LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-767-5p


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Gene
miRNA
Score
DIANA Links
XLOC_013543
hsa-miR-767-5p
0.717
mTTBlnEmP

Gene Details
Chromosome: chr20
Transcript: TCONS_00028193
Biotype: transcript isomorph
Gene id: XLOC_013543
Gene Name: XLOC_013543
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Ovary Normal/Primary
- Testes Normal/Primary
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
233-258
0.006
0
6mer
3920-3945
0.004
1
6mer
3879-3892
0.004
1
6mer
3659-3684
0.003
0
6mer
287-311
0.003
0
6mer
3453-3470
0.002
0
6mer
3070-3094
0.001
Not Conserved
6mer
2186-2202
0.001
Not Conserved
6mer
1962-1987
0.001
Not Conserved
6mer
1718-1731
0.001
Not Conserved
6mer
2427-2450
0.001
Not Conserved
6mer
2017-2043
0.000
Not Conserved
6mer
2003-2018
0.000
Not Conserved
AC005154.6
hsa-miR-767-5p
0.716
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000584621
Biotype: antisense
Gene id: ENSG00000196295
Gene Name: AC005154.6
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1887-1912
0.013
1
7mer
1220-1244
0.008
1
7mer
895-916
0.005
1
MBNL1-AS1
hsa-miR-767-5p
0.715
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000608395
Biotype: antisense
Gene id: ENSG00000229619
Gene Name: MBNL1-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
HUVEC Blood Vessel Normal/Primary
HeLa Cervix Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
3804-3830
0.017
2
7mer
5042-5068
0.005
2
6mer
4674-4686
0.002
3
6mer
4011-4030
0.001
3
XLOC_000191
hsa-miR-767-5p
0.715
mTTBlnEmP

Gene Details
Chromosome: chr1
Transcript: TCONS_00000939
Biotype: transcript isomorph
Gene id: XLOC_000191
Gene Name: XLOC_000191
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1929-1945
0.022
0
6mer
823-847
0.004
0
RP3-329E20.2
hsa-miR-767-5p
0.715
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000416959
Biotype: antisense
Gene id: ENSG00000236936
Gene Name: RP3-329E20.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
586-609
0.026
1
XLOC_009628
hsa-miR-767-5p
0.715
mTTBlnEmP

Gene Details
Chromosome: chr12
Transcript: TCONS_00020283
Biotype: transcript isomorph
Gene id: XLOC_009628
Gene Name: XLOC_009628
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
Fibroblasts Lung Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
6540-6557
0.010
Not Conserved
7mer
4802-4820
0.005
4
7mer
4209-4235
0.003
2
6mer
7116-7143
0.002
Not Conserved
6mer
3870-3892
0.001
0
6mer
2975-2990
0.001
2
7mer
3515-3538
0.001
0
6mer
2308-2328
0.001
4
6mer
6555-6577
0.001
Not Conserved
DKFZp686K1684
hsa-miR-767-5p
0.714
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: NR_033971.1
Biotype: sense
Gene id: NR_033971.1 (gene)
Gene Name: DKFZp686K1684
UCSC graphic: -
Expression: -


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
133-159
0.021
3
7mer
702-726
0.004
0
DGCR9
hsa-miR-767-5p
0.713
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000609630
Biotype: lincRNA
Gene id: ENSG00000273032
Gene Name: DGCR9
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
714-739
0.013
0
7mer
1588-1608
0.010
0
6mer
536-556
0.003
0
XLOC_012676
hsa-miR-767-5p
0.713
mTTBlnEmP

