E18.3
hsa-miR-767-5p
0.847
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000569835
Biotype: lincRNA
Gene id: ENSG00000261542
Gene Name: RP11-16E18.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
391-407
0.039
1
LL22NC03-86G7.1
hsa-miR-767-5p
0.847
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000458178
Biotype: antisense
Gene id: ENSG00000224086
Gene Name: LL22NC03-86G7.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
18829-18851
0.005
8
7mer
33288-33305
0.004
0
8mer
7312-7335
0.003
0
7mer
29997-30013
0.003
1
7mer
23005-23031
0.003
5
7mer
18625-18644
0.002
1
7mer
6513-6531
0.002
1
7mer
16328-16354
0.002
0
7mer
29063-29088
0.002
0
6mer
10460-10476
0.001
0
6mer
5875-5898
0.001
1
6mer
14250-14270
0.001
0
6mer
17437-17457
0.001
3
8mer
5910-5933
0.001
0
6mer
15160-15179
0.001
1
6mer
11490-11511
0.001
0
6mer
12825-12851
0.001
Not Conserved
6mer
34827-34851
0.001
0
6mer
7946-7970
0.001
1
6mer
9825-9845
0.001
1
6mer
20738-20760
0.001
0
6mer
12543-12569
0.000
1
6mer
15198-15220
0.000
0
6mer
6030-6052
0.000
0
6mer
5998-6018
0.000
0
FAM215A
hsa-miR-767-5p
0.847
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: NR_026770.1
Biotype: sense
Gene id: NR_026770.1 (gene)
Gene Name: FAM215A
UCSC graphic: -
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
275-292
0.039
1
XLOC_000492
hsa-miR-767-5p
0.847
mTTBlnEmP

Gene Details
Chromosome: chr1
Transcript: TCONS_00001219
Biotype: transcript isomorph
Gene id: XLOC_000492
Gene Name: XLOC_000492
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Brain Normal/Primary
- Colon Normal/Primary
- Heart Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
199-221
0.039
0
C3orf65
hsa-miR-767-5p
0.846
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000296270
Biotype: antisense
Gene id: ENSG00000163915
Gene Name: C3orf65
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1459-1480
0.029
0
7mer
446-464
0.010
2
CTC-137K3.1
hsa-miR-767-5p
0.845
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000602328
Biotype: sense_intronic
Gene id: ENSG00000270137
Gene Name: CTC-137K3.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
555-577
0.038
0
RP1-257A7.4
hsa-miR-767-5p
0.843
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000606150
Biotype: antisense
Gene id: ENSG00000215022
Gene Name: RP1-257A7.4
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1946-1970
0.032
0
7mer
1683-1702
0.005
2
6mer
1580-1606
0.001
1
DKFZp434L192
hsa-miR-767-5p
0.841
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000566570
Biotype: lincRNA
Gene id: ENSG00000261275
Gene Name: DKFZp434L192
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1950-1974
0.014
1
8mer
887-910
0.014
1
6mer
184-200
0.007
1
6mer
479-501
0.002
0
6mer
1241-1261
0.001
Not Conserved
TMEM147-AS1
hsa-miR-767-5p
0.841
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000590125
Biotype: antisense
Gene id: ENSG00000236144
Gene Name: TMEM147-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
515-542
0.023
10
7mer
120-143
0.015
1
RP13-991F5.2
hsa-miR-767-5p
0.841
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000582249
Biotype: antisense
Gene id: ENSG00000266445
Gene Name: RP13-991F5.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
576-594
0.038
0
H19
hsa-miR-767-5p
0.841
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000447298
Biotype: lincRNA
Gene id: ENSG00000130600
Gene Name: H19
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
223-238
0.038
5
RP11-161I6.2
hsa-miR-767-5p
0.840
mTTBlnEmP

Gene Details
Chromosome: 18
Transcript: ENST00000585072
Biotype: lincRNA
Gene id: ENSG00000263745
Gene Name: RP11-161I6.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
314-330
0.038
2
FAM182A
hsa-miR-767-5p
0.840
mTTBlnEmP

Gene Details
Chromosome: 20
Transcript: ENST00000376398
Biotype: lincRNA
Gene id: ENSG00000125804
Gene Name: FAM182A
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
5044-5059
0.036
0
6mer
3027-3044
0.001
Not Conserved
6mer
2083-2108
0.001
Not Conserved
6mer
3065-3088
0.000
Not Conserved
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