LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-767-5p


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Gene
miRNA
Score
DIANA Links
CTC-347C20.2
hsa-miR-767-5p
0.707
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000506293
Biotype: lincRNA
Gene id: ENSG00000248371
Gene Name: CTC-347C20.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
190-215
0.011
2
8mer
151-175
0.008
1
6mer
68-90
0.006
0
TTC28-AS1
hsa-miR-767-5p
0.707
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000417381
Biotype: antisense
Gene id: ENSG00000235954
Gene Name: TTC28-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
476-501
0.025
0
LINC00310
hsa-miR-767-5p
0.706
mTTBlnEmP

Gene Details
Chromosome: 21
Transcript: ENST00000428914
Biotype: lincRNA
Gene id: ENSG00000227456
Gene Name: LINC00310
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
403-424
0.025
1
RP11-1112C15.1
hsa-miR-767-5p
0.706
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000522992
Biotype: lincRNA
Gene id: ENSG00000205293
Gene Name: RP11-1112C15.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
233-260
0.025
0
CTA-941F9.10
hsa-miR-767-5p
0.706
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000623075
Biotype: sense_overlapping
Gene id: ENSG00000280383
Gene Name: CTA-941F9.10
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
13159-13173
0.007
1
7mer
2831-2855
0.004
0
8mer
15072-15093
0.004
5
7mer
17362-17389
0.004
2
6mer
8567-8587
0.002
1
6mer
945-962
0.002
0
6mer
20837-20860
0.001
1
6mer
3137-3154
0.001
Not Conserved
LINC00704
hsa-miR-767-5p
0.706
mTTBlnEmP

Gene Details
Chromosome: 10
Transcript: ENST00000430998
Biotype: lincRNA
Gene id: ENSG00000231298
Gene Name: LINC00704
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
HUVEC Blood Vessel Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1398-1413
0.022
1
8mer+mismatch
693-714
0.003
0
XLOC_006618
hsa-miR-767-5p
0.706
mTTBlnEmP

Gene Details
Chromosome: chr7
Transcript: TCONS_00013979
Biotype: transcript isomorph
Gene id: XLOC_006618
Gene Name: XLOC_006618
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
130-151
0.025
2
RP11-14K3.7
hsa-miR-767-5p
0.705
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000566449
Biotype: lincRNA
Gene id: ENSG00000259791
Gene Name: RP11-14K3.7
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
118-141
0.025
0
RP11-806L2.2
hsa-miR-767-5p
0.704
mTTBlnEmP

Gene Details
Chromosome: 18
Transcript: ENST00000585150
Biotype: antisense
Gene id: ENSG00000266456
Gene Name: RP11-806L2.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
779-804
0.013
4
7mer
452-475
0.012
1
AC011747.4
hsa-miR-767-5p
0.704
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000454224
Biotype: lincRNA
Gene id: ENSG00000236008
Gene Name: AC011747.4
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
8766-8783
0.009
4
7mer
1107-1130
0.005
1
7mer
5816-5843
0.004
0
7mer
4701-4726
0.003
1
6mer
3200-3219
0.001
0
6mer
4372-4394
0.001
0
6mer
7245-7266
0.001
0
6mer
4363-4381
0.001
1
CTC-436K13.6
hsa-miR-767-5p
0.703
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000523178
Biotype: lincRNA
Gene id: ENSG00000253449
Gene Name: CTC-436K13.6
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
342-362
0.025
7
RP11-401O9.3
hsa-miR-767-5p
0.703
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000577743
Biotype: antisense
Gene id: ENSG00000264067
Gene Name: RP11-401O9.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
263-288
0.025
0
RP11-23J9.4
hsa-miR-767-5p
0.703
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000375206
Biotype: processed_transcript
Gene id: ENSG00000255036
Gene Name: RP11-23J9.4
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
140-166
0.015
3
6mer
1291-1315
0.003
3
6mer
942-966
0.002
5
6mer
1536-1557
0.002
7
6mer
312-337
0.002
1
7mer
2943-2967
0.001
1
MIR7515HG
hsa-miR-767-5p
0.703
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000593202
Biotype: lincRNA
Gene id: ENSG00000236172
Gene Name: MIR7515HG
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
149-166
0.025
7
COLCA1
hsa-miR-767-5p
0.703
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000620864
Biotype: antisense
Gene id: ENSG00000196167
Gene Name: COLCA1
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
8020-8046
0.020
1
7mer
1227-1247
0.005
1
XLOC_013779
hsa-miR-767-5p
0.703
mTTBlnEmP

Gene Details
Chromosome: chr20
Transcript: TCONS_00028429
Biotype: transcript isomorph
Gene id: XLOC_013779
Gene Name: XLOC_013779
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
3053-3078
0.012
1
6mer
3000-3024
0.004
1
6mer
2891-2909
0.003
1
6mer
285-301
0.002
Not Conserved
6mer
1115-1139
0.002
0
6mer
1274-1299
0.001
0
THUMPD3-AS1
hsa-miR-767-5p
0.702
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000521267
Biotype: antisense
Gene id: ENSG00000206573
Gene Name: THUMPD3-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
468-494
0.019
1
6mer
107-128
0.005
2
XLOC_003202
hsa-miR-767-5p
0.702
mTTBlnEmP

Gene Details
Chromosome: chr3
Transcript: TCONS_00006580
Biotype: transcript isomorph
Gene id: XLOC_003202
Gene Name: XLOC_003202
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
- Heart Normal/Primary
- Kidney Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
948-967
0.009
0
6mer
4256-4280
0.006
3
7mer
1516-1540
0.006
1
6mer
739-758
0.002
Not Conserved
6mer
1222-1248
0.001
1
RP13-60M5.2
hsa-miR-767-5p
0.702
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000418343
Biotype: lincRNA
Gene id: ENSG00000228189
Gene Name: RP13-60M5.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
995-1011
0.025
0
AC013472.3
hsa-miR-767-5p
0.702
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000380387
Biotype: antisense
Gene id: ENSG00000205500
Gene Name: AC013472.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1694-1716
0.010
1
8mer
1556-1572
0.009
1
7mer
566-593
0.005
0
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