Gene Details
Chromosome: chr18
Transcript: TCONS_00026329
Biotype: transcript isomorph
Gene id: XLOC_012676
Gene Name: XLOC_012676
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
290-310
0.026
0
RP11-578B16.1
hsa-miR-767-5p
0.711
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000615679
Biotype: sense_intronic
Gene id: ENSG00000277223
Gene Name: RP11-578B16.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
111-132
0.025
4
RP11-493L12.4
hsa-miR-767-5p
0.711
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000547777
Biotype: lincRNA
Gene id: ENSG00000258181
Gene Name: RP11-493L12.4
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
HREpiC Kidney Normal/Primary
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
176-195
0.025
1
CTC-347C20.2
hsa-miR-767-5p
0.710
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000512573
Biotype: lincRNA
Gene id: ENSG00000248371
Gene Name: CTC-347C20.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
190-215
0.011
2
8mer
151-175
0.008
1
6mer
68-90
0.007
0
AC079790.2
hsa-miR-767-5p
0.710
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000420365
Biotype: antisense
Gene id: ENSG00000225214
Gene Name: AC079790.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
18-33
0.013
8
6mer
54-75
0.013
8
LL22NC03-22D1.1
hsa-miR-767-5p
0.709
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000624601
Biotype: lincRNA
Gene id: ENSG00000279003
Gene Name: LL22NC03-22D1.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
28143-28166
0.012
0
7mer
7818-7836
0.003
1
7mer
10233-10244
0.003
1
7mer
12552-12578
0.002
1
6mer
26489-26506
0.001
2
6mer
14768-14791
0.001
1
6mer
5822-5843
0.001
0
6mer
3751-3773
0.001
1
6mer
20200-20221
0.001
Not Conserved
XLOC_010073
hsa-miR-767-5p
0.709
mTTBlnEmP

Gene Details
Chromosome: chr12
Transcript: TCONS_00021310
Biotype: transcript isomorph
Gene id: XLOC_010073
Gene Name: XLOC_010073
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Lung Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
436-459
0.025
2
XLOC_013778
hsa-miR-767-5p
0.709
mTTBlnEmP

Gene Details
Chromosome: chr20
Transcript: TCONS_00028426
Biotype: transcript isomorph
Gene id: XLOC_013778
Gene Name: XLOC_013778
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
4033-4058
0.002
0
6mer
76-101
0.002
0
7mer
969-994
0.002
1
6mer
287-304
0.002
Not Conserved
6mer
439-464
0.002
0
7mer
4432-4457
0.001
Not Conserved
7mer
1220-1245
0.001
1
6mer
1075-1087
0.001
1
7mer
2627-2652
0.001
Not Conserved
6mer
1468-1493
0.001
1
6mer
4485-4510
0.001
0
6mer
2155-2171
0.001
Not Conserved
6mer
4139-4155
0.001
Not Conserved
6mer
4696-4721
0.001
Not Conserved
6mer
5400-5424
0.001
0
6mer
3874-3898
0.001
0
6mer
1022-1047
0.001
0
6mer
1322-1339
0.001
Not Conserved
6mer
1273-1289
0.001
1
6mer
2789-2814
0.001
Not Conserved
6mer
1892-1913
0.000
Not Conserved
6mer
2575-2588
0.000
Not Conserved
6mer
2051-2075
0.000
Not Conserved
6mer
2102-2126
0.000
Not Conserved
6mer
1998-2023
0.000
Not Conserved
RP11-556E13.1
hsa-miR-767-5p
0.708
mTTBlnEmP

Gene Details
Chromosome: 10
Transcript: ENST00000443523
Biotype: antisense
Gene id: ENSG00000228651
Gene Name: RP11-556E13.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
HepG2 Liver Cancer/Malignant


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
240-259
0.025
3
LINC00836
hsa-miR-767-5p
0.708
mTTBlnEmP

Gene Details
Chromosome: 10
Transcript: NR_108067.1
Biotype: lincRNA
Gene id: NR_108067.1 (gene)
Gene Name: LINC00836
UCSC graphic: -
Expression: -


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
179-202
0.019
4
6mer
190-216
0.004
2
6mer
428-446
0.002
Not Conserved
CTD-3051D23.1
hsa-miR-767-5p
0.708
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000556430
Biotype: lincRNA
Gene id: ENSG00000258811
Gene Name: CTD-3051D23.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
2453-2474
0.013
1
7mer
1840-1855
0.007
1
6mer
2102-2127
0.003
1
6mer
735-761
0.002
0
LINC00955
hsa-miR-767-5p
0.707
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000514422
Biotype: lincRNA
Gene id: ENSG00000216560
Gene Name: LINC00955
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-767-5p
Sequence: ugcaccaugguugucugagcaug
MirBase ID: MIMAT0003882
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1147-1173
0.011
Not Conserved
7mer
245-272
0.006
Not Conserved
7mer
315-335
0.003
Not Conserved
7mer
332-353
0.003
Not Conserved
6mer
286-303
0.001
Not Conserved
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