LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-767-5p


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Gene
miRNA
Score
DIANA Links
XLOC_003406
hsa-miR-767-5p
0.876
mTTBlnEmP

Gene Details
Chromosome: chr3
Transcript: TCONS_00006773
Biotype: transcript isomorph
Gene id: XLOC_003406
Gene Name: XLOC_003406
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
- Brain Normal/Primary
- Breast Normal/Primary
HeLa Cervix Cancer/Malignant
- Colon Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
- Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
- Liver Normal/Primary
A549 Lung Cancer/Malignant
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
- Lymph Node Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary
LCLBAC - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
4465-4485
0.034
1
7mer
811-824
0.007
0
6mer
4270-4292
0.002
0
RP11-594N15.2
hsa-miR-767-5p
0.872
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000522302
Biotype: lincRNA
Gene id: ENSG00000254266
Gene Name: RP11-594N15.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
644-668
0.042
2
RP11-598F7.4
hsa-miR-767-5p
0.872
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000505893
Biotype: antisense
Gene id: ENSG00000249695
Gene Name: RP11-598F7.4
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
240-262
0.042
10
PARD6G-AS1
hsa-miR-767-5p
0.871
mTTBlnEmP

Gene Details
Chromosome: 18
Transcript: ENST00000586421
Biotype: antisense
Gene id: ENSG00000267270
Gene Name: PARD6G-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2358-2385
0.037
1
7mer
2130-2147
0.003
0
7mer
1111-1135
0.002
1
LOC100128288
hsa-miR-767-5p
0.870
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: NR_024447.1
Biotype: lincRNA
Gene id: NR_024447.1 (gene)
Gene Name: LOC100128288
UCSC graphic: -
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2091-2115
0.039
1
6mer
1315-1331
0.002
1
6mer
1263-1288
0.001
0
RP11-216L13.19
hsa-miR-767-5p
0.870
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000459985
Biotype: retained_intron
Gene id: ENSG00000273066
Gene Name: RP11-216L13.19
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
HepG2 Liver Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1845-1865
0.025
0
8mer
1156-1169
0.013
6
6mer
1335-1361
0.002
6
6mer
565-587
0.002
0
RP11-90L1.8
hsa-miR-767-5p
0.870
mTTBlnEmP

Gene Details
Chromosome: 13
Transcript: ENST00000611744
Biotype: antisense
Gene id: ENSG00000275880
Gene Name: RP11-90L1.8
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
598-625
0.015
0
7mer
520-541
0.011
0
7mer
556-577
0.010
0
8mer
1943-1961
0.006
0
CTD-2017D11.1
hsa-miR-767-5p
0.869
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000597683
Biotype: lincRNA
Gene id: ENSG00000268362
Gene Name: CTD-2017D11.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
636-660
0.042
0
AC006227.1
hsa-miR-767-5p
0.869
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000443123
Biotype: lincRNA
Gene id: ENSG00000229457
Gene Name: AC006227.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
155-177
0.042
0
LINC00366
hsa-miR-767-5p
0.866
mTTBlnEmP

Gene Details
Chromosome: 13
Transcript: ENST00000441430
Biotype: lincRNA
Gene id: ENSG00000229437
Gene Name: LINC00366
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
66-91
0.041
1
RP11-165H23.1
hsa-miR-767-5p
0.866
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: NR_109771.1
Biotype: lincRNA
Gene id: NR_109771.1 (gene)
Gene Name: RP11-165H23.1
UCSC graphic: -
Expression: -


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
410-425
0.031
2
6mer
454-472
0.007
8
6mer
869-879
0.003
1
RP11-165H23.1
hsa-miR-767-5p
0.866
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000566873
Biotype: lincRNA
Gene id: ENSG00000260995
Gene Name: RP11-165H23.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
410-425
0.031
2
6mer
454-472
0.007
8
6mer
869-879
0.003
1
RP11-234K24.3
hsa-miR-767-5p
0.865
mTTBlnEmP

Gene Details
Chromosome: 20
Transcript: ENST00000441208
Biotype: antisense
Gene id: ENSG00000232406
Gene Name: RP11-234K24.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
HepG2 Liver Cancer/Malignant


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
808-828
0.037
1
6mer
138-161
0.004
1
RP11-503L19.1
hsa-miR-767-5p
0.865
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000504874
Biotype: lincRNA
Gene id: ENSG00000250357
Gene Name: RP11-503L19.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
177-202
0.041
1
AC104777.1
hsa-miR-767-5p
0.864
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000421624
Biotype: lincRNA
Gene id: ENSG00000232359
Gene Name: AC104777.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
205-220
0.041
0
LINC01415
hsa-miR-767-5p
0.861
mTTBlnEmP

Gene Details
Chromosome: 18
Transcript: ENST00000587320
Biotype: lincRNA
Gene id: ENSG00000267325
Gene Name: LINC01415
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
3586-3608
0.041
0
XLOC_000794
hsa-miR-767-5p
0.861
mTTBlnEmP

Gene Details
Chromosome: chr1
Transcript: TCONS_00001468
Biotype: transcript isomorph
Gene id: XLOC_000794
Gene Name: XLOC_000794
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
65-83
0.040
1
CTD-3193O13.12
hsa-miR-767-5p
0.860
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000539278
Biotype: antisense
Gene id: ENSG00000214248
Gene Name: CTD-3193O13.12
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
114-140
0.017
4
7mer
4615-4641
0.013
1
6mer
142-163
0.006
5
6mer
820-840
0.003
5
6mer
4684-4701
0.002
0
XLOC_007135
hsa-miR-767-5p
0.859
mTTBlnEmP

Gene Details
Chromosome: chr8
Transcript: TCONS_00014559
Biotype: transcript isomorph
Gene id: XLOC_007135
Gene Name: XLOC_007135
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
K562 Blood Cancer/Malignant
- Brain Normal/Primary
- Breast Normal/Primary
HeLa Cervix Cancer/Malignant
- Colon Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
- Liver Normal/Primary
HepG2 Liver Cancer/Malignant
Fibroblasts Lung Normal/Primary
A549 Lung Cancer/Malignant
- Lung Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
381-407
0.033
1
7mer
644-669
0.007
1
LINC01111
hsa-miR-767-5p
0.856
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000518732
Biotype: lincRNA
Gene id: ENSG00000254300
Gene Name: LINC01111
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1390-1401
0.040
1
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