LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-767-5p


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Gene
miRNA
Score
DIANA Links
RP11-265N6.1
hsa-miR-767-5p
0.891
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000564805
Biotype: antisense
Gene id: ENSG00000261684
Gene Name: RP11-265N6.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
471-487
0.045
2
XLOC_007017
hsa-miR-767-5p
0.891
mTTBlnEmP

Gene Details
Chromosome: chr8
Transcript: TCONS_00014943
Biotype: transcript isomorph
Gene id: XLOC_007017
Gene Name: XLOC_007017
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Breast Normal/Primary


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
141-161
0.045
1
RP11-706O15.5
hsa-miR-767-5p
0.890
mTTBlnEmP

Gene Details
Chromosome: X
Transcript: ENST00000424415
Biotype: lincRNA
Gene id: ENSG00000205663
Gene Name: RP11-706O15.5
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
HMEpC Mammary Gland Normal/Primary


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
171-187
0.038
1
7mer
1303-1318
0.007
0
RP11-404P21.3
hsa-miR-767-5p
0.890
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000553638
Biotype: antisense
Gene id: ENSG00000258793
Gene Name: RP11-404P21.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
85-100
0.032
1
7mer
397-418
0.013
1
FAM95B1
hsa-miR-767-5p
0.887
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000588217
Biotype: lincRNA
Gene id: ENSG00000223839
Gene Name: FAM95B1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
596-623
0.044
0
RP11-678G14.4
hsa-miR-767-5p
0.885
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000594927
Biotype: lincRNA
Gene id: ENSG00000268240
Gene Name: RP11-678G14.4
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1616-1638
0.027
0
8mer
1156-1176
0.008
0
7mer
1406-1431
0.005
0
6mer
2033-2058
0.005
0
CYP4F26P
hsa-miR-767-5p
0.885
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000433357
Biotype: lincRNA
Gene id: ENSG00000226562
Gene Name: CYP4F26P
UCSC graphic:
Expression:
  Cell Line Tissue Category
HeLa Cervix Cancer/Malignant
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
436-457
0.044
1
RP11-191L9.4
hsa-miR-767-5p
0.883
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000438810
Biotype: lincRNA
Gene id: ENSG00000224271
Gene Name: RP11-191L9.4
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
494-513
0.041
1
6mer
33-59
0.003
0
CTD-2571L23.8
hsa-miR-767-5p
0.883
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000599924
Biotype: lincRNA
Gene id: ENSG00000268746
Gene Name: CTD-2571L23.8
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
176-196
0.044
0
XLOC_007429
hsa-miR-767-5p
0.883
mTTBlnEmP

Gene Details
Chromosome: chr9
Transcript: TCONS_00016034
Biotype: transcript isomorph
Gene id: XLOC_007429
Gene Name: XLOC_007429
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
224-242
0.044
3
PWRN1
hsa-miR-767-5p
0.882
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000569908
Biotype: lincRNA
Gene id: ENSG00000259905
Gene Name: PWRN1
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
- Kidney Normal/Primary
- Liver Normal/Primary
Fibroblasts Lung Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
96-115
0.044
1
ADAM20P1
hsa-miR-767-5p
0.882
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000556964
Biotype: lincRNA
Gene id: ENSG00000259158
Gene Name: ADAM20P1
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
473-490
0.044
6
XLOC_006850
hsa-miR-767-5p
0.881
mTTBlnEmP

Gene Details
Chromosome: chr8
Transcript: TCONS_00014769
Biotype: transcript isomorph
Gene id: XLOC_006850
Gene Name: XLOC_006850
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Kidney Normal/Primary
Fibroblasts Lung Normal/Primary


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1478-1489
0.043
1
XLOC_000294
hsa-miR-767-5p
0.881
mTTBlnEmP

Gene Details
Chromosome: chr1
Transcript: TCONS_00001027
Biotype: transcript isomorph
Gene id: XLOC_000294
Gene Name: XLOC_000294
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
- Kidney Normal/Primary
- Liver Normal/Primary
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
9144-9154
0.029
1
7mer
5874-5895
0.013
3
6mer
2851-2867
0.001
0
6mer
4994-5010
0.000
Not Conserved
XLOC_008323
hsa-miR-767-5p
0.880
mTTBlnEmP

Gene Details
Chromosome: chrY
Transcript: TCONS_00017647
Biotype: transcript isomorph
Gene id: XLOC_008323
Gene Name: XLOC_008323
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Brain Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Liver Normal/Primary
Fibroblasts Lung Normal/Primary
- Lung Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
507-532
0.043
0
CTC-360P9.2
hsa-miR-767-5p
0.879
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000590021
Biotype: lincRNA
Gene id: ENSG00000267684
Gene Name: CTC-360P9.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
365-387
0.043
14
RP5-1014D13.2
hsa-miR-767-5p
0.878
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000623726
Biotype: sense_overlapping
Gene id: ENSG00000279738
Gene Name: RP5-1014D13.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
196-216
0.013
Not Conserved
7mer
11696-11719
0.008
4
7mer
14827-14850
0.005
0
7mer
2836-2859
0.004
Not Conserved
8mer
15901-15920
0.004
0
8mer+wobble
18869-18887
0.002
1
7mer
3499-3524
0.002
Not Conserved
7mer
16660-16682
0.002
1
6mer
2118-2137
0.001
Not Conserved
6mer
6384-6400
0.001
0
6mer
11305-11321
0.001
0
6mer
11798-11821
0.001
3
RP11-468D11.1
hsa-miR-767-5p
0.878
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000509745
Biotype: lincRNA
Gene id: ENSG00000248137
Gene Name: RP11-468D11.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
34-51
0.043
1
RP11-510M2.1
hsa-miR-767-5p
0.877
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000567469
Biotype: lincRNA
Gene id: ENSG00000261348
Gene Name: RP11-510M2.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
168-192
0.043
2
RP11-161I6.2
hsa-miR-767-5p
0.876
mTTBlnEmP

Gene Details
Chromosome: 18
Transcript: ENST00000584867
Biotype: lincRNA
Gene id: ENSG00000263745
Gene Name: RP11-161I6.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
134-150
0.043
2
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